Homologs of Shew_1149 from Shewanella loihica PV-4

LysR family transcriptional regulator (RefSeq)
SEED: LysR family transcriptional regulator YcjZ

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1149 LysR family transcriptional regulator (RefSeq) cofit 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS03280 LysR family transcriptional regulator strong 34 92
o Castellaniella sp019104865 MT123 ABCV34_RS09070 LysR family transcriptional regulator insig. 38 93
o Pseudomonas sp. DMC3 GFF1085 putative HTH-type transcriptional regulator YahB cofit 35 92
o Pseudomonas segetis P6 ACVTMO_RS02360 LysR family transcriptional regulator insig. 35 92
o Pseudomonas sp. RS175 PFR28_05088 HTH-type transcriptional regulator YhaJ insig. 37 88
o Shewanella sp. ANA-3 Shewana3_4390 LysR family transcriptional regulator (RefSeq) insig. 36 85
o Pseudomonas fluorescens FW300-N2E3 AO353_12995 LysR family transcriptional regulator strong 36 86
o Sinorhizobium meliloti 1021 SMa1782 LysR family transcriptional regulator insig. 34 82
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1450 LysR family transcriptional regulator PA4989 insig. 36 85
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3647 LysR family transcriptional regulator PA4989 strong 36 82
o Desulfovibrio vulgaris Hildenborough JW710 DVU0309 transcriptional regulator, LysR family (TIGR) insig. 35 87
o Pseudomonas fluorescens FW300-N2C3 AO356_08825 LysR family transcriptional regulator sig. 36 82
o Pseudomonas aeruginosa MRSN321 DY961_RS10745 LysR family transcriptional regulator insig. 37 82
o Pseudomonas aeruginosa PA14 IKLFDK_28590 LysR family transcriptional regulator insig. 37 82
o Pseudomonas aeruginosa PUPa3 DQ20_RS51315 LysR family transcriptional regulator insig. 37 82
o Pseudomonas simiae WCS417 PS417_02340 LysR family transcriptional regulator strong 38 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_190 LysR family transcriptional regulator PA4989 insig. 35 86
  Pseudomonas segetis P6 ACVTMO_RS20770 LysR family transcriptional regulator insig. 35 88
  Pseudomonas sp. DMC3 GFF3180 HTH-type transcriptional regulator HdfR cofit 35 85
o Pseudomonas fluorescens SBW25 PFLU_RS02415 LysR family transcriptional regulator insig. 38 85
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02415 LysR family transcriptional regulator insig. 38 85
o Pseudomonas orientalis W4I3 QF045_RS05400 LysR family transcriptional regulator cofit 38 85
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00705 HTH-type transcriptional regulator HdfR cofit 37 82
  Pseudomonas putida KT2440 PP_4929 Transcriptional regulator, LysR family insig. 37 82
o Pseudomonas sp. BP01 JOY50_RS10050 LysR family transcriptional regulator insig. 37 82
o Pseudomonas sp. SVBP6 COO64_RS17740 LysR family transcriptional regulator insig. 34 86
  Shewanella loihica PV-4 Shew_3798 LysR family transcriptional regulator (RefSeq) insig. 31 94
  Pseudomonas orientalis W4I3 QF045_RS24045 LysR family transcriptional regulator insig. 35 86
o Caulobacter crescentus NA1000 CCNA_00832 LysR-family transcriptional regulator cofit 34 86
o Caulobacter crescentus NA1000 Δfur CCNA_00832 LysR-family transcriptional regulator cofit 34 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04524 hypothetical protein insig. 34 86
  Pseudomonas aeruginosa PA14 IKLFDK_14630 LysR family transcriptional regulator sig. 33 89
  Pseudomonas putida KT2440 PP_4156 Transcriptional regulator, LysR family insig. 34 86
  Pseudomonas fluorescens SBW25 PFLU_RS23535 LysR family transcriptional regulator insig. 34 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23535 LysR family transcriptional regulator insig. 34 83
  Pseudomonas sp. BP01 JOY50_RS07140 LysR family transcriptional regulator insig. 33 86
  Pseudomonas simiae WCS417 PS417_21935 transcriptional regulator insig. 34 83
  Pseudomonas aeruginosa MRSN321 DY961_RS02595 LysR family transcriptional regulator sig. 32 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS33000 LysR family transcriptional regulator insig. 32 89
  Variovorax sp. SCN45 GFF595 Transcriptional regulator, LysR family insig. 34 81
o Enterobacter sp. TBS_079 MPMX20_03720 HTH-type transcriptional regulator HdfR strong 34 89
o Klebsiella pneumoniae MKP103 KDGMDA_04025 LysR family transcriptional regulator insig. 33 92
  Pseudomonas sp. DMC3 GFF4911 hypothetical protein cofit 34 83
o Rahnella sp. WP5 EX31_RS20055 LysR family transcriptional regulator insig. 33 89
o Variovorax sp. OAS795 ABID97_RS03460 LysR family transcriptional regulator insig. 31 91
o Erwinia amylovora T8 OLJFJH_17725 LysR family transcriptional regulator insig. 34 92
