Homologs of PGA1_c20680 from Phaeobacter inhibens DSM 17395

TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data)
Original annotation: C4-dicarboxylate-binding periplasmic protein DctP
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component
KEGG: C4-dicarboxylate-binding protein DctP

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c20680 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) strong 100 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_09650 C4-dicarboxylate ABC transporter insig. 68 96
o Pseudomonas segetis P6 ACVTMO_RS21730 dctP C4-dicarboxylate TRAP substrate-binding protein DctP insig. 54 98
  Pseudomonas segetis P6 ACVTMO_RS12000 TRAP transporter substrate-binding protein insig. 52 96
o Pseudomonas aeruginosa MRSN321 DY961_RS11685 dctP;inference=COORDINATES C4-dicarboxylate TRAP substrate-binding protein DctP insig. 50 98
o Pseudomonas aeruginosa PA14 IKLFDK_27650 C4-dicarboxylate TRAP substrate-binding protein DctP insig. 50 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS50415 dctP;inference=COORDINATES C4-dicarboxylate TRAP substrate-binding protein DctP insig. 50 98
o Pseudomonas stutzeri RCH2 Psest_4268 tripartite ATP-independent periplasmic transporter solute receptor, DctP family strong 51 98
o Pseudomonas sp. DMC3 GFF1146 C4-dicarboxylate-binding periplasmic protein DctP cofit 50 97
o Pseudomonas sp. RS175 PFR28_00119 C4-dicarboxylate-binding periplasmic protein DctP insig. 50 97
  Pseudomonas aeruginosa MRSN321 DY961_RS08050 TRAP transporter substrate-binding protein sig. 48 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS44750 TRAP transporter substrate-binding protein strong 48 96
  Pseudomonas aeruginosa PA14 IKLFDK_03925 C4-dicarboxylate ABC transporter strong 48 96
o Castellaniella sp019104865 MT123 ABCV34_RS05050 TRAP transporter substrate-binding protein insig. 49 99
  Pseudomonas sp. RS175 PFR28_00257 C4-dicarboxylate-binding periplasmic protein DctP insig. 50 94
o Pseudomonas fluorescens SBW25 PFLU_RS16930 TRAP transporter substrate-binding protein insig. 49 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16930 TRAP transporter substrate-binding protein strong 49 98
o Pseudomonas simiae WCS417 PS417_14910 C4-dicarboxylate ABC transporter insig. 48 98
  Pseudomonas stutzeri RCH2 Psest_2664 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 48 97
o Shewanella loihica PV-4 Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) strong 53 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3238 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 49 95
o Pseudomonas fluorescens FW300-N2C3 AO356_06880 C4-dicarboxylate ABC transporter insig. 49 98
  Pseudomonas segetis P6 ACVTMO_RS11930 TRAP transporter substrate-binding protein insig. 47 97
  Pseudomonas segetis P6 ACVTMO_RS12020 TRAP transporter substrate-binding protein insig. 46 98
o Shewanella amazonensis SB2B Sama_2209 alpha-ketoglutarate TRAP transporter, solute receptor component (from data) strong 51 91
o Shewanella sp. ANA-3 Shewana3_1416 TRAP dicarboxylate transporter, DctP subunit (RefSeq) strong 50 91
o Shewanella oneidensis MR-1 SO3134 dctP C4-dicarboxylate-binding periplasmic protein (NCBI ptt file) insig. 49 91
  Pseudomonas stutzeri RCH2 Psest_2142 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 47 93
  Pseudomonas stutzeri RCH2 Psest_0787 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 46 91
o Pseudomonas sp. S08-1 OH686_16140 TRAP-type transporter, substrate-binding protein cofit 41 99
  Pseudomonas aeruginosa PA14 IKLFDK_00430 C4-dicarboxylate ABC transporter insig. 42 98
  Pseudomonas aeruginosa MRSN321 DY961_RS23345 DctP family TRAP transporter solute-binding subunit cofit 42 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS55810 DctP family TRAP transporter solute-binding subunit cofit 42 98
  Pseudomonas stutzeri RCH2 Psest_0786 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 44 98
o Herbaspirillum seropedicae SmR1 HSERO_RS04240 C4-dicarboxylate ABC transporter sig. 42 97
o Rhodopseudomonas palustris CGA009 TX73_010550 TRAP transporter substrate-binding protein strong 44 92
o Rhodospirillum rubrum S1H Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) strong 43 95
o Magnetospirillum magneticum AMB-1 AMB_RS04560 C4-dicarboxylate ABC transporter cofit 42 98
o Azospirillum sp. SherDot2 MPMX19_00659 C4-dicarboxylate-binding periplasmic protein DctP insig. 43 98
o Azospirillum brasilense Sp245 AZOBR_RS09605 C4-dicarboxylate ABC transporter sig. 43 97
  Castellaniella sp019104865 MT123 ABCV34_RS13980 TRAP transporter substrate-binding protein insig. 41 97
  Herbaspirillum seropedicae SmR1 HSERO_RS14035 C4-dicarboxylate ABC transporter insig. 39 98
o Dechlorosoma suillum PS Dsui_3155 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 42 89
