| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF2191 | | Pca operon transcriptional activator PcaQ | insig. | 100 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS24375 | | LysR substrate-binding domain-containing protein | strong | 86 | 99 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS12080 | | pca operon transcription factor PcaQ | strong | 53 | 92 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00565 | | pca operon transcription factor PcaQ | insig. | 51 | 94 |
| o | Ralstonia solanacearum UW163 | UW163_RS13895 | | pca operon transcription factor PcaQ | insig. | 51 | 94 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS16935 | | LysR family transcriptional regulator | insig. | 52 | 93 |
| o | Ralstonia solanacearum GMI1000 | RS_RS07250 | | pca operon transcription factor PcaQ | insig. | 51 | 93 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS32070 | | LysR family transcriptional regulator | cofit | 46 | 93 |
| o | Serratia liquefaciens MT49 | IAI46_12810 | | LysR family transcriptional regulator | insig. | 44 | 91 |
| o | Klebsiella michiganensis M5al | BWI76_RS13280 | | LysR family transcriptional regulator | strong | 44 | 87 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_23225 | | LysR family transcriptional regulator | insig. | 45 | 86 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2615 | | LysR family transcriptional regulator YdcI | insig. | 45 | 86 |
| o | Enterobacter sp. TBS_079 | MPMX20_02212 | | HTH-type transcriptional regulator GbpR | strong | 44 | 86 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1254 | | Transcriptional regulator | cofit | 43 | 89 |
| o | Escherichia fergusonii Becca | EFB2_02558 | | HTH-type transcriptional regulator CatM | insig. | 42 | 87 |
| o | Escherichia coli ECRC100 | OKFHMN_01655 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | cofit | 42 | 87 |
| o | Escherichia coli ECRC101 | MCAODC_16280 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 42 | 87 |
| o | Escherichia coli ECRC102 | NIAGMN_25790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 42 | 87 |
| o | Escherichia coli ECRC98 | JDDGAC_04145 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 42 | 87 |
| o | Escherichia coli ECRC99 | KEDOAH_26785 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | no data | 42 | 87 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS08220 | | LysR substrate-binding domain-containing protein | insig. | 42 | 87 |
| o | Escherichia coli ECRC62 | BNILDI_17790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | cofit | 42 | 87 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02293 | | HTH-type transcriptional regulator CatM | insig. | 42 | 87 |
| o | Escherichia coli BL21 | ECD_01379 | | putative DNA-binding transcriptional regulator | insig. | 41 | 87 |
| o | Escherichia coli BW25113 | b1422 | ydcI | putative transcriptional regulator LYSR-type (VIMSS) | strong | 41 | 87 |
| o | Escherichia coli ECOR27 | NOLOHH_19335 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | sig. | 41 | 87 |
| o | Escherichia coli ECOR38 | HEPCGN_26160 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | sig. | 41 | 87 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004922 | | LysR family pca operon transcriptional activator | insig. | 44 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS33450 | | LysR family transcriptional regulator | insig. | 44 | 91 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03866 | | transcriptional regulator, LysR family | cofit | 44 | 90 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS14825 | | pca operon transcription factor PcaQ | insig. | 43 | 91 |
| o | Pantoea sp. MT58 | IAI47_09590 | | LysR family transcriptional regulator | strong | 42 | 87 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06565 | | LysR family transcriptional regulator | cofit | 42 | 87 |
| | Variovorax sp. SCN45 | GFF4669 | | Pca operon transcriptional activator PcaQ | no data | 43 | 87 |
| | Rhizobium sp. OAE497 | ABIE40_RS19620 | | pca operon transcription factor PcaQ | strong | 40 | 91 |
| | Sinorhizobium meliloti 1021 | SM_b20580 | | LysR family transcriptional regulator | insig. | 40 | 90 |
| | Agrobacterium fabrum C58 | Atu4543 | | LysR family transcriptional regulator | strong | 40 | 91 |
| | Pseudomonas segetis P6 | ACVTMO_RS13585 | pcaQ | pca operon transcription factor PcaQ | insig. | 41 | 90 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27040 | pcaQ;go_function=DNA-binding | pca operon transcription factor PcaQ | strong | 38 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS31580 | pcaQ;go_function=DNA-binding | pca operon transcription factor PcaQ | strong | 38 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24780 | | pca operon transcription factor PcaQ | insig. | 38 | 90 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2121 | | regulatory protein, LysR:LysR, substrate-binding protein | insig. | 38 | 83 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2121 | | regulatory protein, LysR:LysR, substrate-binding protein | insig. | 38 | 83 |
| | Pseudomonas putida KT2440 | PP_1713 | | Transcriptional regulator PcaQ | sig. | 39 | 83 |