  Variovorax sp. SCN45 GFF6397 LysR family transcriptional regulator PA2758 insig. 32 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03130 HTH-type transcriptional regulator YhaJ cofit 32 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2844 LysR family transcriptional regulator PA2758 insig. 30 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1937 LysR-family transcriptional regulator STM3020 insig. 31 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3400 LysR-family transcriptional regulator STM3020 no data 32 83
  Pseudomonas fluorescens SBW25 PFLU_RS14965 LysR family transcriptional regulator insig. 32 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14965 LysR family transcriptional regulator sig. 32 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3137 Transcriptional regulator, LysR family insig. 32 86
o Pantoea sp. MT58 IAI47_14415 LysR family transcriptional regulator insig. 33 82
o Klebsiella michiganensis M5al BWI76_RS23450 LysR family transcriptional regulator strong 32 89
o Dickeya dianthicola 67-19 HGI48_RS04505 LysR family transcriptional regulator insig. 33 91
o Dickeya dianthicola ME23 DZA65_RS04425 LysR family transcriptional regulator insig. 33 91
  Pseudomonas sp. DMC3 GFF1218 putative HTH-type transcriptional regulator YahB cofit 33 86
o Dickeya dadantii 3937 DDA3937_RS04545 LysR family transcriptional regulator insig. 33 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02509 DNA-binding transcriptional regulator, LysR family insig. 32 89
o Ralstonia solanacearum PSI07 RPSI07_RS06810 LysR family transcriptional regulator cofit 31 78
  Pseudomonas fluorescens FW300-N2E3 AO353_28710 LysR family transcriptional regulator insig. 31 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3906 Transcriptional regulator insig. 33 86
o Enterobacter asburiae PDN3 EX28DRAFT_2924 Transcriptional regulator insig. 32 85
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10785 LysR family transcriptional regulator cofit 32 82
  Pseudomonas fluorescens FW300-N2E3 AO353_03195 transcriptional regulator insig. 31 83
o Sphingobium sp. HT1-2 GFF5049 Transcriptional regulator, LysR family insig. 32 86
o Rhodanobacter denitrificans MT42 LRK55_RS14075 LysR family transcriptional regulator insig. 31 89
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14355 LysR family transcriptional regulator insig. 31 89
o Azospirillum sp. SherDot2 MPMX19_06778 HTH-type transcriptional regulator YhaJ insig. 33 86
  Sinorhizobium meliloti 1021 SMa0353 LysR family transcriptional regulator insig. 33 86
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16640 LysR family transcriptional regulator insig. 31 78
o Ralstonia solanacearum UW163 UW163_RS17995 LysR family transcriptional regulator insig. 31 78
  Pseudomonas sp. SVBP6 COO64_RS25820 LysR family transcriptional regulator insig. 35 88
o Ralstonia solanacearum GMI1000 RS_RS24420 LysR family transcriptional regulator insig. 32 78
  Pseudomonas sp. SVBP6 COO64_RS08560 LysR family transcriptional regulator insig. 31 89
o Agrobacterium fabrum C58 Atu1209 transcriptional regulator, LysR family sig. 31 99
o Pectobacterium carotovorum WPP14 HER17_RS17115 LysR family transcriptional regulator insig. 32 91
  Ralstonia solanacearum PSI07 RPSI07_RS02410 LysR family transcriptional regulator insig. 32 86
  Pseudomonas sp. RS175 PFR28_01506 putative HTH-type transcriptional regulator YahB insig. 31 89
  Pseudomonas fluorescens FW300-N2E3 AO353_17780 hypothetical protein insig. 33 87
o Pseudomonas syringae pv. syringae B728a Psyr_3357 transcriptional regulator, LysR family insig. 33 81
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3357 transcriptional regulator, LysR family insig. 33 81
  Cupriavidus basilensis FW507-4G11 RR42_RS22310 LysR family transcriptional regulator insig. 32 86
o Acinetobacter baumannii LAC-4 RR41_RS11730 LysR family transcriptional regulator insig. 31 85
o Serratia liquefaciens MT49 IAI46_06790 LysR family transcriptional regulator insig. 31 85
  Pseudomonas fluorescens FW300-N2E3 AO353_28560 LysR family transcriptional regulator insig. 31 86
o Ralstonia sp. UNC404CL21Col ABZR87_RS17685 LysR family transcriptional regulator insig. 29 95
  Pseudomonas sp. BP01 JOY50_RS05995 LysR family transcriptional regulator insig. 34 81
o Burkholderia phytofirmans PsJN BPHYT_RS29085 LysR family transcriptional regulator insig. 30 89
o Acidovorax sp. GW101-3H11 Ac3H11_3277 LysR family transcriptional regulator PA2758 insig. 29 91
  Serratia liquefaciens MT49 IAI46_18235 LysR family transcriptional regulator insig. 32 82
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1331 LysR-family transcriptional regulator STM3020 insig. 31 85
o Herbaspirillum seropedicae SmR1 HSERO_RS22625 LysR family transcriptional regulator insig. 27 89
  Dickeya dadantii 3937 DDA3937_RS14890 LysR family transcriptional regulator insig. 30 88
o Rhizobium sp. OAE497 ABIE40_RS08235 LysR family transcriptional regulator insig. 31 89
  Pseudomonas putida KT2440 PP_3513 Transcriptional regulator, LysR family insig. 33 82
  Pseudomonas sp. DMC3 GFF5269 HTH-type transcriptional regulator YhaJ cofit 29 85