Homologs of GFF2124 from Sphingobium sp. HT1-2

L,D-transpeptidase
SEED: FIG00637194: hypothetical protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2124 L,D-transpeptidase cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0719 Uncharacterized protein conserved in bacteria strong 54 80
  Sphingobium sp. HT1-2 GFF5154 L,D-transpeptidase cofit 51 80
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1169.1 ErfK/YbiS/YcfS/YnhG family protein insig. 46 81
  Lysobacter sp. OAE881 ABIE51_RS10880 L,D-transpeptidase insig. 44 80
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03880 L,D-transpeptidase family protein insig. 40 90
o Bosea sp. OAE506 ABIE41_RS06555 L,D-transpeptidase insig. 38 83
o Rhizobium sp. OAE497 ABIE40_RS27810 L,D-transpeptidase insig. 38 84
o Sinorhizobium meliloti 1021 SM_b21573 hypothetical protein insig. 37 80
  Acinetobacter baumannii LAC-4 RR41_RS05540 L,D-transpeptidase insig. 38 79
  Rhizobium sp. OAE497 ABIE40_RS12005 L,D-transpeptidase cofit 39 80
  Variovorax sp. OAS795 ABID97_RS27685 L,D-transpeptidase family protein insig. 35 80
  Acinetobacter radioresistens SK82 MPMX26_00975 hypothetical protein strong 37 90
  Sinorhizobium meliloti 1021 SMc01575 hypothetical protein strong 37 80
  Agrobacterium fabrum C58 Atu2133 hypothetical protein strong 39 80
  Pseudomonas stutzeri RCH2 Psest_2334 Uncharacterized protein conserved in bacteria strong 31 35
  Synechocystis sp000284455 PCC 6803 SGL_RS13015 L,D-transpeptidase sig. 32 37
  Synechococcus elongatus PCC 7942 Synpcc7942_0647 hypothetical protein sig. 31 35
  Marinobacter adhaerens HP15 HP15_3824 ErfK/YbiS/YcfS/YnhG family protein strong 28 34
  Dinoroseobacter shibae DFL-12 Dshi_3496 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 28 35
  Azospirillum sp. SherDot2 MPMX19_04296 hypothetical protein insig. 33 25
  Bosea sp. OAE506 ABIE41_RS22060 L,D-transpeptidase insig. 46 15
  Pseudomonas aeruginosa PA14 IKLFDK_14500 YkuD domain-containing protein cofit 25 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03895 transpeptidase cofit 29 35
  Rhizobium sp. OAE497 ABIE40_RS26600 L,D-transpeptidase insig. 40 17
  Escherichia coli BL21 ECD_00786 L,D-transpeptidase linking Lpp to murein strong 28 35
  Escherichia fergusonii Becca EFB2_03286 putative L,D-transpeptidase YbiS cofit 28 35
  Escherichia coli ECOR27 NOLOHH_22515 ldtB L,D-transpeptidase strong 28 35
  Escherichia coli ECOR38 HEPCGN_01875 ldtB L,D-transpeptidase strong 28 35
  Escherichia coli ECRC100 OKFHMN_06165 ldtB L,D-transpeptidase cofit 28 35
  Escherichia coli ECRC101 MCAODC_25380 ldtB L,D-transpeptidase strong 28 35
  Escherichia coli ECRC102 NIAGMN_04210 ldtB L,D-transpeptidase cofit 28 35
  Escherichia coli ECRC62 BNILDI_20795 ldtB L,D-transpeptidase strong 28 35
  Escherichia coli ECRC98 JDDGAC_09800 ldtB L,D-transpeptidase strong 28 35
  Escherichia coli ECRC99 KEDOAH_21745 ldtB L,D-transpeptidase no data 28 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02894 putative L,D-transpeptidase YbiS cofit 28 35
  Escherichia coli Nissle 1917 ECOLIN_RS04365 L,D-transpeptidase no data 28 35
  Escherichia coli BW25113 b0819 ybiS hypothetical protein (NCBI) strong 28 35
  Pseudomonas sp. S08-1 OH686_01780 L,D-transpeptidase strong 26 35
  Bosea sp. OAE506 ABIE41_RS21100 L,D-transpeptidase insig. 41 16
  Enterobacter asburiae PDN3 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria strong 28 35
  Enterobacter sp. TBS_079 MPMX20_01456 putative L,D-transpeptidase YbiS sig. 28 35
  Phaeobacter inhibens DSM 17395 PGA1_c34770 Uncharacterized protein conserved in bacteria sig. 28 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF716 L,D-transpeptidase YbiS cofit 27 35
  Erwinia tracheiphila SCR3 LU632_RS09245 L,D-transpeptidase family protein strong 30 35
  Pseudomonas sp. RS175 PFR28_00960 hypothetical protein strong 26 35
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19675 L D-transpeptidase cofit 30 35
  Enterobacter asburiae PDN3 EX28DRAFT_1681 Uncharacterized protein conserved in bacteria insig. 25 54
  Xanthobacter sp. DMC5 GFF4149 hypothetical protein no data 44 15
