Homologs of EX28DRAFT_1001 from Enterobacter asburiae PDN3

PAS domain S-box/diguanylate cyclase (GGDEF) domain
SEED: Serine phosphatase RsbU, regulator of sigma subunit

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_1001 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_02446 Diguanylate cyclase DgcM insig. 87 100
o Escherichia coli ECOR27 NOLOHH_19900 dgcM diguanylate cyclase DgcM insig. 69 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02341 Diguanylate cyclase DgcM insig. 69 99
o Escherichia coli BW25113 b1341 b1341 orf, hypothetical protein (VIMSS) strong 69 99
o Escherichia coli ECRC100 OKFHMN_02185 dgcM diguanylate cyclase DgcM insig. 69 99
o Escherichia coli ECRC101 MCAODC_16070 dgcM diguanylate cyclase DgcM sig. 69 99
o Escherichia coli ECRC102 NIAGMN_26355 dgcM diguanylate cyclase DgcM cofit 69 99
o Escherichia coli ECRC98 JDDGAC_04745 dgcM diguanylate cyclase DgcM insig. 69 99
o Escherichia coli ECRC99 KEDOAH_26570 dgcM diguanylate cyclase DgcM no data 69 99
o Escherichia coli ECOR38 HEPCGN_25975 dgcM diguanylate cyclase DgcM insig. 69 99
o Escherichia coli BL21 ECD_01318 diguanylate cyclase, csgD regulator insig. 69 99
o Escherichia fergusonii Becca EFB2_02587 Diguanylate cyclase DgcM insig. 69 99
o Escherichia coli Nissle 1917 ECOLIN_RS08045 diguanylate cyclase DgcM insig. 69 99
o Escherichia coli ECRC62 BNILDI_18050 dgcM diguanylate cyclase DgcM insig. 69 99
o Klebsiella pneumoniae MKP103 KDGMDA_22435 sensor domain-containing diguanylate cyclase insig. 52 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 36 75
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 32 69
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 46 39
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 37 66
  Azospirillum sp. SherDot2 MPMX19_06692 hypothetical protein insig. 60 28
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 44 43
  Rhodospirillum rubrum S1H Rru_A3374 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 42 44
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 32 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 32 76
  Pseudomonas aeruginosa PA14 IKLFDK_14585 GGDEF domain-containing protein insig. 46 45
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 45 39
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 40 45
  Lysobacter sp. OAE881 ABIE51_RS04020 sensor domain-containing diguanylate cyclase insig. 46 39
  Pseudomonas aeruginosa MRSN321 DY961_RS02640 GGDEF domain-containing protein insig. 46 45
  Pseudomonas aeruginosa PUPa3 DQ20_RS32955 GGDEF domain-containing protein insig. 46 45
  Azospirillum sp. SherDot2 MPMX19_06692 hypothetical protein insig. 36 55
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 42 48
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 43 45
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 34 62
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 43 40
  Rhodospirillum rubrum S1H Rru_A1272 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 32 67
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12745 GGDEF domain-containing protein cofit 44 40
  Vibrio cholerae E7946 ATCC 55056 CSW01_18905 GGDEF domain-containing protein cofit 40 41
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 43 43
  Magnetospirillum magneticum AMB-1 AMB_RS04735 diguanylate cyclase cofit 43 40
  Cupriavidus basilensis FW507-4G11 RR42_RS31060 diguanylate cyclase insig. 41 48
  Ralstonia solanacearum PSI07 RPSI07_RS09290 GGDEF domain-containing protein insig. 43 42
  Pseudomonas sp. DMC3 GFF5034 hypothetical protein cofit 41 41
  Xanthobacter sp. DMC5 GFF1835 hypothetical protein insig. 40 47
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 39 51
  Rahnella sp. WP5 EX31_RS20690 diguanylate cyclase cofit 44 41
  Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 44 41
  Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 41 41
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 41 40
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 38 51
