Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 100 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 86 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 83 | 100 |
o | Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 82 | 100 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 82 | 100 |
o | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 67 | 99 |
o | Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 55 | 99 |
o | Pseudomonas stutzeri RCH2 | Psest_3659 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 54 | 99 |
o | Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 53 | 99 |
o | Pseudomonas simiae WCS417 | PS417_25765 | | transcriptional regulator | insig. | 54 | 99 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 53 | 99 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1209 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 54 | 99 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_07270 | | transcriptional regulator | insig. | 54 | 99 |
| Pseudomonas sp. RS175 | PFR28_04055 | | Response regulator UvrY | strong | 54 | 99 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS27420 | | response regulator transcription factor | insig. | 54 | 99 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS27420 | | response regulator transcription factor | insig. | 54 | 99 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 52 | 99 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4814 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 54 | 99 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2537 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 53 | 99 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_14380 | | transcriptional regulator | insig. | 53 | 99 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | insig. | 53 | 99 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | insig. | 53 | 99 |
o | Erwinia tracheiphila SCR3 | LU632_RS03195 | | response regulator transcription factor | strong | 48 | 99 |
o | Pseudomonas putida KT2440 | PP_0410 | | DNA-binding response regulator UhpA | strong | 54 | 99 |
| Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 48 | 100 |
o | Pectobacterium carotovorum WPP14 | HER17_RS10030 | | response regulator transcription factor | cofit | 50 | 99 |
o | Dickeya dianthicola ME23 | DZA65_RS12190 | | response regulator transcription factor | insig. | 48 | 99 |
o | Dickeya dianthicola 67-19 | HGI48_RS11705 | | response regulator | insig. | 49 | 99 |
o | Dickeya dadantii 3937 | DDA3937_RS11645 | | response regulator transcription factor | insig. | 48 | 99 |
| Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 47 | 99 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 47 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 47 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 47 | 99 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 46 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 46 | 99 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS13890 | | LuxR family transcriptional regulator | strong | 45 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 46 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27730 | | LuxR family transcriptional regulator | no data | 45 | 100 |
| Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 45 | 99 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 45 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09600 | | LuxR family transcriptional regulator | insig. | 48 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 44 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 44 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS36960 | | response regulator transcription factor | insig. | 43 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | no data | 42 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10275 | | LuxR family transcriptional regulator | sig. | 43 | 99 |
| Variovorax sp. SCN45 | GFF5597 | | Two-component transcriptional response regulator, LuxR family | insig. | 43 | 99 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3685 | | DNA-binding response regulator, LuxR family | insig. | 41 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 41 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 41 | 98 |
| Dechlorosoma suillum PS | Dsui_2158 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 42 | 99 |
| Variovorax sp. OAS795 | ABID97_RS07360 | | response regulator transcription factor | strong | 41 | 99 |
| Variovorax sp. SCN45 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | cofit | 41 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 40 | 98 |
| Variovorax sp. SCN45 | GFF850 | | Two-component transcriptional response regulator, LuxR family | insig. | 41 | 97 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02005 | | DNA-binding response regulator | insig. | 45 | 100 |
| Ralstonia solanacearum UW163 | UW163_RS15330 | | DNA-binding response regulator | insig. | 45 | 100 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1948 | | Transcriptional regulatory protein UhpA | insig. | 44 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 37 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 39 | 98 |
| Ralstonia solanacearum GMI1000 | RS_RS00950 | | DNA-binding response regulator | strong | 44 | 100 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS20025 | | response regulator transcription factor | insig. | 44 | 100 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01334 | | two component transcriptional regulator, LuxR family | no data | 41 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_005478 | | two-component system invasion response regulator UvrY | sig. | 41 | 98 |
| Variovorax sp. SCN45 | GFF4727 | | Two-component transcriptional response regulator, LuxR family | insig. | 42 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS15210 | | DNA-binding response regulator | insig. | 43 | 100 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 37 | 99 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 35 | 99 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | insig. | 40 | 99 |
| Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 37 | 99 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 35 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32670 | | response regulator transcription factor | insig. | 42 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS11530 | | LuxR family transcriptional regulator | insig. | 40 | 98 |
o | Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 35 | 100 |
o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 35 | 100 |
o | Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 100 |
| Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 36 | 100 |
| Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 100 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 34 | 99 |
o | Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 36 | 99 |
o | Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 99 |
| Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 100 |
| Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 100 |
o | Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 35 | 100 |
o | Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 100 |
o | Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 100 |
o | Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 100 |
o | Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 100 |
o | Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 100 |
o | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 100 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02715 | | response regulator | insig. | 37 | 99 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 100 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1417 | | Regulatory protein, LuxR:Response regulator receiver | cofit | 40 | 99 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 35 | 99 |
o | Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 34 | 100 |
o | Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 34 | 100 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 100 |
| Variovorax sp. OAS795 | ABID97_RS12700 | | response regulator transcription factor | insig. | 42 | 99 |
o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 34 | 100 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 40 | 99 |