| | Pseudomonas sp. BP01 | JOY50_RS27845 | pcaQ | pca operon transcription factor PcaQ | insig. | 39 | 83 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5585 | | LysR family transcriptional regulator YdcI | insig. | 38 | 83 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c02580 | | putative HTH-type transcriptional regulator pcaQ | insig. | 36 | 88 |
| | Pseudomonas sp. SVBP6 | COO64_RS07065 | pcaQ | pca operon transcription factor PcaQ | insig. | 37 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_23585 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC101 | MCAODC_14635 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC102 | NIAGMN_21350 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC98 | JDDGAC_27540 | lysR | transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC99 | KEDOAH_04600 | lysR | transcriptional regulator | no data | 32 | 87 |
| | Escherichia coli ECRC62 | BNILDI_14075 | lysR | transcriptional regulator | cofit | 32 | 87 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26660 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Variovorax sp. OAS795 | ABID97_RS01380 | | LysR substrate-binding domain-containing protein | insig. | 32 | 92 |
| | Variovorax sp. SCN45 | GFF4149 | | hypothetical protein | insig. | 34 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31320 | | LysR substrate-binding domain-containing protein | insig. | 35 | 73 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 30 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 31 | 86 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3798 | | Putative transcriptional regulator | insig. | 32 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31295 | | LysR substrate-binding domain-containing protein | insig. | 36 | 73 |
| | Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 29 | 94 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06410 | | LysR family transcriptional regulator | insig. | 37 | 89 |
| | Klebsiella michiganensis M5al | BWI76_RS19595 | | hypothetical protein | insig. | 34 | 87 |
| | Pantoea sp. MT58 | IAI47_09745 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF270 | | Transcriptional regulator, LysR family | insig. | 34 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_005759 | | LysR family transcriptional regulator of gallate degradation | insig. | 31 | 90 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28155 | | transcriptional regulator LysR family protein | no data | 32 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS18780 | | LysR family transcriptional regulator | insig. | 30 | 91 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 35 | 74 |
| | Dickeya dianthicola ME23 | DZA65_RS19900 | | LysR family transcriptional regulator | insig. | 30 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19705 | | LysR family transcriptional regulator | strong | 28 | 92 |
| | Dickeya dianthicola 67-19 | HGI48_RS18765 | | LysR family transcriptional regulator | insig. | 30 | 91 |
| | Erwinia amylovora T8 | OLJFJH_13360 | | LysR family transcriptional regulator | insig. | 32 | 90 |
| | Klebsiella michiganensis M5al | BWI76_RS16160 | | LysR family transcriptional regulator | strong | 30 | 91 |
| | Variovorax sp. SCN45 | GFF2367 | | Transcriptional regulator, LysR family | cofit | 40 | 56 |
| | Bosea sp. OAE506 | ABIE41_RS22670 | | LysR substrate-binding domain-containing protein | insig. | 38 | 59 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10740 | | LysR family transcriptional regulator | insig. | 32 | 89 |
| | Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 35 | 78 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS03730 | | LysR substrate-binding domain-containing protein | insig. | 31 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3928 | | Chromosome initiation inhibitor | sig. | 29 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31025 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| | Rhizobium sp. OAE497 | ABIE40_RS13945 | | LysR family transcriptional regulator | sig. | 31 | 91 |
| | Pseudomonas putida KT2440 | PP_2516 | | HTH-type transcriptional regulator GalR | insig. | 31 | 91 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 30 | 80 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1106 | | Chromosome initiation inhibitor | insig. | 29 | 88 |
| | Azospirillum sp. SherDot2 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | insig. | 35 | 89 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | cofit | 41 | 55 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04085 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4201 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS13535 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26165 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| | Variovorax sp. OAS795 | ABID97_RS06825 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_861 | | Transcriptional regulator, LysR family | insig. | 27 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5691 | | Chromosome initiation inhibitor | no data | 28 | 94 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21040 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 27 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01375 | | LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway | sig. | 32 | 86 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12630 | | LysR family transcriptional regulator | strong | 31 | 87 |