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02645 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 34 61
  Pectobacterium carotovorum WPP14 HER17_RS03000 sensor domain-containing diguanylate cyclase cofit 45 40
  Acidovorax sp. GW101-3H11 Ac3H11_1766 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 43
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 40 44
  Pectobacterium carotovorum WPP14 HER17_RS13535 sensor domain-containing diguanylate cyclase insig. 43 41
  Shewanella sp. ANA-3 Shewana3_0308 diguanylate cyclase (RefSeq) insig. 41 41
  Shewanella oneidensis MR-1 SO2049 GGDEF family protein (NCBI ptt file) insig. 43 41
  Shewanella amazonensis SB2B Sama_1759 GGDEF domain-containing protein (RefSeq) insig. 41 41
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 41 45
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04378 hypothetical protein cofit 43 39
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 43 43
  Pseudomonas segetis P6 ACVTMO_RS13215 GGDEF domain-containing protein insig. 42 42
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 37 54
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 34 48
  Lysobacter sp. OAE881 ABIE51_RS16150 EAL domain-containing protein insig. 32 74
  Azospirillum sp. SherDot2 MPMX19_00642 Diguanylate cyclase VdcA insig. 44 38
  Dechlorosoma suillum PS Dsui_2893 diguanylate cyclase (GGDEF) domain-containing protein cofit 42 43
  Variovorax sp. SCN45 GFF2106 hypothetical protein insig. 41 44
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 40 40
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 37 49
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15140 sensor domain-containing diguanylate cyclase cofit 45 40
  Pseudomonas sp. S08-1 OH686_18785 hypothetical protein insig. 41 41
  Rhodopseudomonas palustris CGA009 TX73_021305 diguanylate cyclase insig. 41 40
  Vibrio cholerae E7946 ATCC 55056 CSW01_11340 GGDEF domain-containing protein insig. 42 40
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 41 42
  Rhodopseudomonas palustris CGA009 TX73_019845 diguanylate cyclase insig. 32 63
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 44 40
  Methylophilus sp. DMC18 GFF267 Diguanylate cyclase VdcA insig. 42 38
  Pseudomonas sp. DMC3 GFF2253 hypothetical protein insig. 40 40
  Pseudomonas fluorescens FW300-N2C3 AO356_17815 hypothetical protein cofit 42 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5491 FOG: GGDEF domain strong 42 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16665 GGDEF domain-containing protein cofit 42 42
  Ralstonia solanacearum UW163 UW163_RS18020 GGDEF domain-containing protein insig. 42 42
  Magnetospirillum magneticum AMB-1 AMB_RS23415 PAS domain S-box protein cofit 35 44
  Magnetospirillum magneticum AMB-1 AMB_RS23425 PAS domain S-box protein insig. 34 43
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 38 44
  Pantoea sp. MT58 IAI47_05250 GGDEF domain-containing protein insig. 44 40
  Pseudomonas sp. BP01 JOY50_RS13775 sensor domain-containing diguanylate cyclase no data 44 39
  Bosea sp. OAE506 ABIE41_RS18170 PleD family two-component system response regulator insig. 42 42
  Pseudomonas segetis P6 ACVTMO_RS18465 GGDEF domain-containing protein insig. 42 39
  Pectobacterium carotovorum WPP14 HER17_RS05020 sensor domain-containing diguanylate cyclase cofit 41 39
  Magnetospirillum magneticum AMB-1 AMB_RS23435 GGDEF domain-containing protein insig. 38 42
  Acidovorax sp. GW101-3H11 Ac3H11_3698 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 43
  Acidovorax sp. GW101-3H11 Ac3H11_2965 Putative diguanylate cyclase (GGDEF domain) insig. 40 42
  Acidovorax sp. GW101-3H11 Ac3H11_1024 GGDEF/response regulator receiver domain protein insig. 37 47
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 42
  Pseudomonas sp. DMC3 GFF1559 hypothetical protein insig. 44 39
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 42 39
  Acinetobacter radioresistens SK82 MPMX26_01917 hypothetical protein no data 42 39