Homologs of GFF4561 from Variovorax sp. SCN45

Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27)
SEED: Domain often clustered or fused with uracil-DNA glycosylase
KEGG: DNA polymerase bacteriophage-type

86 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4561 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) insig. 100 100
o Variovorax sp. OAS795 ABID97_RS06035 UdgX family uracil-DNA binding protein insig. 80 94
o Caulobacter crescentus NA1000 CCNA_02418 uracil DNA glycosylase superfamily protein insig. 51 93
o Caulobacter crescentus NA1000 Δfur CCNA_02418 uracil DNA glycosylase superfamily protein cofit 51 93
o Rhodopseudomonas palustris CGA009 TX73_009255 UdgX family uracil-DNA binding protein insig. 50 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08605 UdgX family uracil-DNA binding protein insig. 50 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4642.1 DNA polymerase related protein insig. 50 93
o Sphingobium sp. HT1-2 GFF4791 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) cofit 53 80
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3857 uracil-DNA glycosylase, family 4 insig. 47 95
o Bosea sp. OAE506 ABIE41_RS13095 UdgX family uracil-DNA binding protein insig. 48 93
o Agrobacterium fabrum C58 Atu2180 hypothetical protein insig. 49 86
o Rhizobium sp. OAE497 ABIE40_RS12830 UdgX family uracil-DNA binding protein insig. 46 91
o Phaeobacter inhibens DSM 17395 PGA1_262p00560 uracil DNA glycosylase-like protein insig. 48 89
o Azospirillum brasilense Sp245 AZOBR_RS24640 uracil-DNA glycosylase insig. 49 91
o Azospirillum sp. SherDot2 MPMX19_06715 hypothetical protein insig. 46 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05148 DNA polymerase insig. 39 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS06950 UdgX family uracil-DNA binding protein insig. 40 88
o Burkholderia phytofirmans PsJN BPHYT_RS11605 DNA polymerase insig. 41 92
o Pseudomonas sp. S08-1 OH686_10960 Domain often clustered or fused with uracil-DNA glycosylase insig. 41 89
  Variovorax sp. OAS795 ABID97_RS16270 UdgX family uracil-DNA binding protein insig. 66 40
  Lysobacter sp. OAE881 ABIE51_RS09140 UdgX family uracil-DNA binding protein insig. 51 41
  Alteromonas macleodii MIT1002 MIT1002_02413 putative DNA metabolism protein insig. 38 50
  Sinorhizobium meliloti 1021 SM_b21448 DNA polymerase related protein insig. 50 38
  Ralstonia sp. UNC404CL21Col ABZR87_RS22620 UdgX family uracil-DNA binding protein insig. 55 38
  Rhizobium sp. OAE497 ABIE40_RS28635 UdgX family uracil-DNA binding protein insig. 48 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03025 UdgX family uracil-DNA binding protein insig. 49 38
  Paraburkholderia graminis OAS925 ABIE53_006002 uracil-DNA glycosylase family protein sig. 53 37
  Paraburkholderia graminis OAS925 ABIE53_005107 putative DNA metabolism protein insig. 33 71
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02785 DNA polymerase insig. 53 37
  Paraburkholderia sabiae LMG 24235 QEN71_RS09940 UdgX family uracil-DNA binding protein insig. 53 38
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4924.1 Uracil-DNA glycosylase, putative family 6 insig. 46 42
  Burkholderia phytofirmans PsJN BPHYT_RS29730 uracil-DNA glycosylase insig. 41 50
  Pseudomonas stutzeri RCH2 Psest_0287 probable DNA metabolism protein insig. 38 51
  Pseudomonas sp. DMC3 GFF1603 hypothetical protein insig. 34 51
  Pseudomonas fluorescens FW300-N2C3 AO356_01930 hypothetical protein insig. 36 48
  Pseudomonas orientalis W4I3 QF045_RS19125 TIGR03915 family putative DNA repair protein cofit 34 53
  Pseudomonas sp. BP01 JOY50_RS24580 TIGR03915 family putative DNA repair protein insig. 34 52
  Pseudomonas simiae WCS417 PS417_17615 leucyl-tRNA synthetase insig. 35 51
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03816 hypothetical protein cofit 33 54
  Pseudomonas sp. RS175 PFR28_01196 hypothetical protein insig. 35 52
  Pseudomonas putida KT2440 PP_2923 conserved protein of unknown function insig. 32 54
