Homologs of ABID97_RS05805 from Variovorax sp. OAS795

TRAP transporter large permease
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. OAS795 ABID97_RS05805 TRAP transporter large permease strong 100 100
o Bosea sp. OAE506 ABIE41_RS01370 TRAP transporter large permease insig. 71 99
o Cupriavidus basilensis FW507-4G11 RR42_RS34990 ABC transporter permease insig. 65 100
o Sinorhizobium meliloti 1021 SM_b20444 hypothetical protein insig. 62 98
o Rhizobium sp. OAE497 ABIE40_RS25810 TRAP transporter large permease insig. 62 97
  Bosea sp. OAE506 ABIE41_RS23665 TRAP transporter large permease insig. 62 98
o Agrobacterium fabrum C58 Atu3255 dicarboxylate ABC transporter permease insig. 61 95
  Sinorhizobium meliloti 1021 SM_b20297 permease insig. 42 97
  Bosea sp. OAE506 ABIE41_RS08865 TRAP transporter large permease insig. 47 97
  Bosea sp. OAE506 ABIE41_RS18670 TRAP transporter large permease insig. 43 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_08915 ABC transporter permease insig. 40 97
  Sinorhizobium meliloti 1021 SM_b20372 hypothetical protein insig. 41 97
  Bosea sp. OAE506 ABIE41_RS18720 TRAP transporter large permease insig. 41 97
o Azospirillum sp. SherDot2 MPMX19_06063 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 41 99
  Acidovorax sp. GW101-3H11 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 97
  Desulfovibrio vulgaris Miyazaki F DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 36 98
  Variovorax sp. SCN45 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component insig. 35 97
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 39 97
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 34 98
  Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 98
  Agrobacterium fabrum C58 Atu3156 ABC transporter permease insig. 36 96
  Variovorax sp. OAS795 ABID97_RS19635 TRAP transporter large permease insig. 36 97
  Castellaniella sp019104865 MT123 ABCV34_RS12260 TRAP transporter large permease insig. 35 99
  Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 36 99
  Fusobacterium nucleatum SB010 HUW76_03975 TRAP transporter large permease strong 36 97
  Castellaniella sp019104865 MT123 ABCV34_RS13970 TRAP transporter large permease subunit insig. 34 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF174 TRAP-type C4-dicarboxylate transport system, large permease component no data 37 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 34 100
  Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 35 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2823 dctM TRAP dicarboxylate transporter family protein (TIGR) insig. 35 98
  Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 35 97
  Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 34 98
  Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 34 98
  Sinorhizobium meliloti 1021 SM_b21436 C4-dicarboxylate transport system, permease large protein transmembrane insig. 35 92
  Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 34 98
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 32 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 38 96
  Pseudomonas stutzeri RCH2 Psest_4270 TRAP transporter, DctM subunit strong 35 99
  Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 34 98
  Rhodospirillum rubrum S1H Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) strong 34 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1781 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 98
  Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 34 100
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 36 99
  Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 34 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3864 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 97
  Bosea sp. OAE506 ABIE41_RS03210 TRAP transporter large permease insig. 34 97
  Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 36 97
  Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 36 97
  Castellaniella sp019104865 MT123 ABCV34_RS05060 TRAP transporter large permease insig. 37 97
  Shewanella oneidensis MR-1 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) insig. 35 97
  Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 34 91
  Rhodopseudomonas palustris CGA009 TX73_010560 TRAP transporter large permease subunit strong 32 98
  Escherichia coli ECOR38 HEPCGN_01270 C4-dicarboxylate ABC transporter cofit 35 96
