Homologs of Shew_1245 from Shewanella loihica PV-4

LysR family transcriptional regulator (RefSeq)
SEED: RuBisCO operon transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1245 LysR family transcriptional regulator (RefSeq) strong 100 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1310 cmpR ndhF3 operon transcriptional regulator no data 41 94
o Acidovorax sp. GW101-3H11 Ac3H11_3174 RuBisCO operon transcriptional regulator insig. 43 92
o Dechlorosoma suillum PS Dsui_2869 transcriptional regulator strong 44 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_727 LysR family transcriptional regulator PA5437 strong 41 92
o Pseudomonas fluorescens FW300-N2E3 AO353_10035 LysR family transcriptional regulator strong 41 92
o Shewanella amazonensis SB2B Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) insig. 42 88
o Pseudomonas fluorescens SBW25 PFLU_RS29885 LysR family transcriptional regulator strong 40 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29885 LysR family transcriptional regulator strong 40 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 strong 40 92
o Pseudomonas simiae WCS417 PS417_28220 LysR family transcriptional regulator strong 40 92
o Pseudomonas sp. RS175 PFR28_04519 HTH-type transcriptional activator CmpR strong 39 92
o Pseudomonas syringae pv. syringae B728a Psyr_5062 transcriptional regulator, LysR family strong 40 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5062 transcriptional regulator, LysR family sig. 40 92
o Shewanella oneidensis MR-1 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) strong 41 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 strong 38 94
o Pseudomonas fluorescens FW300-N2C3 AO356_12015 LysR family transcriptional regulator strong 39 92
o Pseudomonas putida KT2440 PP_5348 Transcriptional regulator, LysR family strong 38 92
o Shewanella sp. ANA-3 Shewana3_0835 LysR family transcriptional regulator (RefSeq) strong 41 89
o Pseudomonas sp. S08-1 OH686_13195 Transcriptional regulator, LysR family strong 37 92
o Pseudomonas stutzeri RCH2 Psest_4086 Transcriptional regulator strong 37 92
o Variovorax sp. OAS795 ABID97_RS12840 LysR family transcriptional regulator no data 37 95
o Rhodospirillum rubrum S1H Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) strong 36 94
o Cupriavidus basilensis FW507-4G11 RR42_RS31340 transcriptional regulator insig. 35 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03013 transcriptional regulator, LysR family insig. 34 94
o Paraburkholderia graminis OAS925 ABIE53_005077 DNA-binding transcriptional LysR family regulator sig. 34 94
o Burkholderia phytofirmans PsJN BPHYT_RS29890 LysR family transcriptional regulator insig. 34 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2192 Cys regulon transcriptional activator CysB insig. 36 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS32870 LysR family transcriptional regulator insig. 36 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS20425 LysR family transcriptional regulator insig. 33 97
  Cupriavidus basilensis FW507-4G11 RR42_RS26205 LysR family transcriptional regulator insig. 36 93
  Paraburkholderia graminis OAS925 ABIE53_005522 DNA-binding transcriptional LysR family regulator strong 36 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS23600 LysR family transcriptional regulator insig. 38 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01292 transcriptional regulator, LysR family no data 35 96
o Rhodopseudomonas palustris CGA009 TX73_007990 LysR family transcriptional regulator no data 34 97
  Burkholderia phytofirmans PsJN BPHYT_RS07470 LysR family transcriptional regulator no data 38 90
  Variovorax sp. OAS795 ABID97_RS24450 LysR family transcriptional regulator insig. 34 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS34015 LysR family transcriptional regulator insig. 38 90
o Sinorhizobium meliloti 1021 SM_b20203 transcriptional regulator no data 35 94
o Azospirillum sp. SherDot2 MPMX19_02949 HTH-type transcriptional activator CmpR insig. 34 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS34110 LysR substrate-binding domain-containing protein insig. 33 89
  Pseudomonas putida KT2440 PP_3660 Transcriptional regulator, LysR family insig. 33 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05209 transcriptional regulator, LysR family strong 32 93
  Sinorhizobium meliloti 1021 SM_b21535 LysR family transcriptional regulator insig. 32 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2161 Transcriptional regulators, LysR family insig. 31 91
  Pseudomonas stutzeri RCH2 Psest_2863 Transcriptional regulator strong 32 92
  Pseudomonas putida KT2440 PP_5138 putative transcriptional regulator LysR family insig. 32 86
  Pseudomonas sp. S08-1 OH686_18820 Transcriptional regulator, LysR family insig. 31 90
  Burkholderia phytofirmans PsJN BPHYT_RS11310 LysR family transcriptional regulator insig. 31 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS07245 LysR family transcriptional regulator insig. 31 90
