Homologs of Sama_2742 from Shewanella amazonensis SB2B

ATP-dependent RNA helicase SrmB (RefSeq)
SEED: ATP-dependent RNA helicase SrmB
KEGG: ATP-dependent RNA helicase SrmB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 100 100
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 83 63
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 82 63
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 80 63
  Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 54 68
  Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 58 62
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB strong 54 67
  Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 56 65
  Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 54 65
  Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 55 65
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB strong 54 66
  Erwinia tracheiphila SCR3 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB cofit 54 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 57 61
  Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 53 66
  Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 57 63
  Klebsiella pneumoniae MKP103 KDGMDA_28495 ATP-dependent RNA helicase SrmB cofit 56 63
  Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 55 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 57 61
  Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 57 61
  Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 56 61
  Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 56 63
  Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 56 61
  Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 56 61
  Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 57 61
  Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 57 61
  Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli ECRC100 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB cofit 57 61
  Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB cofit 57 61
  Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 57 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 57 61
  Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB sig. 57 61
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 49 62
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 36 92
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 45 62
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 47 62
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 40 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 42 62
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 34 98
  Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 45 62
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 45 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 45 62
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 37 92
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 42 62
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 42 62
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 41 62
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 42 62
  Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 42 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 40 62
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 40 62
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 35 94
  Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 43 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 44 62
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 43 62
  Ralstonia sp. UNC404CL21Col ABZR87_RS09700 DEAD/DEAH box helicase strong 40 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 43 62
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 43 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 42 62
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 40 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 43 61
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 42 62
  Pseudomonas orientalis W4I3 QF045_RS26765 DEAD/DEAH box helicase insig. 42 62
  Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 43 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 43 61
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 42 62
  Ralstonia solanacearum PSI07 RPSI07_RS19465 ATP-dependent helicase insig. 40 61
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 42 62
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 42 62
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 42 62
  Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 43 61
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 43 65
  Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 43 62
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 42 62
  Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 43 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 43 61
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 42 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 42 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 42 61
  Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 43 61
  Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 42 61
  Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 42 61
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 44 60
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 42 61
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 36 80
  Pseudomonas segetis P6 ACVTMO_RS05445 DEAD/DEAH box helicase sig. 43 62
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 43 60
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 41 62
  Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 43 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 43 61
  Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 42 61
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 42 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 42 62
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 42 61
  Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 42 67
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 41 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 35 83
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 43 62