Homologs of GFF4286 from Xanthobacter sp. DMC5

Phytochrome-like protein cph1
SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF4286 Phytochrome-like protein cph1 insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS26950 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 51 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15480 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 49 97
o Rhodopseudomonas palustris CGA009 TX73_015620 ATP-binding protein insig. 33 89
o Azospirillum sp. SherDot2 MPMX19_04272 Phytochrome-like protein cph1 insig. 33 92
  Agrobacterium fabrum C58 Atu2165 bacteriophytochrome protein insig. 33 93
  Rhodopseudomonas palustris CGA009 TX73_005095 HWE histidine kinase domain-containing protein insig. 35 93
  Rhizobium sp. OAE497 ABIE40_RS14515 HWE histidine kinase domain-containing protein insig. 33 97
o Azospirillum brasilense Sp245 AZOBR_RS30160 chemotaxis protein CheY insig. 34 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03395 ATP-binding protein strong 29 92
o Sphingobium sp. HT1-2 GFF5140 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 32 98
o Pseudomonas putida KT2440 PP_2356 putative Phytochrome family protein strong 32 91
o Synechocystis sp000284455 PCC 6803 SGL_RS14030 ATP-binding protein cofit 31 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01748 Bacteriophytochrome (light-regulated signal transduction histidine kinase) strong 33 87
o Pseudomonas sp. BP01 JOY50_RS10835 ATP-binding protein insig. 33 91
  Sphingobium sp. HT1-2 GFF650 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 33 95
  Rhodopseudomonas palustris CGA009 TX73_015615 ATP-binding protein insig. 32 92
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5288.1 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) insig. 37 66
  Phaeobacter inhibens DSM 17395 PGA1_c28680 putative bacteriophytochrome insig. 32 94
o Pseudomonas syringae pv. syringae B728a Psyr_3504 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 30 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3504 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 30 91
o Pseudomonas sp. DMC3 GFF1005 Phytochrome-like protein cph1 cofit 30 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04813 Phytochrome-like protein cph1 cofit 29 97
o Pseudomonas orientalis W4I3 QF045_RS25570 ATP-binding protein cofit 31 98
o Pseudomonas stutzeri RCH2 Psest_4345 Bacteriophytochrome (light-regulated signal transduction histidine kinase) strong 32 91
o Pseudomonas simiae WCS417 PS417_23325 histidine kinase insig. 30 97
  Agrobacterium fabrum C58 Atu1990 bacteriophytochrome protein insig. 34 75
o Pseudomonas fluorescens SBW25 PFLU_RS25130 GAF domain-containing protein insig. 30 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25130 GAF domain-containing protein sig. 30 97
  Bosea sp. OAE506 ABIE41_RS08275 HWE histidine kinase domain-containing protein insig. 33 88
  Pseudomonas sp. BP01 JOY50_RS14150 HWE histidine kinase domain-containing protein insig. 31 97
  Azospirillum brasilense Sp245 AZOBR_RS30860 sensor histidine kinase strong 35 75
o Pseudomonas fluorescens FW300-N2C3 AO356_09865 histidine kinase sig. 31 87
  Pseudomonas putida KT2440 PP_3364 Response regulator insig. 31 97
  Burkholderia phytofirmans PsJN BPHYT_RS06325 ATPase strong 37 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS10565 ATP-binding protein cofit 34 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3852 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) sig. 33 73
o Herbaspirillum seropedicae SmR1 HSERO_RS12460 light-regulated signal transduction histidine kinase insig. 30 97
o Variovorax sp. SCN45 GFF1412 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) insig. 32 91
  Azospirillum sp. SherDot2 MPMX19_01598 hypothetical protein insig. 33 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08760 histidine kinase strong 27 88
  Variovorax sp. SCN45 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 32 93
  Pseudomonas sp. RS175 PFR28_04918 Phytochrome-like protein cph1 insig. 34 73
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05925 hypothetical protein cofit 29 97
  Pseudomonas syringae pv. syringae B728a Psyr_2385 Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase insig. 30 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2385 Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase insig. 30 92
  Lysobacter sp. OAE881 ABIE51_RS17880 GAF domain-containing protein insig. 34 75
  Rhodopseudomonas palustris CGA009 TX73_000630 ATP-binding protein insig. 32 81
  Rhodopseudomonas palustris CGA009 TX73_007660 GAF domain-containing protein cofit 33 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08315 PAS sensor protein sig. 30 67
