Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella loihica PV-4 | Shew_1245 | | LysR family transcriptional regulator (RefSeq) | strong | 100 | 100 |
o | Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 41 | 94 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_3174 | | RuBisCO operon transcriptional regulator | insig. | 43 | 92 |
o | Dechlorosoma suillum PS | Dsui_2869 | | transcriptional regulator | strong | 44 | 89 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_727 | | LysR family transcriptional regulator PA5437 | strong | 41 | 92 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_10035 | | LysR family transcriptional regulator | strong | 41 | 92 |
o | Shewanella amazonensis SB2B | Sama_0693 | | RuBisCo operon transcriptional regulator (RefSeq) | insig. | 42 | 88 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 40 | 92 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 40 | 92 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2009 | | LysR family transcriptional regulator PA5437 | strong | 40 | 92 |
o | Pseudomonas simiae WCS417 | PS417_28220 | | LysR family transcriptional regulator | strong | 40 | 92 |
o | Pseudomonas sp. RS175 | PFR28_04519 | | HTH-type transcriptional activator CmpR | strong | 39 | 92 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_5062 | | transcriptional regulator, LysR family | strong | 40 | 92 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5062 | | transcriptional regulator, LysR family | sig. | 40 | 92 |
o | Shewanella oneidensis MR-1 | SO3757 | rbcR | rubisco operon transcriptional regulator (NCBI ptt file) | strong | 41 | 89 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | strong | 38 | 94 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_12015 | | LysR family transcriptional regulator | strong | 39 | 92 |
o | Pseudomonas putida KT2440 | PP_5348 | | Transcriptional regulator, LysR family | strong | 38 | 92 |
o | Shewanella sp. ANA-3 | Shewana3_0835 | | LysR family transcriptional regulator (RefSeq) | strong | 41 | 89 |
o | Pseudomonas sp. S08-1 | OH686_13195 | | Transcriptional regulator, LysR family | strong | 37 | 92 |
o | Pseudomonas stutzeri RCH2 | Psest_4086 | | Transcriptional regulator | strong | 37 | 92 |
o | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 37 | 95 |
o | Rhodospirillum rubrum S1H | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | strong | 36 | 94 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS31340 | | transcriptional regulator | insig. | 35 | 97 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03013 | | transcriptional regulator, LysR family | insig. | 34 | 94 |
o | Paraburkholderia graminis OAS925 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | sig. | 34 | 94 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS29890 | | LysR family transcriptional regulator | insig. | 34 | 94 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2192 | | Cys regulon transcriptional activator CysB | insig. | 36 | 96 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32870 | | LysR family transcriptional regulator | insig. | 36 | 90 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS20425 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26205 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| Paraburkholderia graminis OAS925 | ABIE53_005522 | | DNA-binding transcriptional LysR family regulator | strong | 36 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS23600 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01292 | | transcriptional regulator, LysR family | no data | 35 | 96 |
o | Rhodopseudomonas palustris CGA009 | TX73_007990 | | LysR family transcriptional regulator | no data | 34 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07470 | | LysR family transcriptional regulator | no data | 38 | 90 |
| Variovorax sp. OAS795 | ABID97_RS24450 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34015 | | LysR family transcriptional regulator | insig. | 38 | 90 |
o | Sinorhizobium meliloti 1021 | SM_b20203 | | transcriptional regulator | no data | 35 | 94 |
o | Azospirillum sp. SherDot2 | MPMX19_02949 | | HTH-type transcriptional activator CmpR | insig. | 34 | 87 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34110 | | LysR substrate-binding domain-containing protein | insig. | 33 | 89 |
| Pseudomonas putida KT2440 | PP_3660 | | Transcriptional regulator, LysR family | insig. | 33 | 90 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05209 | | transcriptional regulator, LysR family | strong | 32 | 93 |
| Sinorhizobium meliloti 1021 | SM_b21535 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2161 | | Transcriptional regulators, LysR family | insig. | 31 | 91 |
| Pseudomonas stutzeri RCH2 | Psest_2863 | | Transcriptional regulator | strong | 32 | 92 |
| Pseudomonas putida KT2440 | PP_5138 | | putative transcriptional regulator LysR family | insig. | 32 | 86 |
