Homologs of CA265_RS01800 from Pedobacter sp. GW460-11-11-14-LB5

ABC transporter permease
SEED: O-antigen export system, permease protein
KEGG: lipopolysaccharide transport system permease protein

70 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01800 ABC transporter permease cofit 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17700 ABC transporter permease strong 63 99
o Phocaeicola dorei CL03T12C01 ABI39_RS20530 ABC transporter permease insig. 55 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06735 ABC transporter permease strong 55 100
  Phocaeicola dorei CL03T12C01 ABI39_RS13680 ABC transporter permease insig. 54 99
o Castellaniella sp019104865 MT123 ABCV34_RS12950 ABC transporter permease insig. 42 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component insig. 36 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1845 O-antigen export system, permease protein strong 35 93
o Desulfovibrio vulgaris Miyazaki F DvMF_2701 ABC-2 type transporter (RefSeq) no data 33 93
o Klebsiella michiganensis M5al BWI76_RS18990 ABC transporter permease cofit 30 89
o Pseudomonas sp. S08-1 OH686_11970 O-antigen export system permease protein RfbD strong 29 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_337 O-antigen export system permease protein RfbD strong 29 93
o Paraburkholderia graminis OAS925 ABIE53_001154 lipopolysaccharide transport system permease protein strong 29 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01668 hypothetical protein strong 28 92
o Pseudomonas putida KT2440 PP_1778 Lipopolysaccharide ABC export system, permease protein strong 29 77
  Paraburkholderia graminis OAS925 ABIE53_001145 lipopolysaccharide transport system permease protein strong 27 90
o Burkholderia phytofirmans PsJN BPHYT_RS21440 sugar ABC transporter permease insig. 28 99
o Pseudomonas fluorescens FW300-N2E3 AO353_10255 ABC transporter sig. 25 93
o Serratia liquefaciens MT49 IAI46_08125 ABC transporter permease no data 27 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS25730 ABC transporter permease strong 25 91
o Pseudomonas syringae pv. syringae B728a Psyr_0917 ABC-2 strong 24 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0917 ABC-2 strong 24 93
o Desulfovibrio vulgaris Hildenborough JW710 DVUA0077 ABC transporter, permease protein (TIGR) no data 28 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2336 O-antigen export system permease protein RfbD sig. 25 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4240 O-antigen export system permease protein RfbD insig. 26 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04827 lipopolysaccharide transport system permease protein no data 24 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1963 O-antigen export system permease protein RfbD sig. 24 93
o Bosea sp. OAE506 ABIE41_RS03025 ABC transporter permease no data 28 93
o Rahnella sp. WP5 EX31_RS11480 ABC transporter permease cofit 28 90
o Azospirillum brasilense Sp245 AZOBR_RS33925 ABC transporter strong 28 92
  Pseudomonas fluorescens FW300-N2E3 AO353_02005 hypothetical protein insig. 27 90
o Pseudomonas fluorescens FW300-N2C3 AO356_11825 ABC transporter strong 24 93
o Magnetospirillum magneticum AMB-1 AMB_RS05435 ABC transporter permease cofit 25 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4513.1 O-antigen export system permease protein RfbD no data 25 93
o Pseudomonas sp. RS175 PFR28_04556 hypothetical protein sig. 25 94
o Azospirillum sp. SherDot2 MPMX19_06721 hypothetical protein no data 25 93
o Bifidobacterium breve UCC2003 BBR_RS19765 ABC transporter permease no data 25 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05655 ABC transporter permease cofit 25 90
o Rhodanobacter sp. FW510-T8 OKGIIK_01190 Transport permease protein cofit 25 92
o Synechococcus elongatus PCC 7942 Synpcc7942_1126 ABC transporter permease protein strong 25 88
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18750 ABC transporter permease no data 22 91
o Rhodanobacter denitrificans MT42 LRK55_RS05405 ABC transporter permease strong 25 88
  Pseudomonas fluorescens FW300-N2C3 AO356_00760 sugar ABC transporter permease insig. 25 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_209 O-antigen export system permease protein RfbD insig. 22 93
o Pseudomonas simiae WCS417 PS417_20640 sugar ABC transporter permease no data 26 93
  Acidovorax sp. GW101-3H11 Ac3H11_1901 ABC transporter permease protein no data 26 71
  Caulobacter crescentus NA1000 CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component no data 25 80
  Caulobacter crescentus NA1000 Δfur CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component cofit 25 80
  Burkholderia phytofirmans PsJN BPHYT_RS04295 ABC transporter insig. 26 78
o Rhodospirillum rubrum S1H Rru_B0027 ABC-2 (NCBI) no data 28 83
o Pantoea sp. MT58 IAI47_07010 ABC transporter permease cofit 25 90
  Pseudomonas syringae pv. syringae B728a Psyr_0610 ABC-2 insig. 27 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0610 ABC-2 insig. 27 74
o Variovorax sp. OAS795 ABID97_RS05720 ABC transporter permease no data 24 96
o Mycobacterium tuberculosis H37Rv Rv3783 Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD no data 26 83
o Variovorax sp. SCN45 GFF4630 O-antigen export system permease protein RfbD no data 23 95
o Lysobacter sp. OAE881 ABIE51_RS04300 ABC transporter permease no data 22 96
  Escherichia fergusonii Becca EFB2_00855 Polysialic acid transport protein KpsM insig. 22 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4626 O-antigen export system permease protein RfbD no data 22 92
  Escherichia coli Nissle 1917 ECOLIN_RS17035 ABC transporter permease no data 22 87
  Escherichia coli BL21 ECD_02828 Polysialic acid transport protein kpsM cofit 22 87
  Erwinia tracheiphila SCR3 LU632_RS08880 ABC transporter permease cofit 24 74
o Alteromonas macleodii MIT1002 MIT1002_00975 Polysialic acid transport protein KpsM no data 22 89
  Rahnella sp. WP5 EX31_RS18920 ABC transporter permease insig. 20 87
  Pseudomonas sp. S08-1 OH686_00520 hypothetical protein insig. 23 85
  Burkholderia phytofirmans PsJN BPHYT_RS33205 ABC transporter no data 23 70
  Azospirillum brasilense Sp245 AZOBR_RS33470 sugar ABC transporter permease strong 23 82
  Escherichia coli ECOR38 HEPCGN_18100 kpsM Polysialic acid transport protein strong 21 87
  Dickeya dadantii 3937 DDA3937_RS18670 ABC transporter permease strong 23 91
  Ralstonia solanacearum PSI07 RPSI07_RS19815 ABC transporter permease insig. 19 87