Homologs of ABZR88_RS04900 from Mucilaginibacter yixingensis YX-36 DSM 26809

DEAD/DEAH box helicase
SEED: ATP-dependent RNA helicase RhlE

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04900 DEAD/DEAH box helicase cofit 100 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21770 ATP-dependent RNA helicase insig. 67 74
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3600 Superfamily II DNA and RNA helicases sig. 58 84
o Bacteroides stercoris CC31F HMPREF1181_RS14365 DEAD/DEAH box helicase insig. 49 84
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01640 DEAD/DEAH box helicase sig. 49 88
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01240 DEAD/DEAH box helicase sig. 48 88
o Bacteroides ovatus ATCC 8483 BACOVA_02566 DEAD/DEAH box helicase insig. 50 84
o Bacteroides thetaiotaomicron VPI-5482 BT0831 ATP-dependent RNA helicase (NCBI ptt file) strong 49 83
o Phocaeicola dorei CL03T12C01 ABI39_RS16490 DEAD/DEAH box helicase strong 48 85
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00340 DEAD/DEAH box helicase strong 48 85
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 42 85
  Cellulophaga baltica 18 M666_RS18630 DEAD/DEAH box helicase insig. 41 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 42 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 41 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 42 80
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 37 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 38 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 39 86
  Shewanella loihica PV-4 Shew_2777 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 38 94
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 40 88
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 39 91
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 37 97
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 43 76
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 44 76
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 42 77
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 38 88
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 38 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 37 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 42 76
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 43 76
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 43 77
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 43 77
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 43 76
  Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 42 78
  Shewanella oneidensis MR-1 SO2571 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 76
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 43 77
  Rhodospirillum rubrum S1H Rru_A2718 DEAD/DEAH box helicase (NCBI) no data 43 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 42 77
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 43 76
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 43 76
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 76
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 39 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 42 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0511 Superfamily II DNA and RNA helicases insig. 40 85
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 39 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09210 DEAD/DEAH box helicase no data 39 86
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 39 85
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 43 77
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 42 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 40 87
  Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 37 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08975 DEAD/DEAH box helicase insig. 38 89
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 42 79
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 42 79
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE cofit 42 79
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE cofit 42 79
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 42 79
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE cofit 42 79
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE insig. 42 79
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 42 79
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE cofit 42 79
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 42 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 42 79
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 42 79
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 42 79
  Erwinia amylovora T8 OLJFJH_07275 DEAD/DEAH family ATP-dependent RNA helicase strong 41 78
  Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 40 80
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 43 79
  Shewanella sp. ANA-3 Shewana3_2376 DEAD/DEAH box helicase domain-containing protein (RefSeq) cofit 39 83
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 38 85
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 38 91
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 39 87
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 42 76
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 39 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 43 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 42 79
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 42 76
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 41 76
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 73
  Shewanella loihica PV-4 Shew_0950 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 41 77
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 37 94
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 40 77
  Shewanella loihica PV-4 Shew_2800 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 39 85
  Shewanella sp. ANA-3 Shewana3_2928 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 38 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 41 82
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 41 82
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 39 87
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 42 75
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 41 76
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 42 76
  Pseudomonas sp. S08-1 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) cofit 42 77
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 40 76
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 40 86
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 37 99
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 39 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07310 DEAD/DEAH box helicase insig. 41 79
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 42 76
  Enterobacter sp. TBS_079 MPMX20_04066 ATP-dependent RNA helicase DeaD insig. 40 77
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 40 77
  Shewanella amazonensis SB2B Sama_0383 ATP-dependent RNA helicase RhlE (RefSeq) insig. 36 94