Homologs of PGA1_262p00510 from Phaeobacter inhibens DSM 17395

Predicted exonuclease of the beta-lactamase fold involved in RNA processing
SEED: mRNA 3-end processing factor
KEGG: putative mRNA 3-end processing factor

59 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_262p00510 Predicted exonuclease of the beta-lactamase fold involved in RNA processing sig. 100 100
o Agrobacterium fabrum C58 Atu0839 hypothetical protein sig. 65 97
o Rhizobium sp. OAE497 ABIE40_RS04630 ligase-associated DNA damage response exonuclease insig. 62 98
o Caulobacter crescentus NA1000 CCNA_03759 mRNA 3'-end processing factor sig. 66 98
o Caulobacter crescentus NA1000 Δfur CCNA_03759 mRNA 3'-end processing factor cofit 66 98
o Sinorhizobium meliloti 1021 SMc03176 hypothetical protein insig. 63 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08710 ligase-associated DNA damage response exonuclease insig. 59 98
o Bosea sp. OAE506 ABIE41_RS24100 ligase-associated DNA damage response exonuclease insig. 57 98
o Rhodopseudomonas palustris CGA009 TX73_004140 ligase-associated DNA damage response exonuclease insig. 57 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3852 putative exonuclease, DNA ligase-associated insig. 55 97
o Alteromonas macleodii MIT1002 MIT1002_03767 Ribonuclease insig. 53 98
o Azospirillum brasilense Sp245 AZOBR_RS09955 beta-lactamase insig. 55 95
o Azospirillum sp. SherDot2 MPMX19_02216 hypothetical protein insig. 53 98
o Variovorax sp. OAS795 ABID97_RS00395 ligase-associated DNA damage response exonuclease insig. 39 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3654.1 hypothetical protein insig. 42 95
o Variovorax sp. SCN45 GFF3696 mRNA 3-end processing factor insig. 40 96
o Lysobacter sp. OAE881 ABIE51_RS03750 ligase-associated DNA damage response exonuclease insig. 42 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS21350 ligase-associated DNA damage response exonuclease insig. 40 98
o Pseudomonas stutzeri RCH2 Psest_1649 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 41 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1242 mRNA 3-end processing factor insig. 39 93
o Paraburkholderia graminis OAS925 ABIE53_005969 putative mRNA 3-end processing factor insig. 42 92
o Burkholderia phytofirmans PsJN BPHYT_RS26305 exonuclease insig. 41 91
o Pseudomonas syringae pv. syringae B728a Psyr_3872 conserved hypothetical protein insig. 38 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3872 conserved hypothetical protein insig. 38 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02820 putative mRNA 3-end processing factor insig. 41 91
o Herbaspirillum seropedicae SmR1 HSERO_RS11400 exonuclease sig. 38 93
o Pseudomonas sp. S08-1 OH686_06055 putative exonuclease, DNA ligase-associated insig. 38 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS20345 ligase-associated DNA damage response exonuclease insig. 41 91
o Pseudomonas putida KT2440 PP_1106 conserved protein of unknown function insig. 37 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3181 mRNA 3-end processing factor insig. 37 91
o Pseudomonas fluorescens SBW25 PFLU_RS06490 ligase-associated DNA damage response exonuclease insig. 38 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06490 ligase-associated DNA damage response exonuclease insig. 38 91
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09100 DNA ligase-associated DEXH box helicase insig. 35 97
o Pseudomonas simiae WCS417 PS417_06425 exonuclease insig. 38 91
o Pseudomonas sp. RS175 PFR28_00509 hypothetical protein insig. 37 91
o Dinoroseobacter shibae DFL-12 Dshi_2587 DNA damage response exonuclease, associated with a ligase (from data) strong 37 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14095 MBL fold metallo-hydrolase insig. 33 91
o Pseudomonas fluorescens FW300-N2C3 AO356_05485 DNA ligase-associated DEXH box helicase insig. 37 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20350 ligase-associated DNA damage response exonuclease insig. 34 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13225 exonuclease sig. 33 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2956 mRNA 3-end processing factor insig. 36 90
o Acidovorax sp. GW101-3H11 Ac3H11_4921 mRNA 3-end processing factor insig. 36 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01950 MBL fold metallo-hydrolase insig. 38 32
  Pseudomonas fluorescens FW300-N2C3 AO356_23925 mRNA 3'-end processing factor insig. 25 54
  Burkholderia phytofirmans PsJN BPHYT_RS27805 RNA-metabolising metallo-beta-lactamase insig. 28 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1519 Metallo-beta-lactamase family protein, RNA-specific insig. 25 54
  Methanococcus maripaludis JJ MMJJ_RS07240 MBL fold metallo-hydrolase strong 21 51
  Methanococcus maripaludis S2 MMP_RS07115 MBL fold metallo-hydrolase strong 21 51
  Marinobacter adhaerens HP15 HP15_2406 metallo-beta-lactamase family protein insig. 28 38
  Pseudomonas sp. RS175 PFR28_02316 Ribonuclease insig. 26 35
  Pseudomonas fluorescens FW300-N2E3 AO353_19925 mRNA 3'-end processing factor insig. 23 52
  Kangiella aquimarina DSM 16071 B158DRAFT_1678 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 31 32
  Ralstonia solanacearum GMI1000 RS_RS00995 MBL fold metallo-hydrolase insig. 26 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18635 MBL fold metallo-hydrolase insig. 24 50
  Pseudomonas putida KT2440 PP_3291 Metallo-beta-lactamase family protein insig. 26 36
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09240 MBL fold metallo-hydrolase insig. 29 31
  Dechlorosoma suillum PS Dsui_1635 putative exonuclease of the beta-lactamase fold involved in RNA processing cofit 28 31
  Ralstonia sp. UNC404CL21Col ABZR87_RS19990 MBL fold metallo-hydrolase insig. 24 45
  Variovorax sp. SCN45 GFF6952 Metallo-beta-lactamase family protein, RNA-specific insig. 31 33