  Rhodospirillum rubrum S1H Rru_A2235 Multi-sensor Signal Transduction Histidine Kinase (NCBI) strong 35 65
  Alteromonas macleodii MIT1002 MIT1002_02965 Phytochrome-like protein cph1 insig. 27 72
  Pseudomonas aeruginosa MRSN321 DY961_RS28065 bphP;inference=COORDINATES bacteriophytochrome BphP insig. 32 67
  Pseudomonas aeruginosa PUPa3 DQ20_RS47575 bphP;inference=COORDINATES bacteriophytochrome BphP insig. 32 67
  Magnetospirillum magneticum AMB-1 AMB_RS16825 hypothetical protein insig. 32 66
  Pseudomonas aeruginosa PA14 IKLFDK_21205 bacteriophytochrome BphP insig. 32 67
  Alteromonas macleodii MIT1002 MIT1002_03619 Phytochrome-like protein cph1 insig. 27 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS02225 ATP-binding protein strong 27 80
  Agrobacterium fabrum C58 Atu1984 two component sensor kinase insig. 35 30
  Azospirillum sp. SherDot2 MPMX19_02386 hypothetical protein insig. 33 31
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09740 histidine kinase dimerization/phosphoacceptor domain -containing protein strong 40 25
  Rhodopseudomonas palustris CGA009 TX73_012580 histidine kinase dimerization/phosphoacceptor domain -containing protein cofit 37 27
  Rhizobium sp. OAE497 ABIE40_RS11240 response regulator cofit 39 24
  Bosea sp. OAE506 ABIE41_RS11565 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 39 26
  Desulfovibrio vulgaris Hildenborough JW710 DVU0888 response regulator (TIGR) sig. 36 27
  Azospirillum sp. SherDot2 MPMX19_05613 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 35 27
  Rhodospirillum rubrum S1H Rru_A0664 Signal Transduction Histidine Kinase (NCBI) insig. 39 24
  Xanthobacter sp. DMC5 GFF1743 Sensor histidine kinase RcsC insig. 38 23
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19195 hypothetical protein insig. 31 31
  Cellulophaga baltica 18 M666_RS20120 sensor histidine kinase cofit 28 30
  Azospirillum brasilense Sp245 AZOBR_RS26870 chemotaxis protein CheY insig. 33 27
  Azospirillum brasilense Sp245 AZOBR_RS20805 hypothetical protein strong 38 26
  Xanthobacter sp. DMC5 GFF4115 hypothetical protein insig. 35 26
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01560 histidine kinase dimerization/phosphoacceptor domain -containing protein cofit 31 29
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14770 sensor histidine kinase no data 32 27
  Rhodospirillum rubrum S1H Rru_A3288 Signal Transduction Histidine Kinase (NCBI) no data 39 21
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0504 Signal transduction histidine kinase insig. 29 31
  Bosea sp. OAE506 ABIE41_RS11385 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 32 27
  Azospirillum brasilense Sp245 AZOBR_RS26000 histidine kinase strong 37 22
  Azospirillum sp. SherDot2 MPMX19_06307 hypothetical protein insig. 33 28
  Dinoroseobacter shibae DFL-12 Dshi_3834 signal transduction histidine kinase (RefSeq) insig. 32 29
  Synechocystis sp000284455 PCC 6803 SGL_RS06075 PAS domain S-box protein insig. 28 31
  Cellulophaga baltica 18 M666_RS13720 sensor histidine kinase strong 36 19
  Rhodopseudomonas palustris CGA009 TX73_006780 sensor histidine kinase insig. 34 27
  Bosea sp. OAE506 ABIE41_RS06935 CHASE3 domain-containing protein insig. 31 32
  Caulobacter crescentus NA1000 CCNA_03588 two-component sensor histidine kinase PhyK strong 31 27
  Caulobacter crescentus NA1000 Δfur CCNA_03588 two-component sensor histidine kinase PhyK cofit 31 27
  Azospirillum brasilense Sp245 AZOBR_RS26960 hypothetical protein insig. 33 31
  Cellulophaga baltica 18 M666_RS10530 sensor histidine kinase strong 29 28
  Synechocystis sp000284455 PCC 6803 SGL_RS15220 diguanylate cyclase insig. 28 47
  Bosea sp. OAE506 ABIE41_RS23040 PAS domain-containing sensor histidine kinase insig. 33 27
  Bosea sp. OAE506 ABIE41_RS00490 PAS domain-containing protein insig. 32 25
  Cellulophaga baltica 18 M666_RS12535 sensor histidine kinase insig. 30 22
  Azospirillum brasilense Sp245 AZOBR_RS02955 histidine kinase insig. 30 32
  Azospirillum sp. SherDot2 MPMX19_02870 Serine/threonine-protein kinase PknD insig. 34 27
  Azospirillum sp. SherDot2 MPMX19_04972 hypothetical protein insig. 33 30
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10270 histidine kinase dimerization/phosphoacceptor domain -containing protein cofit 36 26
  Desulfovibrio vulgaris Miyazaki F DvMF_1419 signal transduction histidine kinase (RefSeq) cofit 32 24
  Bifidobacterium breve UCC2003 BBR_RS14175 Sensory transduction protein kinase no data 30 32
  Rhodopseudomonas palustris CGA009 TX73_016065 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 34 24