  Klebsiella pneumoniae MKP103 KDGMDA_17285 L D-transpeptidase strong 27 35
  Pseudomonas fluorescens FW300-N2E3 AO353_19015 hypothetical protein strong 26 35
  Bosea sp. OAE506 ABIE41_RS10175 L,D-transpeptidase insig. 41 16
  Pantoea sp. MT58 IAI47_13415 L,D-transpeptidase family protein strong 29 37
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2221 ErfK/YbiS/YcfS/YnhG family protein strong 26 35
  Pseudomonas sp. BP01 JOY50_RS25815 L,D-transpeptidase family protein insig. 26 35
  Klebsiella michiganensis M5al BWI76_RS09030 transpeptidase strong 27 35
  Escherichia fergusonii Becca EFB2_02314 putative L,D-transpeptidase YnhG insig. 27 35
  Escherichia coli ECOR27 NOLOHH_17800 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECOR38 HEPCGN_05665 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC100 OKFHMN_27280 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC101 MCAODC_18130 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC102 NIAGMN_00785 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC62 BNILDI_16590 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC98 JDDGAC_01855 ldtE L,D-transpeptidase LdtE insig. 27 35
  Escherichia coli ECRC99 KEDOAH_00830 ldtE L,D-transpeptidase LdtE no data 27 35
  Escherichia coli Nissle 1917 ECOLIN_RS09385 L,D-transpeptidase LdtE insig. 27 35
  Escherichia fergusonii Becca EFB2_01899 putative L,D-transpeptidase ErfK/SrfK insig. 30 35
  Escherichia coli ECOR38 HEPCGN_03475 ldtA L,D-transpeptidase insig. 30 35
  Escherichia coli Nissle 1917 ECOLIN_RS11615 L,D-transpeptidase insig. 30 35
  Escherichia coli BL21 ECD_01647 murein L,D-transpeptidase no data 27 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02046 putative L,D-transpeptidase YnhG insig. 27 35
  Escherichia coli BW25113 b1678 ynhG hypothetical protein (NCBI) insig. 27 35
  Enterobacter sp. TBS_079 MPMX20_01949 putative L,D-transpeptidase YnhG insig. 24 54
  Rhodopseudomonas palustris CGA009 TX73_001100 L,D-transpeptidase cofit 43 15
  Agrobacterium fabrum C58 Atu0669 hypothetical protein insig. 39 17
  Escherichia coli BL21 ECD_01899 L,D-transpeptidase linking Lpp to murein sig. 29 35
  Escherichia coli ECOR27 NOLOHH_16050 ldtA L,D-transpeptidase insig. 29 35
  Escherichia coli ECRC100 OKFHMN_25140 ldtA L,D-transpeptidase insig. 29 35
  Escherichia coli ECRC101 MCAODC_20250 ldtA L,D-transpeptidase insig. 29 35
  Escherichia coli ECRC102 NIAGMN_22645 ldtA L,D-transpeptidase insig. 29 35
  Escherichia coli ECRC62 BNILDI_14880 ldtA L,D-transpeptidase cofit 29 35
  Escherichia coli ECRC98 JDDGAC_29270 ldtA L,D-transpeptidase insig. 29 35
  Escherichia coli ECRC99 KEDOAH_02970 ldtA L,D-transpeptidase no data 29 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01718 putative L,D-transpeptidase ErfK/SrfK insig. 29 35
  Escherichia coli BW25113 b1990 erfK conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) insig. 29 35
  Pseudomonas sp. DMC3 GFF4626 putative L,D-transpeptidase YbiS cofit 26 35
  Phaeobacter inhibens DSM 17395 PGA1_c17320 Uncharacterized protein conserved in bacteria strong 25 41
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_292 ErfK/YbiS/YcfS/YnhG family protein strong 25 35
  Rhizobium sp. OAE497 ABIE40_RS05790 L,D-transpeptidase insig. 43 15
  Klebsiella michiganensis M5al BWI76_RS16970 murein L,D-transpeptidase sig. 28 36
  Pseudomonas sp. SVBP6 COO64_RS09790 L,D-transpeptidase family protein insig. 25 35
  Rhodopseudomonas palustris CGA009 TX73_021875 L,D-transpeptidase insig. 48 13
  Rhodopseudomonas palustris CGA009 TX73_018480 L,D-transpeptidase insig. 46 15
  Sinorhizobium meliloti 1021 SMc00924 hypothetical protein insig. 43 16
  Bosea sp. OAE506 ABIE41_RS14200 L,D-transpeptidase insig. 41 16
  Pseudomonas fluorescens FW300-N2C3 AO356_03215 hypothetical protein strong 25 35
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein strong 25 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3564 L,D-transpeptidase YnhG insig. 27 40
  Rahnella sp. WP5 EX31_RS10780 L,D-transpeptidase family protein sig. 26 37
  Pseudomonas fluorescens SBW25 PFLU_RS08365 L,D-transpeptidase family protein cofit 25 35