  Variovorax sp. OAS795 ABID97_RS10330 TRAP transporter large permease strong 34 95
  Azospirillum brasilense Sp245 AZOBR_RS26625 dehydroascorbate transporter insig. 34 97
  Dinoroseobacter shibae DFL-12 Dshi_1832 TRAP dicarboxylate transporter, DctM subunit (RefSeq) sig. 32 97
  Dinoroseobacter shibae DFL-12 Dshi_0956 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 33 97
o Phaeobacter inhibens DSM 17395 PGA1_c13130 TRAP transporter, subunit DctM insig. 39 91
  Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 33 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 33 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3132 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 99
  Azospirillum sp. SherDot2 MPMX19_05803 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 100
  Sinorhizobium meliloti 1021 SM_b21351 C4-dicarboxylate large membrane transport protein insig. 37 99
  Escherichia coli Nissle 1917 ECOLIN_RS17390 TRAP transporter large permease subunit insig. 35 99
  Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 35 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 35 91
  Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 34 98
  Castellaniella sp019104865 MT123 ABCV34_RS07855 TRAP transporter large permease insig. 36 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2273 Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC insig. 32 98
  Agrobacterium fabrum C58 Atu2743 hypothetical protein insig. 33 97
  Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 35 91
  Azospirillum brasilense Sp245 AZOBR_RS16150 C4-dicarboxylate ABC transporter insig. 31 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3627 TRAP transporter, DctM subunit insig. 36 99
  Acidovorax sp. GW101-3H11 Ac3H11_3227 gluconate TRAP transporter, large permease component (from data) strong 36 90
  Shewanella sp. ANA-3 Shewana3_1414 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 35 98
  Bosea sp. OAE506 ABIE41_RS18535 TRAP transporter large permease insig. 32 97
  Azospirillum brasilense Sp245 AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter (from data) strong 35 96
  Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 34 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 34 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5506 TRAP-type C4-dicarboxylate transport system, large permease component insig. 35 90
  Sinorhizobium meliloti 1021 SMc00273 transmembrane protein insig. 35 92
  Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 34 93
  Azospirillum brasilense Sp245 AZOBR_RS30120 C4-dicarboxylate ABC transporter permease insig. 33 100
  Escherichia coli ECOR38 HEPCGN_09415 C4-dicarboxylate ABC transporter cofit 33 96
  Escherichia coli ECOR27 NOLOHH_11090 dctQ Tripartite ATP-independent periplasmic transporter, DctM component cofit 34 99
  Bosea sp. OAE506 ABIE41_RS24150 TRAP transporter large permease subunit insig. 34 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5016 TRAP-type C4-dicarboxylate transport system, large permease component insig. 33 97
  Acidovorax sp. GW101-3H11 Ac3H11_3520 TRAP-type C4-dicarboxylate transport system, large permease component insig. 32 97
  Klebsiella michiganensis M5al BWI76_RS24135 c4-dicarboxylate permease insig. 33 99
  Acidovorax sp. GW101-3H11 Ac3H11_4175 TRAP-type C4-dicarboxylate transport system, large permease component insig. 32 99
  Acidovorax sp. GW101-3H11 Ac3H11_1228 TRAP-type C4-dicarboxylate transport system, large permease component insig. 34 97
  Lysobacter sp. OAE881 ABIE51_RS02840 TRAP transporter large permease insig. 32 93
  Pseudomonas stutzeri RCH2 Psest_2124 D-gluconate TRAP transporter, large permease component (from data) strong 35 90
  Sinorhizobium meliloti 1021 SMa0250 dedA-like protein insig. 33 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03837 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 98
  Azospirillum brasilense Sp245 AZOBR_RS02725 C4-dicarboxylate ABC transporter insig. 33 98
  Acidovorax sp. GW101-3H11 Ac3H11_2071 TRAP-type C4-dicarboxylate transport system, large permease component insig. 33 92
  Dechlorosoma suillum PS Dsui_2534 TRAP transporter, DctM subunit cofit 32 99
  Shewanella loihica PV-4 Shew_1444 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) cofit 35 97
  Escherichia coli ECRC62 BNILDI_07135 TRAP transporter large permease insig. 34 98