Homologs of SO4407 from Shewanella oneidensis MR-1

GGDEF family protein (NCBI ptt file)
SEED: Response regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4407 GGDEF family protein (NCBI ptt file) insig. 100 100
o Dechlorosoma suillum PS Dsui_0789 diguanylate cyclase (GGDEF) domain-containing protein insig. 61 98
o Acidovorax sp. GW101-3H11 Ac3H11_2509 Response regulator insig. 57 98
  Herbaspirillum seropedicae SmR1 HSERO_RS23570 diguanylate cyclase insig. 50 55
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 48 56
  Herbaspirillum seropedicae SmR1 HSERO_RS03660 diguanylate cyclase insig. 49 56
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 48 53
  Rahnella sp. WP5 EX31_RS24850 diguanylate cyclase insig. 46 52
  Pseudomonas syringae pv. syringae B728a Psyr_3328 GGDEF domain protein insig. 45 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3328 GGDEF domain protein insig. 45 57
  Dechlorosoma suillum PS Dsui_2486 diguanylate cyclase (GGDEF) domain-containing protein cofit 43 61
  Pseudomonas sp. S08-1 OH686_11240 hypothetical protein insig. 48 52
  Synechococcus elongatus PCC 7942 Synpcc7942_2096 diguanylate cyclase with GAF sensor insig. 49 52
  Ralstonia solanacearum PSI07 RPSI07_RS01600 GGDEF domain-containing protein insig. 45 54
  Herbaspirillum seropedicae SmR1 HSERO_RS15135 diguanylate cyclase sig. 46 51
  Pseudomonas syringae pv. syringae B728a Psyr_2939 response regulator receiver modulated diguanylate cyclase no data 46 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2939 response regulator receiver modulated diguanylate cyclase no data 46 54
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02129 diguanylate cyclase (GGDEF) domain-containing protein insig. 45 52
  Paraburkholderia sabiae LMG 24235 QEN71_RS18215 sensor domain-containing diguanylate cyclase insig. 44 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1617 COG2199: FOG: GGDEF domain insig. 45 54
  Ralstonia solanacearum GMI1000 RS_RS19085 GGDEF domain-containing protein insig. 47 51
  Pseudomonas sp. RS175 PFR28_02342 hypothetical protein insig. 45 54
  Ralstonia solanacearum UW163 UW163_RS17650 GGDEF domain-containing protein insig. 47 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS28550 diguanylate cyclase insig. 48 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3831 FOG: PAS/PAC domain insig. 42 58
  Pseudomonas syringae pv. syringae B728a Psyr_2281 GGDEF domain protein insig. 46 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2281 GGDEF domain protein insig. 46 51
  Pseudomonas fluorescens FW300-N2E3 AO353_28530 diguanylate cyclase insig. 45 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 51
  Pseudomonas sp. S08-1 OH686_21185 PAS/PAC domain insig. 46 50
  Dechlorosoma suillum PS Dsui_1430 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 69
  Ralstonia solanacearum PSI07 RPSI07_RS07710 diguanylate cyclase response regulator insig. 43 56
  Burkholderia phytofirmans PsJN BPHYT_RS01980 diguanylate cyclase insig. 46 50
  Magnetospirillum magneticum AMB-1 AMB_RS16470 GGDEF domain-containing protein insig. 44 52
  Synechococcus elongatus PCC 7942 Synpcc7942_2534 diguanylate cyclase with GAF sensor insig. 47 50
  Azospirillum brasilense Sp245 AZOBR_RS03050 diguanylate cyclase sig. 46 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3039 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 44 51
  Rhodanobacter denitrificans MT42 LRK55_RS00270 sensor domain-containing diguanylate cyclase cofit 46 51
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00530 sensor domain-containing diguanylate cyclase insig. 46 51
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02648 diguanylate cyclase (GGDEF) domain-containing protein insig. 46 50
  Pseudomonas simiae WCS417 PS417_11975 diguanylate cyclase insig. 41 58
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 45 55
  Vibrio cholerae E7946 ATCC 55056 CSW01_12010 GGDEF domain-containing protein insig. 45 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5815 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 50
  Paraburkholderia graminis OAS925 ABIE53_000542 diguanylate cyclase (GGDEF)-like protein insig. 43 51
  Marinobacter adhaerens HP15 HP15_4072 diguanylate cyclase with PAS/PAC sensor insig. 49 48
  Desulfovibrio vulgaris Hildenborough JW710 DVU3106 GGDEF domain protein (TIGR) sig. 42 59
  Burkholderia phytofirmans PsJN BPHYT_RS29040 diguanylate cyclase strong 46 51
