Homologs of Shew_3114 from Shewanella loihica PV-4

two component, sigma54 specific, Fis family transcriptional regulator (RefSeq)
SEED: Sigma-54 dependent DNA-binding response regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3114 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) strong 100 100
o Desulfovibrio vulgaris Hildenborough JW710 DVU1156 sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) insig. 37 98
  Desulfovibrio vulgaris Miyazaki F DvMF_0700 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 31 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3305 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) strong 33 99
  Pseudomonas sp. BP01 JOY50_RS14825 sigma-54 dependent transcriptional regulator insig. 30 91
  Pseudomonas putida KT2440 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein strong 31 91
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 30 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19085 sigma-54-dependent Fis family transcriptional regulator insig. 29 99
  Pseudomonas sp. SVBP6 COO64_RS16760 sigma-54 dependent transcriptional regulator insig. 30 89
  Desulfovibrio vulgaris Miyazaki F DvMF_2109 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 30 98
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 30 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 30 99
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 30 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1363 PEP-CTERM-box response regulator transcription factor strong 31 97
  Pseudomonas sp. S08-1 OH686_13325 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake cofit 33 89
  Azospirillum sp. SherDot2 MPMX19_03494 Regulatory protein AtoC insig. 30 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 30 99
  Dechlorosoma suillum PS Dsui_3486 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains cofit 30 93
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 29 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11070 sigma-54 dependent transcriptional regulator cofit 29 98
  Xanthobacter sp. DMC5 GFF4834 Regulatory protein AtoC insig. 31 99
  Desulfovibrio vulgaris Miyazaki F DvMF_2601 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 31 98
  Pseudomonas fluorescens FW300-N2E3 AO353_16265 Fis family transcriptional regulator strong 30 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1195 Sigma-54 dependent response regulator insig. 31 98
  Pseudomonas sp. S08-1 OH686_10640 nitrogen regulation protein NR(I) cofit 28 99
  Pseudomonas aeruginosa PA14 IKLFDK_06350 Fis family transcriptional regulator insig. 27 98
  Marinobacter adhaerens HP15 HP15_523 two component, sigma54 specific, transcriptional regulator, Fis family strong 31 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09115 sigma-54 dependent transcriptional regulator insig. 33 85
  Pseudomonas aeruginosa PA14 IKLFDK_00790 two-component response regulator PilR strong 30 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12650 sigma-54 dependent transcriptional regulator insig. 29 98
  Pseudomonas fluorescens SBW25 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator insig. 28 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator strong 28 91
  Pseudomonas simiae WCS417 PS417_05535 Fis family transcriptional regulator strong 28 91
  Dickeya dianthicola 67-19 HGI48_RS00425 two-component system response regulator VfmH cofit 31 98
  Dickeya dianthicola ME23 DZA65_RS00425 sigma-54-dependent Fis family transcriptional regulator cofit 31 98
  Pseudomonas aeruginosa PA14 IKLFDK_25855 DNA-binding response regulator insig. 31 93
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein insig. 29 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 29 99
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 29 99
  Pseudomonas putida KT2440 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG strong 29 99
  Pseudomonas fluorescens FW300-N2C3 AO356_09730 nitrogen regulation protein NR(I) strong 28 99
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 29 99
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC insig. 29 99
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 29 99
  Pseudomonas syringae pv. syringae B728a Psyr_3913 Helix-turn-helix, Fis-type insig. 28 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3913 Helix-turn-helix, Fis-type insig. 28 91
  Pseudomonas fluorescens FW300-N2E3 AO353_12145 nitrogen regulation protein NR(I) strong 28 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator insig. 28 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3826 Nitrogen regulation protein NR(I) strong 28 99
  Desulfovibrio vulgaris Miyazaki F DvMF_2679 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 31 98
