| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Agrobacterium fabrum C58 | Atu3134 | | AraC family transcriptional regulator | strong | 100 | 100 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10705 | | response regulator | insig. | 38 | 25 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1614 | | transcriptional regulator, AraC family (RefSeq) | insig. | 41 | 23 |
| | Variovorax sp. SCN45 | GFF925 | | hypothetical protein | insig. | 32 | 32 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08455 | | AraC family transcriptional regulator | insig. | 36 | 24 |
| | Pseudomonas sp. DMC3 | GFF1555 | | RCS-specific HTH-type transcriptional activator RclR | cofit | 36 | 34 |
| | Pseudomonas simiae WCS417 | PS417_13580 | | AraC family transcriptional regulator | insig. | 34 | 32 |
| | Pseudomonas stutzeri RCH2 | Psest_1369 | | AraC-type DNA-binding domain-containing proteins | insig. | 33 | 27 |
| | Pseudomonas stutzeri RCH2 | Psest_3822 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 44 | 22 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 34 | 25 |
| | Pseudomonas stutzeri RCH2 | Psest_4103 | | AraC-type DNA-binding domain-containing proteins | insig. | 40 | 25 |
| | Serratia liquefaciens MT49 | IAI46_07020 | | AraC family transcriptional regulator | insig. | 32 | 30 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2886 | | transcriptional regulator, AraC family (TIGR) | insig. | 35 | 24 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS08990 | | AraC family transcriptional regulator | cofit | 30 | 33 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3667 | | transcriptional regulator (NCBI ptt file) | insig. | 33 | 25 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02694 | | response regulator receiver domain protein | insig. | 38 | 22 |
| | Sinorhizobium meliloti 1021 | SMa2133 | | hypothetical protein | insig. | 41 | 21 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_01030 | | AraC family transcriptional regulator | insig. | 29 | 36 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2359 | | Transcriptional regulator, AraC family | insig. | 42 | 24 |
| | Pseudomonas sp. BP01 | JOY50_RS10660 | | AraC family transcriptional regulator | insig. | 31 | 31 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3465 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 30 | 25 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10210 | | helix-turn-helix domain-containing protein | insig. | 30 | 44 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS09215 | | AraC family transcriptional regulator | insig. | 26 | 81 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS09555 | | AraC family transcriptional regulator | insig. | 26 | 81 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS01165 | | helix-turn-helix transcriptional regulator | insig. | 34 | 22 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1968 | | Transcriptional regulator, AraC family | insig. | 32 | 33 |
| | Pantoea sp. MT58 | IAI47_03205 | | AraC family transcriptional regulator | insig. | 38 | 23 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS16490 | | AraC family transcriptional regulator | cofit | 38 | 23 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18230 | | MmsAB operon transcriptional regulator MmsR | insig. | 35 | 25 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42005 | mmsR;inference=COORDINATES | MmsAB operon transcriptional regulator MmsR | sig. | 35 | 25 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0480 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 33 | 29 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14105 | | AraC family transcriptional regulator | insig. | 30 | 47 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS43005 | | AraC family transcriptional regulator | insig. | 30 | 47 |
| | Marinobacter adhaerens HP15 | HP15_905 | | protein containing helix-turn-helix, AraC domain | insig. | 26 | 77 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08080 | | AraC family transcriptional regulator | insig. | 41 | 23 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14570 | araC | AraC family transcriptional regulator | insig. | 40 | 27 |
| | Pseudomonas putida KT2440 | PP_2234 | | Transcriptional regulator, AraC family | insig. | 35 | 38 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS03430 | | AraC family transcriptional regulator | insig. | 32 | 23 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05800 | | AraC family transcriptional regulator | insig. | 30 | 23 |
| | Serratia liquefaciens MT49 | IAI46_05420 | | helix-turn-helix transcriptional regulator | insig. | 27 | 38 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17100 | | AraC family transcriptional regulator | insig. | 35 | 25 |
| | Pseudomonas orientalis W4I3 | QF045_RS27330 | | GlxA family transcriptional regulator | insig. | 34 | 33 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS08385 | | helix-turn-helix domain-containing protein | insig. | 30 | 38 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19115 | | AraC family transcriptional regulator | insig. | 36 | 21 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS15150 | mmsR;inference=COORDINATES | MmsAB operon transcriptional regulator MmsR | insig. | 35 | 25 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS02565 | | helix-turn-helix domain-containing protein | insig. | 30 | 38 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4178 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 37 | 21 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14425 | | AraC family transcriptional regulator | insig. | 33 | 23 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14425 | | AraC family transcriptional regulator | sig. | 33 | 23 |