| Pseudomonas sp. S08-1 | OH686_18820 | | Transcriptional regulator, LysR family | insig. | 31 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS11310 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS07245 | | LysR family transcriptional regulator | insig. | 31 | 90 |
| Pectobacterium carotovorum WPP14 | HER17_RS12840 | | LysR family transcriptional regulator | cofit | 30 | 91 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 31 | 90 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 31 | 90 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19870 | | LysR family transcriptional regulator | insig. | 28 | 90 |
o | Ralstonia solanacearum UW163 | UW163_RS19305 | | LysR family transcriptional regulator | insig. | 28 | 90 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16845 | | LysR family transcriptional regulator | sig. | 30 | 90 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3152 | | LysR family transcriptional regulator PA3398 | sig. | 30 | 90 |
| Dickeya dianthicola 67-19 | HGI48_RS09285 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| Dickeya dadantii 3937 | DDA3937_RS09260 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 29 | 90 |
| Paraburkholderia graminis OAS925 | ABIE53_002341 | | DNA-binding transcriptional LysR family regulator | insig. | 30 | 93 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS13130 | | LysR family transcriptional regulator | insig. | 29 | 89 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS20480 | | LysR family transcriptional regulator | insig. | 27 | 90 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05630 | | LysR family transcriptional regulator | sig. | 29 | 90 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2984 | | LysR family transcriptional regulator PA3398 | strong | 29 | 90 |
| Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_08415 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| Pseudomonas sp. RS175 | PFR28_00480 | | HTH-type transcriptional activator CmpR | sig. | 29 | 90 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2292 | | Transcriptional regulators, LysR family | insig. | 31 | 86 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1980 | rbcR | transcriptional regulator, LysR family | no data | 31 | 78 |
| Pseudomonas putida KT2440 | PP_2547 | | Transcriptional regulator, LysR family | insig. | 30 | 91 |
| Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| Acinetobacter radioresistens SK82 | MPMX26_02541 | | HTH-type transcriptional regulator CysL | strong | 32 | 76 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_960 | | Transcriptional regulators, LysR family | insig. | 31 | 86 |
| Pseudomonas simiae WCS417 | PS417_05850 | | LysR family transcriptional regulator | strong | 30 | 90 |
| Pseudomonas fluorescens SBW25 | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| Pseudomonas sp. RS175 | PFR28_01936 | | HTH-type transcriptional activator CmpR | insig. | 29 | 86 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05920 | | LysR family transcriptional regulator | insig. | 30 | 90 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05920 | | LysR family transcriptional regulator | sig. | 30 | 90 |
| Pseudomonas simiae WCS417 | PS417_26950 | | LysR family transcriptional regulator | insig. | 30 | 86 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2573 | | transcriptional regulator, MerR family | insig. | 30 | 90 |
| Rahnella sp. WP5 | EX31_RS19050 | | LysR family transcriptional regulator | insig. | 28 | 91 |
o | Variovorax sp. SCN45 | GFF1617 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 26 | 92 |
| Pseudomonas putida KT2440 | PP_1637 | | Transcriptional regulator, LysR family | sig. | 29 | 90 |
| Rhodanobacter denitrificans MT42 | LRK55_RS12535 | | LysR family transcriptional regulator | cofit | 30 | 92 |
| Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 33 | 76 |
| Pseudomonas simiae WCS417 | PS417_17135 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3777 | | LysR family transcriptional regulator YeiE | insig. | 29 | 92 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12835 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3961 | | transcriptional regulator, MerR family | insig. | 30 | 90 |
| Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 29 | 90 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU1331 | | transcriptional regulator, LysR family (TIGR) | sig. | 32 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS28250 | | LysR family transcriptional regulator | insig. | 30 | 73 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | insig. | 29 | 85 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS20445 | | LysR substrate-binding domain-containing protein | insig. | 28 | 87 |
| Dechlorosoma suillum PS | Dsui_2257 | | transcriptional regulator | cofit | 31 | 90 |
| Escherichia coli BL21 | ECD_02086 | | putative DNA-binding transcriptional regulator | insig. | 31 | 76 |
| Escherichia coli ECOR38 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | cofit | 31 | 76 |
| Escherichia coli ECRC101 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 31 | 76 |