Homologs of AMB_RS21900 from Magnetospirillum magneticum AMB-1

RNA 2',3'-cyclic phosphodiesterase
SEED: 2'-5' RNA ligase
KEGG: 2'-5' RNA ligase

64 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS21900 RNA 2',3'-cyclic phosphodiesterase no data 100 100
o Azospirillum brasilense Sp245 AZOBR_RS02280 2'-5' RNA ligase no data 53 100
o Azospirillum sp. SherDot2 MPMX19_02595 RNA 2',3'-cyclic phosphodiesterase insig. 52 99
o Rhodospirillum rubrum S1H Rru_A3649 2',5' RNA ligase (NCBI) insig. 42 99
o Agrobacterium fabrum C58 Atu2678 2'-5' RNA ligase sig. 38 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12890 RNA 2',3'-cyclic phosphodiesterase cofit 39 99
o Rhizobium sp. OAE497 ABIE40_RS18230 RNA 2',3'-cyclic phosphodiesterase insig. 39 99
o Sinorhizobium meliloti 1021 SMc03835 2'-5' RNA ligase sig. 38 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2766 2'-5' RNA ligase insig. 38 99
o Caulobacter crescentus NA1000 CCNA_03776 2'-5' RNA ligase strong 38 95
o Caulobacter crescentus NA1000 Δfur CCNA_03776 2'-5' RNA ligase cofit 38 95
o Rhodopseudomonas palustris CGA009 TX73_001005 RNA 2',3'-cyclic phosphodiesterase insig. 38 99
o Bosea sp. OAE506 ABIE41_RS04825 RNA 2',3'-cyclic phosphodiesterase insig. 36 100
o Marinobacter adhaerens HP15 HP15_881 2',5' RNA ligase insig. 31 99
o Cupriavidus basilensis FW507-4G11 RR42_RS21505 hypothetical protein insig. 36 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0039 2'-5' RNA ligase insig. 30 99
o Methanococcus maripaludis S2 MMP_RS03220 RNA 2' 3'-cyclic phosphodiesterase sig. 23 98
o Methanococcus maripaludis JJ MMJJ_RS01850 RNA 2',3'-cyclic phosphodiesterase insig. 23 98
o Erwinia tracheiphila SCR3 LU632_RS20070 thpR RNA 2',3'-cyclic phosphodiesterase insig. 33 98
  Alteromonas macleodii MIT1002 MIT1002_00405 2'-5'-RNA ligase insig. 35 81
o Klebsiella michiganensis M5al BWI76_RS05025 2'-5' RNA ligase sig. 29 98
o Shewanella amazonensis SB2B Sama_2974 putative 2'-5' RNA ligase (RefSeq) insig. 28 99
  Desulfovibrio vulgaris Miyazaki F DvMF_0904 2'-5' RNA ligase (RefSeq) insig. 39 56
o Pantoea sp. MT58 IAI47_15625 RNA 2',3'-cyclic phosphodiesterase insig. 29 98
o Escherichia coli ECRC101 OKFHMN_10335 thpR RNA 2',3'-cyclic phosphodiesterase insig. 29 98
o Escherichia coli ECRC101 MCAODC_00850 thpR RNA 2',3'-cyclic phosphodiesterase insig. 29 98
o Escherichia coli ECRC102 NIAGMN_08185 thpR RNA 2',3'-cyclic phosphodiesterase insig. 29 98
o Escherichia coli ECRC98 JDDGAC_13930 thpR RNA 2',3'-cyclic phosphodiesterase no data 29 98
o Escherichia coli ECRC99 KEDOAH_17820 thpR RNA 2',3'-cyclic phosphodiesterase no data 29 98
o Escherichia coli BL21 ECD_00146 2'-5' RNA ligase cofit 29 98
o Pectobacterium carotovorum WPP14 HER17_RS05590 RNA 2',3'-cyclic phosphodiesterase cofit 29 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF85 '2'-5' RNA ligase' transl_table=11 insig. 28 99
  Escherichia coli ECOR27 NOLOHH_02680 thpR RNA 2',3'-cyclic phosphodiesterase cofit 30 80
  Escherichia coli ECRC62 BNILDI_08990 thpR RNA 2',3'-cyclic phosphodiesterase insig. 30 80
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03515 'RNA 2',3'-cyclic phosphodiesterase' transl_table=11 insig. 30 80
  Escherichia coli BW25113 b0147 yadP orf, hypothetical protein (VIMSS) strong 30 80
  Rahnella sp. WP5 EX31_RS03240 RNA 2',3'-cyclic phosphodiesterase insig. 29 83
  Serratia liquefaciens MT49 IAI46_21200 RNA 2',3'-cyclic phosphodiesterase insig. 29 83
  Escherichia coli Nissle 1917 ECOLIN_RS00825 RNA 2',3'-cyclic phosphodiesterase no data 30 80
  Escherichia coli Nissle 1917 ECOLIN_RS25975 RNA 2',3'-cyclic phosphodiesterase no data 30 80
  Escherichia fergusonii Becca EFB2_03897 RNA 2',3'-cyclic phosphodiesterase insig. 30 80
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12700 RNA 2',3'-cyclic phosphodiesterase insig. 30 99
  Escherichia coli ECOR38 HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase cofit 30 80
  Ralstonia solanacearum GMI1000 RS_RS11870 RNA 2',3'-cyclic phosphodiesterase insig. 34 62
o Enterobacter sp. TBS_079 MPMX20_00833 RNA 2',3'-cyclic phosphodiesterase insig. 29 99
o Shewanella sp. ANA-3 Shewana3_0619 2'-5' RNA ligase (RefSeq) cofit 29 86
o Dickeya dadantii 3937 DDA3937_RS15925 RNA 2',3'-cyclic phosphodiesterase insig. 27 98
o Shewanella loihica PV-4 Shew_3126 2'-5' RNA ligase (RefSeq) insig. 28 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS28000 RNA 2',3'-cyclic phosphodiesterase insig. 32 85
o Lysobacter sp. OAE881 ABIE51_RS12220 RNA 2',3'-cyclic phosphodiesterase insig. 30 99
o Dickeya dianthicola 67-19 HGI48_RS16040 RNA 2',3'-cyclic phosphodiesterase insig. 26 98
o Dickeya dianthicola ME23 DZA65_RS17125 RNA 2',3'-cyclic phosphodiesterase insig. 26 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00235 2'-5' RNA ligase family protein insig. 31 91
  Enterobacter asburiae PDN3 EX28DRAFT_3736 2'-5' RNA ligase insig. 27 83
  Pseudomonas putida KT2440 PP_2424 putative 2'-5' RNA ligase insig. 30 99
  Pseudomonas stutzeri RCH2 Psest_3556 2'-5' RNA ligase insig. 27 99
  Pseudomonas sp. S08-1 OH686_01815 2'-5' RNA ligase insig. 32 100
  Rhodanobacter sp. FW510-T8 OKGIIK_04420 thpR RNA 2',3'-cyclic phosphodiesterase insig. 30 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4348 2'-5' RNA ligase no data 31 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15780 2'-5' RNA ligase family protein insig. 32 84
  Shewanella oneidensis MR-1 SO0627 putative 2'-5' RNA ligase (NCBI ptt file) insig. 26 84
  Castellaniella sp019104865 MT123 ABCV34_RS12550 RNA 2',3'-cyclic phosphodiesterase insig. 29 98
  Dechlorosoma suillum PS Dsui_2392 2''-5'' RNA ligase insig. 29 85
  Rhodanobacter denitrificans MT42 LRK55_RS15535 2'-5' RNA ligase family protein insig. 31 84