  Magnetospirillum magneticum AMB-1 AMB_RS24650 GGDEF domain-containing protein cofit 48 49
  Pseudomonas putida KT2440 PP_1494 Response regulator/GGDEF domain protein strong 44 51
  Pseudomonas fluorescens FW300-N2C3 AO356_25285 diguanylate cyclase insig. 44 52
  Ralstonia sp. UNC404CL21Col ABZR87_RS23355 diguanylate cyclase strong 43 50
  Pseudomonas fluorescens FW300-N2E3 AO353_04215 diguanylate cyclase insig. 42 51
  Rhodospirillum rubrum S1H Rru_A0102 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 40 57
  Burkholderia phytofirmans PsJN BPHYT_RS25280 diguanylate cyclase insig. 47 49
  Paraburkholderia sabiae LMG 24235 QEN71_RS31465 diguanylate cyclase insig. 43 54
  Variovorax sp. OAS795 ABID97_RS28160 sensor domain-containing diguanylate cyclase insig. 46 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS10075 diguanylate cyclase insig. 44 51
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 41 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN insig. 44 52
  Acidovorax sp. GW101-3H11 Ac3H11_1639 Probable two-component response regulator cofit 48 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3970 Two-component response regulator insig. 44 51
  Magnetospirillum magneticum AMB-1 AMB_RS18715 GGDEF domain-containing protein insig. 45 50
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 44 51
  Pseudomonas fluorescens FW300-N2C3 AO356_23360 diguanylate cyclase insig. 44 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 46 52
  Ralstonia solanacearum PSI07 RPSI07_RS07115 GGDEF domain-containing protein insig. 44 50
  Acidovorax sp. GW101-3H11 Ac3H11_3597 hypothetical protein insig. 42 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16595 sensor domain-containing diguanylate cyclase insig. 44 50
  Ralstonia solanacearum UW163 UW163_RS17950 sensor domain-containing diguanylate cyclase insig. 44 50
  Shewanella sp. ANA-3 Shewana3_1212 diguanylate cyclase (RefSeq) insig. 42 56
  Burkholderia phytofirmans PsJN BPHYT_RS19780 diguanylate cyclase insig. 41 51
  Pseudomonas fluorescens SBW25 PFLU_RS12735 diguanylate cyclase insig. 40 58
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12735 diguanylate cyclase insig. 40 58
  Ralstonia solanacearum GMI1000 RS_RS19075 sensor domain-containing diguanylate cyclase insig. 44 51
  Rhizobium sp. OAE497 ABIE40_RS04125 diguanylate cyclase insig. 43 51
  Pseudomonas fluorescens FW300-N2C3 AO356_01855 diguanylate cyclase insig. 44 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3834 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 50
  Herbaspirillum seropedicae SmR1 HSERO_RS07715 diguanylate cyclase insig. 46 54
  Variovorax sp. SCN45 GFF4645 GGDEF domain protein insig. 47 54
  Pseudomonas fluorescens FW300-N2E3 AO353_20465 diguanylate cyclase cofit 43 52
  Pseudomonas syringae pv. syringae B728a Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 43 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 43 51
  Ralstonia solanacearum PSI07 RPSI07_RS01585 GGDEF domain-containing protein insig. 43 49
  Pseudomonas fluorescens FW300-N2C3 AO356_06245 diguanylate cyclase insig. 42 51
  Serratia liquefaciens MT49 IAI46_16330 diguanylate cyclase insig. 44 51
  Acidovorax sp. GW101-3H11 Ac3H11_1559 Response regulator strong 43 51
  Rhodopseudomonas palustris CGA009 TX73_019845 diguanylate cyclase insig. 42 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3117 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 42 51
  Shewanella amazonensis SB2B Sama_2376 GGDEF family protein (RefSeq) insig. 40 63
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 40 58
  Cupriavidus basilensis FW507-4G11 RR42_RS34850 diguanylate cyclase insig. 40 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2239 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 50
  Ralstonia solanacearum GMI1000 RS_RS24470 GGDEF domain-containing protein insig. 43 50
  Magnetospirillum magneticum AMB-1 AMB_RS24720 GGDEF domain-containing protein cofit 38 63
  Rhodopseudomonas palustris CGA009 TX73_001490 diguanylate cyclase insig. 45 51
  Cupriavidus basilensis FW507-4G11 RR42_RS09990 DeoR family transcriptional regulator insig. 48 50
  Pseudomonas sp. RS175 PFR28_00357 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 42 51
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4751 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 42 51
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 44 49