Homologs of Shew_1445 from Shewanella loihica PV-4

dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data)
Original annotation: tripartite ATP-independent periplasmic transporter DctQ (RefSeq)
KEGG: C4-dicarboxylate transporter, DctQ subunit

89 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) cofit 100 100
o Shewanella sp. ANA-3 Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ (RefSeq) strong 69 100
o Shewanella amazonensis SB2B Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component (from data) strong 67 100
o Shewanella oneidensis MR-1 SO3135 C4-dicarboxylate transporter, putative (NCBI ptt file) insig. 67 98
o Castellaniella sp019104865 MT123 ABCV34_RS05055 TRAP transporter small permease insig. 33 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_09645 C4-dicarboxylate ABC transporter permease insig. 38 93
o Pseudomonas sp. RS175 PFR28_00120 C4-dicarboxylate TRAP transporter small permease protein DctQ insig. 29 94
o Phaeobacter inhibens DSM 17395 PGA1_c20670 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) strong 41 49
o Pseudomonas fluorescens SBW25 PFLU_RS16925 TRAP transporter small permease insig. 29 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16925 TRAP transporter small permease strong 29 95
o Pseudomonas simiae WCS417 PS417_14905 C4-dicarboxylate ABC transporter insig. 28 95
o Pseudomonas stutzeri RCH2 Psest_4269 C4-dicarboxylate transporter, DctQ subunit (from data) strong 26 94
o Rhodopseudomonas palustris CGA009 TX73_010555 TRAP transporter small permease strong 26 82
  Dechlorosoma suillum PS Dsui_3154 TRAP-type C4-dicarboxylate transport system, small permease component sig. 26 83
  Magnetospirillum magneticum AMB-1 AMB_RS04555 TRAP transporter small permease cofit 27 82
  Rhodospirillum rubrum S1H Rru_A3677 Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) strong 27 83
  Pseudomonas sp. RS175 PFR28_01612 hypothetical protein insig. 32 54
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1303 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 31 54
  Sinorhizobium meliloti 1021 SM_b20034 ABC transporter insig. 29 61
  Pseudomonas fluorescens FW300-N2C3 AO356_25635 C4-dicarboxylate ABC transporter permease insig. 30 54
  Dinoroseobacter shibae DFL-12 Dshi_1833 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 38 39
  Castellaniella sp019104865 MT123 ABCV34_RS13975 TRAP transporter small permease insig. 26 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS21095 TRAP transporter small permease insig. 28 53
o Azospirillum sp. SherDot2 MPMX19_00660 C4-dicarboxylate TRAP transporter small permease protein DctQ insig. 22 91
  Castellaniella sp019104865 MT123 ABCV34_RS07850 TRAP transporter small permease insig. 31 51
  Azospirillum sp. SherDot2 MPMX19_03527 hypothetical protein insig. 31 45
o Herbaspirillum seropedicae SmR1 HSERO_RS04245 C4-dicarboxylate ABC transporter permease insig. 23 80
  Azospirillum brasilense Sp245 AZOBR_RS09600 C4-dicarboxylate ABC transporter permease sig. 23 80
  Azospirillum sp. SherDot2 MPMX19_05868 hypothetical protein insig. 28 48
  Acidovorax sp. GW101-3H11 Ac3H11_1229 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 26 60
  Desulfovibrio vulgaris Hildenborough JW710 DVU0010 TRAP transporter, DctQ family (TIGR) insig. 39 34
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5017 TRAP-type C4-dicarboxylate transport system, small permease component insig. 33 45
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5229 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 24 54
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2428 TRAP-type C4-dicarboxylate transport system, small permease component insig. 27 53
  Azospirillum sp. SherDot2 MPMX19_04761 hypothetical protein insig. 27 59
  Variovorax sp. OAS795 ABID97_RS26065 TRAP transporter small permease insig. 27 52
  Agrobacterium fabrum C58 Atu3136 ABC transporter permease strong 28 46
  Fusobacterium nucleatum SB010 HUW76_03970 TRAP transporter small permease strong 26 56
  Castellaniella sp019104865 MT123 ABCV34_RS13665 TRAP transporter small permease insig. 27 50
  Dinoroseobacter shibae DFL-12 Dshi_4192 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 30 55
  Bosea sp. OAE506 ABIE41_RS18540 TRAP transporter small permease insig. 33 41
  Paraburkholderia graminis OAS925 ABIE53_006501 TRAP-type C4-dicarboxylate transport system permease small subunit insig. 26 40
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2095 TRAP-type C4-dicarboxylate transport system, small permease component no data 29 40
  Acidovorax sp. GW101-3H11 Ac3H11_3228 gluconate TRAP transporter, small permease component (from data) strong 23 58
