| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF3854 | | hypothetical protein | insig. | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_04133 | | Transcriptional regulatory protein tctD | insig. | 64 | 99 |
| | Sphingobium sp. HT1-2 | GFF2757 | | Response regulator receiver | cofit | 55 | 100 |
| | Rhizobium sp. OAE497 | ABIE40_RS16445 | | response regulator transcription factor | insig. | 48 | 99 |
| | Methylophilus sp. DMC18 | GFF801 | | Transcriptional regulatory protein QseB | insig. | 45 | 100 |
| | Variovorax sp. OAS795 | ABID97_RS28875 | | response regulator transcription factor | insig. | 52 | 99 |
| | Rahnella sp. WP5 | EX31_RS08605 | | two-component system response regulator PmrA | insig. | 47 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS13215 | | transcriptional regulator | insig. | 48 | 100 |
| | Dechlorosoma suillum PS | Dsui_0266 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 49 | 99 |
| | Agrobacterium fabrum C58 | Atu2466 | | two component response regulator | insig. | 45 | 99 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1263 | | Response regulator receiver:Transcriptional regulatory protein, C- terminal | cofit | 48 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_0204 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 50 | 100 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01565 | | Transcriptional regulatory protein tctD | cofit | 49 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS06905 | | response regulator | sig. | 48 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_00295 | | Transcriptional regulatory protein QseB | insig. | 50 | 99 |
| | Rhizobium sp. OAE497 | ABIE40_RS23395 | | response regulator | insig. | 48 | 99 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_14180 | | DNA-binding response regulator | strong | 48 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02330 | | response regulator transcription factor | strong | 48 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2498 | | Response regulator receiver:Transcriptional regulatory protein, C- terminal | strong | 48 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3235 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 47 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS16490 | | response regulator | insig. | 48 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16365 | | transcriptional regulator | insig. | 48 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS09800 | | response regulator | insig. | 49 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07160 | | response regulator | strong | 49 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07160 | | response regulator | strong | 49 | 100 |
| | Pseudomonas simiae WCS417 | PS417_07085 | | transcriptional regulator | strong | 49 | 100 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09380 | | response regulator transcription factor | strong | 47 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS02285 | | response regulator transcription factor | strong | 47 | 98 |
| | Variovorax sp. SCN45 | GFF5388 | | Two-component response regulatory protein BP2547 | insig. | 47 | 98 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16950 | | transcriptional regulator | insig. | 46 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22665 | | transcriptional regulator | insig. | 45 | 100 |
| | Klebsiella michiganensis M5al | BWI76_RS08795 | | DNA-binding response regulator | sig. | 44 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08725 | | response regulator | strong | 49 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03230 | | DNA-binding response regulator | strong | 49 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44125 | | response regulator | strong | 49 | 100 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03075 | | transcriptional regulator | strong | 48 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17590 | | transcriptional regulator | strong | 48 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16220 | | transcriptional regulator | no data | 47 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04209 | | two component transcriptional regulator, winged helix family | strong | 47 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4524 | | Tricarboxylate transport transcriptional regulator TctD | strong | 49 | 100 |
| | Pseudomonas sp. DMC3 | GFF2271 | | Transcriptional regulatory protein tctD | cofit | 48 | 100 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS00170 | | transcriptional regulator TctD | cofit | 48 | 100 |
| | Pseudomonas sp. S08-1 | OH686_20005 | | Tricarboxylate transport transcriptional regulator TctD | strong | 48 | 100 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS12650 | | response regulator | insig. | 48 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | sig. | 47 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07960 | | response regulator transcription factor | strong | 47 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_17065 | | two-component system response regulator PmrA | insig. | 44 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS14630 | | response regulator | insig. | 48 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_003449 | | two-component system OmpR family response regulator | strong | 48 | 98 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3965 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | strong | 47 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3965 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 47 | 100 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS07045 | | response regulator | insig. | 46 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS02695 | | response regulator | strong | 45 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_003418 | | two-component system response regulator QseB | strong | 47 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04078 | | Virulence transcriptional regulatory protein PhoP | insig. | 49 | 99 |