  Pseudomonas sp. DMC3 GFF5115 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 30 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1611 Nitrogen regulation protein NR(I) strong 28 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4775 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake strong 29 89
  Pseudomonas sp. BP01 JOY50_RS09450 ntrC nitrogen regulation protein NR(I) cofit 29 99
  Ralstonia solanacearum GMI1000 RS_RS01635 sigma-54-dependent Fis family transcriptional regulator insig. 28 98
  Pseudomonas sp. RS175 PFR28_03376 C4-dicarboxylate transport transcriptional regulatory protein DctD sig. 29 89
  Pseudomonas syringae pv. syringae B728a Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) sig. 28 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) no data 28 99
  Azospirillum brasilense Sp245 AZOBR_RS14430 chemotaxis protein CheY strong 29 98
  Desulfovibrio vulgaris Miyazaki F DvMF_1260 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 29 98
  Pseudomonas fluorescens SBW25 PFLU_RS01685 nitrogen regulation protein NR(I) sig. 27 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01685 nitrogen regulation protein NR(I) strong 27 99
  Pseudomonas simiae WCS417 PS417_01635 nitrogen regulation protein NR(I) strong 27 99
  Xanthobacter sp. DMC5 GFF848 DNA-binding transcriptional regulator NtrC no data 30 98
  Pseudomonas sp. RS175 PFR28_04944 DNA-binding transcriptional regulator NtrC strong 27 99
  Phocaeicola dorei CL03T12C01 ABI39_RS02120 sigma-54-dependent Fis family transcriptional regulator insig. 29 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_776 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake insig. 29 89
  Pseudomonas stutzeri RCH2 Psest_3932 nitrogen regulation protein NR(I) strong 28 99
  Pseudomonas sp. RS175 PFR28_03462 C4-dicarboxylate transport transcriptional regulatory protein DctD strong 35 80
  Dickeya dadantii 3937 DDA3937_RS20820 two-component system response regulator VfmH strong 31 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05020 sigma-54 dependent transcriptional regulator strong 29 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_347 Nitrogen regulation protein NR(I) strong 28 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS11070 nitrogen regulation protein NR(I) strong 33 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02780 sigma-54-dependent Fis family transcriptional regulator strong 29 98
  Shewanella amazonensis SB2B Sama_0125 response regulator receiver protein (RefSeq) strong 29 98
  Pseudomonas sp. DMC3 GFF4081 DNA-binding transcriptional regulator NtrC strong 27 99
  Cupriavidus basilensis FW507-4G11 RR42_RS01705 Fis family transcriptional regulator insig. 32 88
  Cupriavidus basilensis FW507-4G11 RR42_RS03980 Fis family transcriptional regulator strong 31 89
  Rhodospirillum rubrum S1H Rru_A1385 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) cofit 31 99
  Methylophilus sp. DMC18 GFF2304 Regulatory protein AtoC cofit 29 98
  Rhodanobacter denitrificans MT42 LRK55_RS04800 sigma-54 dependent transcriptional regulator cofit 28 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_07640 sigma-54-dependent Fis family transcriptional regulator insig. 28 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10795 sigma-54-dependent Fis family transcriptional regulator insig. 28 98
  Ralstonia solanacearum UW163 UW163_RS02785 sigma-54-dependent Fis family transcriptional regulator insig. 28 98
  Azospirillum sp. SherDot2 MPMX19_04251 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 31 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS06635 sigma-54 dependent transcriptional regulator strong 30 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU0946 sigma-54 dependent transcriptional regulator/response regulator (TIGR) sig. 29 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04990 sigma-54 dependent transcriptional regulator cofit 28 98
  Rhodanobacter sp. FW510-T8 OKGIIK_01730 atoC sigma-54-dependent Fis family transcriptional regulator insig. 28 98
  Pseudomonas sp. SVBP6 COO64_RS13325 ntrC nitrogen regulation protein NR(I) insig. 28 99
  Azospirillum sp. SherDot2 MPMX19_01112 DNA-binding transcriptional regulator NtrC no data 29 98
  Acinetobacter radioresistens SK82 MPMX26_00162 Regulatory protein AtoC cofit 28 98
  Azospirillum sp. SherDot2 MPMX19_03461 Regulatory protein AtoC insig. 30 99
  Pseudomonas fluorescens FW300-N2C3 AO356_17800 C4-dicarboxylate ABC transporter strong 33 86
  Ralstonia solanacearum GMI1000 RS_RS06320 nitrogen regulation protein NR(I) no data 32 80
  Pseudomonas stutzeri RCH2 Psest_0705 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 30 99
  Methylophilus sp. DMC18 GFF1426 Transcriptional regulatory protein ZraR insig. 30 99
  Shewanella loihica PV-4 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 30 98
  Pseudomonas putida KT2440 PP_1401 C4-dicarboxylate transport transcriptional regulatory protein strong 31 93
  Azospirillum brasilense Sp245 AZOBR_RS18445 chemotaxis protein CheY insig. 30 98