  Burkholderia phytofirmans PsJN BPHYT_RS24180 C4-dicarboxylate ABC transporter substrate-binding protein no data 31 33
  Variovorax sp. SCN45 GFF1517 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 37 30
  Marinobacter adhaerens HP15 HP15_3027 TRAP transporter, DctQ-like membrane protein insig. 28 41
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF173 TRAP-type C4-dicarboxylate transport system, small permease component insig. 32 38
  Sinorhizobium meliloti 1021 SM_b21352 C4-dicarboxylate small membrane transport protein insig. 28 46
  Sinorhizobium meliloti 1021 SM_b20296 permease insig. 28 37
  Sinorhizobium meliloti 1021 SM_b20980 small C4-dicarboxylate uptake permease insig. 34 27
  Bosea sp. OAE506 ABIE41_RS23670 TRAP transporter small permease insig. 27 57
  Variovorax sp. SCN45 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit insig. 29 44
  Bosea sp. OAE506 ABIE41_RS24155 TRAP transporter small permease insig. 27 61
  Caulobacter crescentus NA1000 CCNA_01514 C4-dicarboxylate transport system, small permease component strong 25 72
  Caulobacter crescentus NA1000 Δfur CCNA_01514 C4-dicarboxylate transport system, small permease component cofit 25 72
  Variovorax sp. OAS795 ABID97_RS10335 TRAP transporter small permease sig. 26 55
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF796 TRAP-type C4-dicarboxylate transport system, small permease component insig. 23 49
  Castellaniella sp019104865 MT123 ABCV34_RS11530 TRAP transporter small permease insig. 21 59
  Marinobacter adhaerens HP15 HP15_4075 TRAP dicarboxylate transporter, DctQ subunit insig. 26 51
  Desulfovibrio vulgaris Miyazaki F DvMF_2136 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 28 42
  Azospirillum brasilense Sp245 AZOBR_RS31405 C4-dicarboxylate ABC transporter permease insig. 28 41
  Variovorax sp. SCN45 GFF2919 no description insig. 24 71
  Sinorhizobium meliloti 1021 SMa0249 TRAP-type small permease component insig. 23 49
  Azospirillum brasilense Sp245 AZOBR_RS30125 C4-dicarboxylate ABC transporter permease insig. 28 40
  Agrobacterium fabrum C58 Atu2742 hypothetical protein insig. 24 49
  Dinoroseobacter shibae DFL-12 Dshi_1090 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 25 53
  Rhodospirillum rubrum S1H Rru_A2238 Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) cofit 25 52
  Azospirillum sp. SherDot2 MPMX19_03905 Sialic acid TRAP transporter permease protein SiaT insig. 21 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00127 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM sig. 27 42
  Escherichia coli BL21 ECD_03429 2,3-diketo-L-gulonate TRAP transporter small permease protein insig. 27 42
  Escherichia coli ECOR27 NOLOHH_07830 yiaM 2,3-diketo-L-gulonate TRAP transporter small permease YiaM insig. 27 42
  Escherichia coli ECRC62 BNILDI_03715 yiaM 2,3-diketo-L-gulonate TRAP transporter small permease YiaM insig. 27 42
  Escherichia coli BW25113 b3577 yiaM predicted transporter (NCBI) sig. 27 42
  Acidovorax sp. GW101-3H11 Ac3H11_3521 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 26 40
  Azospirillum sp. SherDot2 MPMX19_05802 hypothetical protein cofit 23 61
  Agrobacterium fabrum C58 Atu3254 dicarboxylate ABC transporter ATPase insig. 22 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05325 TRAP-type C4-dicarboxylate transport system, small permease component no data 25 44
  Pseudomonas syringae pv. syringae B728a Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 25 52
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 25 52
  Escherichia coli Nissle 1917 ECOLIN_RS17385 TRAP transporter small permease insig. 31 36
  Castellaniella sp019104865 MT123 ABCV34_RS12275 TRAP transporter small permease insig. 28 47
  Pectobacterium carotovorum WPP14 HER17_RS19680 TRAP transporter small permease insig. 28 33
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF432 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM insig. 32 34
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2973 TRAP-type C4-dicarboxylate transport system, small permease component insig. 33 24
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1782 TRAP-type C4-dicarboxylate transport system, small permease component insig. 27 37
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2988 TRAP-type C4-dicarboxylate transport system, small permease component insig. 24 43
  Sinorhizobium meliloti 1021 SMa0155 hypothetical protein insig. 20 93
  Marinobacter adhaerens HP15 HP15_3248 tripartite ATP-independent periplasmic transporter, DctQ component insig. 27 50