o Burkholderia phytofirmans PsJN BPHYT_RS24175 C4-dicarboxylate ABC transporter insig. 29 97
  Castellaniella sp019104865 MT123 ABCV34_RS07845 TRAP transporter substrate-binding protein insig. 29 98
o Paraburkholderia graminis OAS925 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor sig. 28 97
o Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 31 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 98
o Klebsiella michiganensis M5al BWI76_RS24125 hypothetical protein insig. 29 96
  Pseudomonas stutzeri RCH2 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) strong 28 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family insig. 28 97
o Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 92
  Pseudomonas segetis P6 ACVTMO_RS11805 TRAP transporter substrate-binding protein cofit 29 98
o Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 29 97
o Escherichia coli Nissle 1917 ECOLIN_RS17380 TRAP transporter substrate-binding protein insig. 29 94
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 29 98
o Escherichia coli ECOR38 HEPCGN_18535 Bacterial extracellular solute-binding protein, family 7 insig. 30 81
o Escherichia coli ECOR27 NOLOHH_11100 Bacterial extracellular solute-binding protein, family 7 insig. 30 81
o Agrobacterium fabrum C58 Atu2744 C4-dicarboxylate binding protein insig. 31 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03838 Solute-binding protein insig. 29 94
o Escherichia coli ECRC62 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 insig. 29 94
  Azospirillum sp. SherDot2 MPMX19_03529 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 29 89
o Pseudomonas sp. BP01 JOY50_RS04225 TRAP transporter substrate-binding protein no data 28 90
  Pseudomonas fluorescens FW300-N2C3 AO356_25645 ABC transporter substrate-binding protein insig. 28 97
  Sinorhizobium meliloti 1021 SM_b21438 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide insig. 29 95
  Azospirillum brasilense Sp245 AZOBR_RS26640 ABC transporter substrate-binding protein insig. 29 86
  Sinorhizobium meliloti 1021 SMa0252 TRAP-type periplasmic solute-binding protein insig. 30 98
o Alteromonas macleodii MIT1002 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO insig. 30 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5505 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 27 89
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 28 90
o Bosea sp. OAE506 ABIE41_RS07830 TRAP transporter substrate-binding protein insig. 28 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS21090 TRAP transporter substrate-binding protein insig. 28 88
  Acidovorax sp. GW101-3H11 Ac3H11_3226 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 28 96
  Azospirillum brasilense Sp245 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 28 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3130 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 97
  Castellaniella sp019104865 MT123 ABCV34_RS13675 TRAP transporter substrate-binding protein insig. 29 90
  Variovorax sp. SCN45 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 27 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1301 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 27 97
  Pseudomonas sp. RS175 PFR28_01614 hypothetical protein insig. 28 97
o Caulobacter crescentus NA1000 CCNA_01513 C4-dicarboxylate-binding protein strong 31 83
o Caulobacter crescentus NA1000 Δfur CCNA_01513 C4-dicarboxylate-binding protein insig. 31 83
  Castellaniella sp019104865 MT123 ABCV34_RS12265 TRAP transporter substrate-binding protein insig. 28 89
  Azospirillum brasilense Sp245 AZOBR_RS30130 C4-dicarboxylate ABC transporter insig. 28 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 29 85
  Acidovorax sp. GW101-3H11 Ac3H11_1949 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 28 86
o Dinoroseobacter shibae DFL-12 Dshi_0958 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 29 83
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 29 97
o Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 28 95
  Castellaniella sp019104865 MT123 ABCV34_RS12220 DctP family TRAP transporter solute-binding subunit insig. 29 89
o Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 28 85
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO insig. 28 85
  Azospirillum brasilense Sp245 AZOBR_RS31400 C4-dicarboxylate ABC transporter insig. 29 82
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 85
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 28 95
o Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 28 85
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 85
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 28 85
o Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 28 85
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU2822 TRAP dicarboxylate family transporter (TIGR) insig. 29 80