  Pseudomonas syringae pv. syringae B728a Psyr_2364 conserved hypothetical protein insig. 33 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2364 conserved hypothetical protein insig. 33 53
  Azospirillum brasilense Sp245 AZOBR_RS17365 uracil-DNA glycosylase no data 40 41
  Pseudomonas fluorescens SBW25 PFLU_RS19405 DNA metabolism protein insig. 33 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19405 DNA metabolism protein insig. 33 51
  Azospirillum sp. SherDot2 MPMX19_06101 hypothetical protein no data 42 35
  Synechococcus elongatus PCC 7942 Synpcc7942_2543 phage SPO1 DNA polymerase-related protein insig. 38 43
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00940 uracil-DNA glycosylase no data 42 35
  Rhodospirillum rubrum S1H Rru_A0266 Phage SPO1 DNA polymerase-related protein (NCBI) no data 39 36
  Rhodopseudomonas palustris CGA009 TX73_005325 uracil-DNA glycosylase no data 38 35
  Ralstonia sp. UNC404CL21Col ABZR87_RS11655 uracil-DNA glycosylase no data 38 41
  Herbaspirillum seropedicae SmR1 HSERO_RS10725 DNA polymerase III no data 37 38
  Ralstonia solanacearum GMI1000 RS_RS06865 uracil-DNA glycosylase no data 40 36
  Ralstonia solanacearum PSI07 RPSI07_RS17285 uracil-DNA glycosylase no data 40 36
  Xanthobacter sp. DMC5 GFF1960 hypothetical protein no data 37 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00195 uracil-DNA glycosylase no data 40 35
  Ralstonia solanacearum UW163 UW163_RS13525 uracil-DNA glycosylase no data 40 35
  Phaeobacter inhibens DSM 17395 PGA1_c03070 putative uracil DNA glycosylase no data 39 36
  Burkholderia phytofirmans PsJN BPHYT_RS12260 DNA polymerase no data 39 41
  Paraburkholderia sabiae LMG 24235 QEN71_RS06295 uracil-DNA glycosylase no data 40 32
  Cupriavidus basilensis FW507-4G11 RR42_RS12050 DNA polymerase strong 41 31
  Paraburkholderia graminis OAS925 ABIE53_002531 uracil-DNA glycosylase family 4 no data 40 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00585 DNA polymerase no data 38 36
  Magnetospirillum magneticum AMB-1 AMB_RS22455 uracil-DNA glycosylase no data 35 36
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2765 Uracil-DNA glycosylase, family 4 no data 37 36
  Dechlorosoma suillum PS Dsui_2405 uracil-DNA glycosylase, family 4 no data 37 36
  Caulobacter crescentus NA1000 CCNA_01394 uracil DNA glycosylase superfamily protein no data 37 35
  Caulobacter crescentus NA1000 Δfur CCNA_01394 uracil DNA glycosylase superfamily protein no data 37 35
  Bosea sp. OAE506 ABIE41_RS22785 uracil-DNA glycosylase no data 37 36
  Agrobacterium fabrum C58 Atu0987 DNA polymerase no data 33 36
  Dinoroseobacter shibae DFL-12 Dshi_3090 phage SPO1 DNA polymerase-related protein (RefSeq) no data 36 38
  Sinorhizobium meliloti 1021 SMc02375 hypothetical protein no data 35 35
  Rhizobium sp. OAE497 ABIE40_RS05745 uracil-DNA glycosylase no data 31 35
  Burkholderia phytofirmans PsJN BPHYT_RS29730 uracil-DNA glycosylase insig. 29 36
  Castellaniella sp019104865 MT123 ABCV34_RS08575 uracil-DNA glycosylase family protein no data 36 33
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13655 DNA metabolism protein strong 34 26
  Azospirillum sp. SherDot2 MPMX19_00572 Type-4 uracil-DNA glycosylase insig. 35 29
  Cellulophaga baltica 18 M666_RS15465 TIGR03915 family putative DNA repair protein insig. 27 30
  Azospirillum brasilense Sp245 AZOBR_RS05400 DNA polymerase insig. 32 30
  Bacteroides stercoris CC31F HMPREF1181_RS13795 TIGR03915 family putative DNA repair protein insig. 26 35
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4210 Uracil-DNA glycosylase no data 29 31
  Bacteroides ovatus ATCC 8483 BACOVA_05289 putative DNA metabolism protein insig. 26 41
  Acinetobacter baumannii LAC-4 RR41_RS01965 TIGR03915 family putative DNA repair protein insig. 23 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21820 DNA metabolism protein insig. 23 30
  Bacteroides thetaiotaomicron VPI-5482 BT4483 conserved hypothetical protein (NCBI ptt file) insig. 25 37