| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF3503 | | two-component response regulator | cofit | 100 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 41 | 98 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 40 | 97 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 43 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 42 | 94 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 41 | 97 |
| o | Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 41 | 97 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 38 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 41 | 97 |
| o | Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 40 | 100 |
| o | Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 40 | 97 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 38 | 98 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 35 | 93 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 37 | 96 |
| o | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 37 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 39 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 37 | 97 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 37 | 96 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 38 | 99 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 38 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 38 | 98 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 37 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 35 | 97 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 38 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 38 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_01618 | | Oxygen regulatory protein NreC | strong | 37 | 98 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04126 | | Transcriptional regulatory protein DegU | cofit | 37 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 35 | 97 |
| o | Pseudomonas sp. BP01 | JOY50_RS24990 | | response regulator transcription factor | insig. | 37 | 97 |
| o | Shewanella amazonensis SB2B | Sama_1873 | | response regulator receiver protein (RefSeq) | insig. | 35 | 96 |
| o | Pseudomonas sp. DMC3 | GFF4570 | | Transcriptional regulatory protein DegU | insig. | 38 | 97 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 38 | 95 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_25670 | | regulator | sig. | 37 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 36 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS22230 | | LuxR family transcriptional regulator | sig. | 38 | 97 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3581 | | Secretion system regulator of DegU/UvrY/BvgA type | insig. | 38 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32890 | | response regulator transcription factor | insig. | 38 | 94 |
| o | Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 37 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 35 | 97 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 35 | 97 |
| o | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 37 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 37 | 97 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 36 | 99 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 34 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 36 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 36 | 97 |
| | Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 36 | 97 |
| o | Cellulophaga baltica 18 | M666_RS04555 | | response regulator transcription factor | insig. | 33 | 96 |
| o | Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 34 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09600 | | LuxR family transcriptional regulator | insig. | 37 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 36 | 97 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 38 | 94 |
| o | Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 34 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09785 | | LuxR family transcriptional regulator | sig. | 39 | 94 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 36 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS00650 | | response regulator transcription factor | insig. | 35 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS06675 | | DNA-binding response regulator | insig. | 35 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS05130 | | response regulator transcription factor | insig. | 35 | 96 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 34 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02005 | | DNA-binding response regulator | insig. | 38 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS15330 | | DNA-binding response regulator | insig. | 38 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 36 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS21845 | | DNA-binding response regulator | insig. | 34 | 96 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 35 | 88 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 35 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 34 | 98 |
| o | Lysobacter sp. OAE881 | ABIE51_RS16750 | | response regulator transcription factor | cofit | 38 | 94 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS10030 | | response regulator transcription factor | cofit | 34 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 36 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14300 | | response regulator transcription factor | no data | 35 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14300 | | response regulator transcription factor | sig. | 35 | 98 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 34 | 98 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 34 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27730 | | LuxR family transcriptional regulator | no data | 34 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16770 | | DNA-binding response regulator | insig. | 34 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS18125 | | DNA-binding response regulator | insig. | 34 | 96 |
| | Methylophilus sp. DMC18 | GFF57 | | Response regulator UvrY | insig. | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26265 | | LuxR family transcriptional regulator | no data | 35 | 98 |
| o | Dickeya dadantii 3937 | DDA3937_RS11645 | | response regulator transcription factor | insig. | 33 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19985 | | two-component system response regulator NarL | insig. | 35 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 35 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10275 | | LuxR family transcriptional regulator | sig. | 33 | 98 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12275 | | hypothetical protein | insig. | 32 | 97 |
| o | Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 34 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20025 | | response regulator transcription factor | insig. | 35 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5052 | | Two-component response regulator | no data | 34 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36960 | | response regulator transcription factor | insig. | 32 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 32 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 36 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15210 | | DNA-binding response regulator | insig. | 36 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS00950 | | DNA-binding response regulator | strong | 35 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 32 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 32 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 31 | 97 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3272 | | DNA-binding response regulator, LuxR family | insig. | 35 | 95 |
| | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 33 | 98 |
| | Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 34 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03209 | | Transcriptional regulatory protein LnrK | cofit | 33 | 97 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 33 | 97 |