| | Rahnella sp. WP5 | EX31_RS04165 | | HTH-type transcriptional activator RhaR | insig. | 33 | 27 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23320 | | AraC family transcriptional regulator | insig. | 31 | 22 |
| | Rhodopseudomonas palustris CGA009 | TX73_011040 | | AraC family transcriptional regulator | insig. | 27 | 39 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32160 | | helix-turn-helix domain-containing protein | insig. | 39 | 22 |
| | Dickeya dadantii 3937 | DDA3937_RS14520 | | AraC family transcriptional regulator | insig. | 33 | 28 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3728 | | Transcriptional Regulator, AraC family | insig. | 32 | 34 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4396 | | transcriptional regulator (NCBI ptt file) | sig. | 31 | 26 |
| | Pseudomonas segetis P6 | ACVTMO_RS16320 | | AraC family transcriptional regulator | insig. | 26 | 44 |
| | Pseudomonas putida KT2440 | PP_3439 | | Transcriptional regulator, AraC family | insig. | 31 | 35 |
| | Pseudomonas putida KT2440 | PP_2383 | | Transcriptional regulator, AraC family | sig. | 31 | 31 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00550 | | AraC family transcriptional regulator | insig. | 30 | 34 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS24475 | | AraC family transcriptional regulator | insig. | 39 | 23 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03582 | | response regulator receiver domain protein | cofit | 36 | 23 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19245 | | AraC family transcriptional regulator | insig. | 32 | 32 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16740 | | AraC family transcriptional regulator | insig. | 30 | 34 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40485 | | AraC family transcriptional regulator | insig. | 30 | 34 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12375 | | AraC family transcriptional regulator | sig. | 22 | 75 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05380 | | transcriptional regulator, AraC family | insig. | 39 | 23 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39550 | | AraC family transcriptional regulator | insig. | 33 | 20 |
| | Rahnella sp. WP5 | EX31_RS17960 | | AraC family transcriptional regulator | insig. | 31 | 51 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11370 | | two-component regulator propeller domain-containing protein | insig. | 27 | 38 |
| | Paraburkholderia graminis OAS925 | ABIE53_006443 | | AraC-like DNA-binding protein | sig. | 39 | 23 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS00810 | | helix-turn-helix domain-containing protein | insig. | 39 | 24 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02432 | | transcriptional regulator, AraC family | strong | 36 | 21 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05179 | | HTH-type transcriptional activator RhaR | cofit | 33 | 36 |
| | Pantoea sp. MT58 | IAI47_17685 | | AraC family transcriptional regulator | insig. | 31 | 41 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22960 | | AraC family transcriptional regulator | insig. | 25 | 73 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10015 | | AraC family transcriptional regulator | insig. | 37 | 29 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS16455 | | AraC family transcriptional regulator | insig. | 34 | 20 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00290 | | helix-turn-helix transcriptional regulator | insig. | 33 | 22 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_943 | | Transcriptional regulator, AraC family | insig. | 31 | 38 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02730 | | response regulator | insig. | 28 | 33 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS02180 | | two-component regulator propeller domain-containing protein | insig. | 27 | 34 |
| | Pseudomonas sp. DMC3 | GFF1052 | | HTH-type transcriptional activator RhaR | cofit | 41 | 20 |
| | Pseudomonas simiae WCS417 | PS417_14185 | | transcriptional regulator | insig. | 35 | 23 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6006 | | L-rhamnose operon transcriptional activator RhaR | insig. | 34 | 22 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS02010 | | response regulator | insig. | 28 | 33 |
| | Agrobacterium fabrum C58 | Atu3227 | | AraC family transcriptional regulator | insig. | 39 | 21 |
| | Pseudomonas sp. SVBP6 | COO64_RS23670 | | AraC family transcriptional regulator | insig. | 37 | 24 |
| | Pseudomonas simiae WCS417 | PS417_25355 | | AraC family transcriptional regulator | insig. | 33 | 33 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS26995 | | GlxA family transcriptional regulator | insig. | 32 | 33 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS26995 | | GlxA family transcriptional regulator | insig. | 32 | 33 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4294 | | AraC-type DNA-binding domain-containing proteins | insig. | 30 | 32 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 39 | 23 |
| | Azospirillum sp. SherDot2 | MPMX19_03575 | | HTH-type transcriptional regulator NimR | insig. | 32 | 29 |
| | Serratia liquefaciens MT49 | IAI46_16505 | | AraC family transcriptional regulator | insig. | 29 | 43 |
| | Marinobacter adhaerens HP15 | HP15_1642 | | transcriptional Regulator, AraC family protein | insig. | 29 | 32 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29395 | | AraC family transcriptional regulator | insig. | 28 | 34 |
| | Dechlorosoma suillum PS | Dsui_2181 | | DNA-binding domain-containing protein, AraC-type | insig. | 42 | 20 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04977 | | response regulator receiver domain protein | cofit | 36 | 21 |
| | Ralstonia solanacearum GMI1000 | RS_RS09150 | | AraC family transcriptional regulator | insig. | 35 | 20 |