| | Pseudomonas sp. RS175 | PFR28_00683 | | Transcriptional regulatory protein tctD | strong | 47 | 100 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS02945 | | response regulator | strong | 45 | 99 |
| | Sinorhizobium meliloti 1021 | SM_b20722 | | two-component response regulator protein | insig. | 46 | 99 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13870 | | response regulator transcription factor | insig. | 46 | 98 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1026.1 | | Tricarboxylate transport transcriptional regulator TctD | cofit | 46 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2765 | | Tricarboxylate transport transcriptional regulator TctD | sig. | 48 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_04087 | | Transcriptional regulatory protein BasR | strong | 47 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04610 | | transcriptional regulator | insig. | 48 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12630 | | chemotaxis protein CheY | insig. | 44 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3316 | | Tricarboxylate transport transcriptional regulator TctD | sig. | 48 | 100 |
| | Pseudomonas putida KT2440 | PP_1420 | | Transcriptional regulatory protein tctD | strong | 47 | 99 |
| | Sinorhizobium meliloti 1021 | SMc00458 | | transcriptional regulator | strong | 45 | 100 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS03230 | | transcriptional regulator | strong | 47 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21985 | | transcriptional regulator | insig. | 44 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS18500 | | response regulator transcription factor | strong | 43 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1469 | | Transcriptional regulatory protein basR/pmrA | cofit | 44 | 100 |
| | Variovorax sp. SCN45 | GFF3775 | | Two-component transcriptional response regulator, OmpR family | insig. | 47 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_03119 | | Transcriptional regulatory protein QseB | insig. | 44 | 100 |
| | Methylophilus sp. DMC18 | GFF2662 | | Transcriptional regulatory protein QseB | insig. | 40 | 100 |
| | Pseudomonas stutzeri RCH2 | Psest_3476 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 45 | 99 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3124 | | two component transcriptional regulator, winged helix family (RefSeq) | strong | 44 | 99 |
| | Escherichia fergusonii Becca | EFB2_04469 | | Transcriptional regulatory protein BasR | insig. | 43 | 100 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23805 | | two-component system response regulator BasR | sig. | 43 | 100 |
| | Dickeya dianthicola ME23 | DZA65_RS20570 | | two-component system response regulator PmrA | insig. | 42 | 99 |
| | Pseudomonas putida KT2440 | PP_4225 | | two component system DNA-binding transcriptional activator QseB | sig. | 48 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02475 | | response regulator | cofit | 47 | 99 |
| | Dechlorosoma suillum PS | Dsui_3523 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | strong | 45 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS12680 | | response regulator | insig. | 44 | 100 |
| | Rhizobium sp. OAE497 | ABIE40_RS17030 | | response regulator | cofit | 43 | 99 |
| | Escherichia coli ECRC100 | OKFHMN_12570 | basR | two-component system response regulator BasR | cofit | 43 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02602 | | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 45 | 100 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01270 | | response regulator | insig. | 44 | 99 |
| | Escherichia coli BW25113 | b4113 | basR | DNA-binding response regulator in two-component regulatory system with BasS (NCBI) | sig. | 43 | 100 |
| | Pectobacterium carotovorum WPP14 | HER17_RS02000 | | two-component system response regulator PmrA | insig. | 43 | 99 |
| | Dickeya dianthicola 67-19 | HGI48_RS19450 | | two-component system response regulator PmrA | insig. | 41 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS19350 | | two-component system response regulator PmrA | insig. | 41 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04594 | | Transcriptional regulatory protein QseB | insig. | 45 | 100 |
| | Escherichia coli ECOR38 | HEPCGN_11205 | basR | two-component system response regulator BasR | strong | 43 | 100 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18790 | | transcriptional regulator | insig. | 46 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_005556 | | two-component system response regulator TctD | insig. | 43 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS18885 | | response regulator transcription factor | insig. | 48 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20630 | | transcriptional regulator | sig. | 45 | 100 |
| | Dickeya dianthicola 67-19 | HGI48_RS21345 | | response regulator | insig. | 45 | 100 |
| | Escherichia coli BL21 | ECD_03984 | | response regulator in two-component regulatory system with BasS | strong | 43 | 100 |
| | Escherichia coli ECOR27 | NOLOHH_04835 | basR | two-component system response regulator BasR | insig. | 43 | 100 |