| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Xanthobacter sp. DMC5 | GFF1448 | | HTH-type transcriptional regulator DmlR | insig. | 100 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_006359 | | DNA-binding transcriptional LysR family regulator | sig. | 60 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS32910 | | LysR family transcriptional regulator | insig. | 56 | 100 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5001 | | Chromosome initiation inhibitor | insig. | 55 | 100 |
| o | Variovorax sp. SCN45 | GFF2264 | | Transcriptional regulator, LysR family | insig. | 53 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS18580 | | LysR family transcriptional regulator | insig. | 55 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS07860 | | LysR family transcriptional regulator | insig. | 53 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS07845 | | LysR family transcriptional regulator | no data | 51 | 100 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 39 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 40 | 96 |
| o | Pseudomonas segetis P6 | MPMX49_04464 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 97 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4646.1 | | Transcriptional regulator, LysR family | insig. | 40 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 38 | 95 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 40 | 96 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 40 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 95 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS00135 | | LysR family transcriptional regulator | cofit | 39 | 99 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4454 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 38 | 97 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01740 | | HTH-type transcriptional regulator DmlR | cofit | 39 | 96 |
| o | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 95 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02245 | | transcriptional regulator, LysR family | strong | 38 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000382 | | DNA-binding transcriptional LysR family regulator | strong | 38 | 98 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS01435 | | LysR family transcriptional regulator | strong | 38 | 98 |
| | Dechlorosoma suillum PS | Dsui_2353 | | transcriptional regulator | insig. | 39 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11355 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_23090 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| o | Variovorax sp. OAS795 | ABID97_RS27305 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_998 | | Chromosome initiation inhibitor | insig. | 49 | 65 |
| | Pseudomonas sp. RS175 | PFR28_00251 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 95 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10705 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 37 | 96 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS02875 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5325 | | Transcriptional regulator, LysR family | insig. | 39 | 93 |
| o | Pseudomonas simiae WCS417 | PS417_08020 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_17005 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 38 | 97 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 38 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02080 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 35 | 97 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13530 | | LysR family transcriptional regulator | no data | 36 | 97 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 35 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_004366 | | DNA-binding transcriptional LysR family regulator | sig. | 38 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 95 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 37 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05200 | | transcriptional regulator, LysR family | insig. | 37 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 36 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Ralstonia solanacearum GMI1000 | RS_RS11675 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10570 | | LysR family transcriptional regulator | strong | 38 | 95 |
| | Variovorax sp. SCN45 | GFF7142 | | Transcriptional regulator, LysR family | insig. | 37 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 99 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3607 | | transcriptional regulator, LysR family | insig. | 37 | 99 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 36 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15635 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 34 | 95 |
| | Pseudomonas simiae WCS417 | PS417_06325 | | LysR family transcriptional regulator | strong | 38 | 95 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 37 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06390 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06390 | | LysR family transcriptional regulator | cofit | 38 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19275 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2979 | | Transcriptional regulator, LysR family | insig. | 40 | 95 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 37 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 36 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 36 | 100 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 35 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 34 | 95 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 95 |
| | Rhizobium sp. OAE497 | ABIE40_RS03475 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Pseudomonas stutzeri RCH2 | Psest_2163 | | Transcriptional regulator | insig. | 38 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 37 | 95 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 37 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 36 | 95 |
| | Agrobacterium fabrum C58 | Atu5187 | | LysR family transcriptional regulator | insig. | 40 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18640 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Shewanella loihica PV-4 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 34 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 37 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_005448 | | LysR family transcriptional activator of dmlA | sig. | 36 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 37 | 95 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 37 | 95 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS06710 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 34 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3045 | | Transcriptional regulator, LysR family | insig. | 36 | 95 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS06865 | | LysR family transcriptional regulator | insig. | 35 | 95 |