Homologs of Sama_0318 from Shewanella amazonensis SB2B

hypothetical protein (RefSeq)
SEED: Integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_0318 hypothetical protein (RefSeq) insig. 100 100
  Alteromonas macleodii MIT1002 MIT1002_04073 Putative prophage CPS-53 integrase insig. 40 71
  Erwinia tracheiphila SCR3 LU632_RS22055 integrase arm-type DNA-binding domain-containing protein insig. 39 74
  Shewanella sp. ANA-3 Shewana3_3779 phage integrase family protein (RefSeq) cofit 35 77
  Erwinia amylovora T8 OLJFJH_05740 Tyr recombinase domain-containing protein insig. 46 46
  Rahnella sp. WP5 EX31_RS14515 site-specific integrase insig. 32 71
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3250 Integrase insig. 31 82
  Escherichia fergusonii Becca EFB2_00168 Prophage integrase IntA insig. 31 74
  Escherichia coli ECRC98 JDDGAC_25445 integrase cofit 32 73
  Dickeya dianthicola ME23 DZA65_RS16600 site-specific integrase insig. 30 73
  Rhodospirillum rubrum S1H Rru_A0354 Phage integrase (NCBI) insig. 29 73
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01203 Prophage integrase IntA insig. 28 73
  Klebsiella michiganensis M5al BWI76_RS12025 integrase insig. 28 75
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 29 75
  Pseudomonas aeruginosa PA14 IKLFDK_19405 integrase insig. 28 72
  Shewanella oneidensis MR-1 SO4258 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 30 57
o Rhodopseudomonas palustris CGA009 TX73_011375 tyrosine-type recombinase/integrase insig. 28 82
  Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 26 72
  Escherichia coli ECOR38 HEPCGN_24090 integrase insig. 26 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS06555 site-specific integrase insig. 26 72
  Escherichia coli ECRC100 OKFHMN_00640 integrase cofit 26 74
  Escherichia coli ECRC101 MCAODC_22445 integrase insig. 26 74
  Escherichia coli ECRC98 JDDGAC_06725 integrase cofit 26 74
  Escherichia coli ECRC99 KEDOAH_24725 integrase no data 26 74
  Escherichia coli ECRC102 NIAGMN_24765 integrase insig. 26 74
  Serratia liquefaciens MT49 IAI46_13845 tyrosine-type recombinase/integrase insig. 28 78
  Shewanella oneidensis MR-1 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 27 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2112 Phage integrase insig. 25 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_08825 integrase insig. 29 79
  Burkholderia phytofirmans PsJN BPHYT_RS32385 integrase insig. 29 73
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1748 Integrase insig. 32 43
  Pseudomonas sp. DMC3 GFF4956 Prophage integrase IntA insig. 26 76
  Escherichia coli ECRC62 BNILDI_08820 integrase cofit 26 76
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 24 70
  Escherichia coli ECOR38 HEPCGN_00365 integrase insig. 25 74
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4358 Integrase insig. 27 73
  Pseudomonas sp. BP01 JOY50_RS21995 integrase domain-containing protein insig. 25 74
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4378 Integrase insig. 26 71
  Pseudomonas stutzeri RCH2 Psest_4016 Integrase insig. 25 75
  Dickeya dadantii 3937 DDA3937_RS01320 site-specific integrase insig. 23 75
  Pseudomonas sp. S08-1 OH686_23050 hypothetical protein insig. 28 57
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 25 75
  Escherichia coli ECRC99 KEDOAH_03580 Integrase no data 29 57
  Escherichia coli ECRC100 OKFHMN_24570 Integrase cofit 29 57
  Escherichia coli ECRC98 JDDGAC_28680 Integrase insig. 29 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3387 Phage integrase insig. 25 75
  Dechlorosoma suillum PS Dsui_0218 Integrase sig. 26 73
  Erwinia tracheiphila SCR3 LU632_RS17630 integrase domain-containing protein insig. 25 75
  Shewanella loihica PV-4 Shew_1267 phage integrase family protein (RefSeq) insig. 25 70
  Pantoea sp. MT58 IAI47_19955 site-specific integrase insig. 29 51
  Pseudomonas sp. DMC3 GFF4361 Prophage integrase IntA cofit 25 72