  Pectobacterium carotovorum WPP14 HER17_RS12840 LysR family transcriptional regulator cofit 30 91
  Pseudomonas syringae pv. syringae B728a Psyr_1386 transcriptional regulator, LysR family insig. 31 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1386 transcriptional regulator, LysR family insig. 31 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19870 LysR family transcriptional regulator insig. 28 90
o Ralstonia solanacearum UW163 UW163_RS19305 LysR family transcriptional regulator insig. 28 90
  Pseudomonas fluorescens FW300-N2E3 AO353_16845 LysR family transcriptional regulator sig. 30 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 sig. 30 90
  Dickeya dianthicola 67-19 HGI48_RS09285 LysR family transcriptional regulator insig. 29 92
  Dickeya dadantii 3937 DDA3937_RS09260 LysR family transcriptional regulator insig. 29 92
  Pseudomonas sp. S08-1 OH686_10780 Transcriptional regulator, LysR family insig. 29 90
  Paraburkholderia graminis OAS925 ABIE53_002341 DNA-binding transcriptional LysR family regulator insig. 30 93
o Herbaspirillum seropedicae SmR1 HSERO_RS13130 LysR family transcriptional regulator insig. 29 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS20480 LysR family transcriptional regulator insig. 27 90
  Pseudomonas fluorescens FW300-N2C3 AO356_05630 LysR family transcriptional regulator sig. 29 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 strong 29 90
  Dickeya dianthicola ME23 DZA65_RS09590 LysR family transcriptional regulator insig. 28 92
  Pseudomonas fluorescens FW300-N2E3 AO353_08415 LysR family transcriptional regulator insig. 31 86
  Pseudomonas sp. RS175 PFR28_00480 HTH-type transcriptional activator CmpR sig. 29 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2292 Transcriptional regulators, LysR family insig. 31 86
  Synechococcus elongatus PCC 7942 Synpcc7942_1980 rbcR transcriptional regulator, LysR family no data 31 78
  Pseudomonas putida KT2440 PP_2547 Transcriptional regulator, LysR family insig. 30 91
  Serratia liquefaciens MT49 IAI46_17215 LysR family transcriptional regulator insig. 29 91
  Acinetobacter radioresistens SK82 MPMX26_02541 HTH-type transcriptional regulator CysL strong 32 76
  Pseudomonas fluorescens GW456-L13 PfGW456L13_960 Transcriptional regulators, LysR family insig. 31 86
  Pseudomonas simiae WCS417 PS417_05850 LysR family transcriptional regulator strong 30 90
  Pseudomonas fluorescens SBW25 PFLU_RS28610 LysR family transcriptional regulator insig. 31 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28610 LysR family transcriptional regulator insig. 31 86
  Pseudomonas sp. RS175 PFR28_01936 HTH-type transcriptional activator CmpR insig. 29 86
  Pseudomonas fluorescens SBW25 PFLU_RS05920 LysR family transcriptional regulator insig. 30 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05920 LysR family transcriptional regulator sig. 30 90
  Pseudomonas simiae WCS417 PS417_26950 LysR family transcriptional regulator insig. 30 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2573 transcriptional regulator, MerR family insig. 30 90
  Rahnella sp. WP5 EX31_RS19050 LysR family transcriptional regulator insig. 28 91
o Variovorax sp. SCN45 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family insig. 26 92
  Pseudomonas putida KT2440 PP_1637 Transcriptional regulator, LysR family sig. 29 90
  Rhodanobacter denitrificans MT42 LRK55_RS12535 LysR family transcriptional regulator cofit 30 92
  Dechlorosoma suillum PS Dsui_2410 transcriptional regulator cofit 33 76
  Pseudomonas simiae WCS417 PS417_17135 LysR family transcriptional regulator insig. 30 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3777 LysR family transcriptional regulator YeiE insig. 29 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12835 LysR family transcriptional regulator insig. 30 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3961 transcriptional regulator, MerR family insig. 30 90
  Klebsiella michiganensis M5al BWI76_RS19690 LysR family transcriptional regulator insig. 29 90
o Desulfovibrio vulgaris Hildenborough JW710 DVU1331 transcriptional regulator, LysR family (TIGR) sig. 32 92
  Cupriavidus basilensis FW507-4G11 RR42_RS28250 LysR family transcriptional regulator insig. 30 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4660 LysR family transcriptional regulator PA3398 insig. 29 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS20445 LysR substrate-binding domain-containing protein insig. 28 87
  Dechlorosoma suillum PS Dsui_2257 transcriptional regulator cofit 31 90
  Escherichia coli BL21 ECD_02086 putative DNA-binding transcriptional regulator insig. 31 76
  Escherichia coli ECOR38 HEPCGN_22760 yieE DNA-binding transcriptional regulator YeiE cofit 31 76
  Escherichia coli ECRC101 OKFHMN_23495 yieE DNA-binding transcriptional regulator YeiE insig. 31 76