  Escherichia coli ECRC101 MCAODC_13060 integrase cofit 24 74
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 22 74
  Ralstonia solanacearum GMI1000 RS_RS09580 DUF4102 domain-containing protein insig. 26 73
  Shewanella oneidensis MR-1 SO3013 site-specific recombinase, phage integrase family (NCBI ptt file) strong 25 75
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 23 78
  Marinobacter adhaerens HP15 HP15_1081 phage integrase family protein insig. 28 53
  Castellaniella sp019104865 MT123 ABCV34_RS03400 integrase arm-type DNA-binding domain-containing protein insig. 25 71
  Pseudomonas simiae WCS417 PS417_24120 integrase insig. 24 79
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 26 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_15355 integrase insig. 25 68
  Pseudomonas fluorescens SBW25 PFLU_RS24915 tyrosine-type recombinase/integrase insig. 24 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24915 tyrosine-type recombinase/integrase insig. 24 74
  Dickeya dianthicola 67-19 HGI48_RS05235 tyrosine-type recombinase/integrase insig. 26 69
  Escherichia coli ECRC100 OKFHMN_09385 fimB integrase insig. 27 70
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 27 70
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase cofit 27 70
  Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 26 72
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 24 72
  Dickeya dadantii 3937 DDA3937_RS09105 tyrosine-type recombinase/integrase insig. 25 73
  Enterobacter sp. TBS_079 MPMX20_03492 Prophage integrase IntA insig. 25 75
  Serratia liquefaciens MT49 IAI46_15305 integrase arm-type DNA-binding domain-containing protein insig. 25 74
  Pseudomonas sp. S08-1 OH686_21775 Phage integrase insig. 24 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 24 76
  Erwinia tracheiphila SCR3 LU632_RS06490 site-specific integrase insig. 26 72
  Dickeya dianthicola ME23 DZA65_RS04000 tyrosine-type recombinase/integrase insig. 25 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein insig. 23 74
  Rahnella sp. WP5 EX31_RS01835 site-specific integrase insig. 28 52
  Shewanella sp. ANA-3 Shewana3_1791 phage integrase family protein (RefSeq) insig. 27 74
  Pseudomonas putida KT2440 PP_3889 putative Phage integrase insig. 25 55
  Shewanella oneidensis MR-1 SO0388 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 24 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1289.1 Integrase insig. 24 74
  Escherichia coli BW25113 b2622 intA CP4-57 prophage; integrase (NCBI) insig. 25 71
  Dickeya dianthicola 67-19 HGI48_RS10980 tyrosine-type recombinase/integrase insig. 23 74
  Rhodanobacter denitrificans MT42 LRK55_RS10445 tyrosine-type recombinase/integrase cofit 27 48
  Pectobacterium carotovorum WPP14 HER17_RS17450 integrase domain-containing protein insig. 25 76
  Cupriavidus basilensis FW507-4G11 RR42_RS18370 integrase insig. 25 74
  Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 25 74
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 25 67
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 26 69
  Pantoea sp. MT58 IAI47_04780 tyrosine-type recombinase/integrase insig. 27 57
  Dickeya dadantii 3937 DDA3937_RS03855 integrase insig. 24 71
  Magnetospirillum magneticum AMB-1 AMB_RS03365 site-specific integrase insig. 28 40
  Serratia liquefaciens MT49 IAI46_05415 tyrosine-type recombinase/integrase insig. 26 72
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 25 72
  Paraburkholderia graminis OAS925 ABIE53_000331 integrase insig. 24 65
  Pectobacterium carotovorum WPP14 HER17_RS10440 tyrosine-type recombinase/integrase cofit 23 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02321 Site-specific recombinase XerD insig. 24 66
  Serratia liquefaciens MT49 IAI46_19730 tyrosine-type recombinase/integrase insig. 24 79
  Rhodopseudomonas palustris CGA009 TX73_021145 site-specific integrase insig. 25 70