Homologs of SO2039 from Shewanella oneidensis MR-1

conserved domain protein (NCBI ptt file)
SEED: EAL domain

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2039 conserved domain protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_2237 diguanylate phosphodiesterase (RefSeq) insig. 88 100
o Shewanella amazonensis SB2B Sama_1896 putative diguanylate phosphodiesterase (RefSeq) strong 50 94
o Dechlorosoma suillum PS Dsui_1674 EAL domain-containing protein cofit 39 93
  Pseudomonas sp. DMC3 GFF2583 hypothetical protein cofit 32 92
  Pseudomonas orientalis W4I3 QF045_RS11965 bifunctional diguanylate cyclase/phosphodiesterase cofit 29 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02030 hypothetical protein cofit 31 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 94
  Pseudomonas fluorescens FW300-N2C3 AO356_19330 diguanylate phosphodiesterase insig. 28 94
  Pseudomonas sp. RS175 PFR28_03170 hypothetical protein insig. 28 94
  Pseudomonas fluorescens SBW25 PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 28 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 28 97
  Pseudomonas simiae WCS417 PS417_09320 diguanylate phosphodiesterase insig. 29 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS00935 EAL domain-containing protein insig. 32 91
  Pseudomonas sp. S08-1 OH686_19705 hypothetical protein insig. 30 94
  Pseudomonas fluorescens FW300-N2E3 AO353_02445 diguanylate phosphodiesterase insig. 31 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 96
  Pseudomonas aeruginosa MRSN321 DY961_RS00625 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS40410 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 90
  Pseudomonas aeruginosa PA14 IKLFDK_16660 diguanylate phosphodiesterase insig. 28 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_248 EAL-domain protein insig. 31 92
  Pseudomonas sp. SVBP6 COO64_RS06985 bifunctional diguanylate cyclase/phosphodiesterase insig. 29 94
  Shewanella amazonensis SB2B Sama_0496 putative diguanylate phosphodiesterase (RefSeq) insig. 29 88
  Pseudomonas putida KT2440 PP_1718 putative diguanylate phosphodiesterase containing EAL domain insig. 28 94
  Pseudomonas sp. DMC3 GFF4585 putative EAL-domain containing protein YkuI cofit 31 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 92
  Agrobacterium fabrum C58 Atu3207 diguanylate cyclase insig. 29 96
  Acinetobacter baumannii LAC-4 RR41_RS05715 EAL domain-containing protein insig. 28 88
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 30 88
  Methylophilus sp. DMC18 GFF393 hypothetical protein cofit 29 89
  Pseudomonas simiae WCS417 PS417_08615 diguanylate phosphodiesterase insig. 30 94
  Burkholderia phytofirmans PsJN BPHYT_RS02005 diguanylate phosphodiesterase insig. 32 91
  Enterobacter sp. TBS_079 MPMX20_01206 hypothetical protein strong 31 89
  Rhodospirillum rubrum S1H Rru_A1659 Putative diguanylate phosphodiesterase (EAL domain) (NCBI) insig. 31 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 31 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06460 diguanylate phosphodiesterase insig. 30 94
  Paraburkholderia graminis OAS925 ABIE53_003996 diguanylate cyclase (GGDEF)-like protein sig. 27 90
  Paraburkholderia graminis OAS925 ABIE53_000547 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) sig. 32 91
  Enterobacter asburiae PDN3 EX28DRAFT_2619 diguanylate cyclase (GGDEF) domain strong 28 89
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 32 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01855 putative EAL-domain containing protein YkuI cofit 30 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08140 EAL domain-containing protein cofit 28 88
  Rhizobium sp. OAE497 ABIE40_RS04540 EAL domain-containing protein insig. 30 97
  Klebsiella pneumoniae MKP103 KDGMDA_21820 GGDEF domain-containing protein insig. 30 90
  Bosea sp. OAE506 ABIE41_RS17985 EAL domain-containing protein no data 28 89
  Methylophilus sp. DMC18 GFF1905 hypothetical protein insig. 29 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02124 EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 31 91
  Shewanella sp. ANA-3 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 27 94
  Klebsiella michiganensis M5al BWI76_RS19775 phage resistance protein strong 29 95
  Pseudomonas fluorescens SBW25 PFLU_RS08570 EAL domain-containing protein insig. 31 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08570 EAL domain-containing protein sig. 31 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3621 FOG: EAL domain sig. 30 90
  Pseudomonas stutzeri RCH2 Psest_1188 FOG: EAL domain insig. 30 91
  Enterobacter sp. TBS_079 MPMX20_03142 putative cyclic di-GMP phosphodiesterase PdeN insig. 28 91
  Shewanella oneidensis MR-1 SO0555 conserved hypothetical protein (NCBI ptt file) insig. 27 94
  Shewanella loihica PV-4 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 25 93
  Synechococcus elongatus PCC 7942 Synpcc7942_0122 EAL insig. 27 94
  Pseudomonas fluorescens FW300-N2E3 AO353_16180 diguanylate cyclase strong 31 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3422 diguanylate cyclase (GGDEF) domain insig. 30 90
  Klebsiella pneumoniae MKP103 KDGMDA_25960 GGDEF-domain containing protein insig. 29 91
  Desulfovibrio vulgaris Miyazaki F DvMF_1754 diguanylate phosphodiesterase (RefSeq) insig. 28 88
  Acidovorax sp. GW101-3H11 Ac3H11_3554 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 92
  Shewanella amazonensis SB2B Sama_3153 putative diguanylate phosphodiesterase (RefSeq) insig. 28 94
  Shewanella loihica PV-4 Shew_3329 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 28 90
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 27 91
  Agrobacterium fabrum C58 Atu0826 hypothetical protein insig. 30 98
  Pseudomonas segetis P6 MPMX49_01744 hypothetical protein insig. 27 92
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 29 89
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 28 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01352 diguanylate cyclase/phosphodiesterase insig. 26 93
  Azospirillum brasilense Sp245 AZOBR_RS21835 diguanylate cyclase strong 30 88
  Pseudomonas syringae pv. syringae B728a Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 25 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 25 94
  Rahnella sp. WP5 EX31_RS07415 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 89
  Escherichia coli ECRC100 OKFHMN_23395 pdeN cyclic di-GMP phosphodiesterase cofit 29 91
  Escherichia coli ECRC101 MCAODC_14445 pdeN cyclic di-GMP phosphodiesterase insig. 29 91
  Escherichia coli ECRC102 NIAGMN_21160 pdeN cyclic di-GMP phosphodiesterase cofit 29 91
  Escherichia coli ECRC98 JDDGAC_27355 pdeN cyclic di-GMP phosphodiesterase insig. 29 91
  Escherichia coli ECRC99 KEDOAH_04790 pdeN cyclic di-GMP phosphodiesterase no data 29 91
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 29 91
  Rhizobium sp. OAE497 ABIE40_RS25280 GGDEF domain-containing phosphodiesterase cofit 29 91
  Dechlorosoma suillum PS Dsui_2890 diguanylate cyclase (GGDEF) domain-containing protein cofit 34 67
  Methylophilus sp. DMC18 GFF2416 hypothetical protein insig. 29 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00470 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 97
  Pantoea sp. MT58 IAI47_06620 cyclic di-GMP phosphodiesterase insig. 28 95
  Erwinia amylovora T8 OLJFJH_04460 cyclic diguanylate phosphodiesterase insig. 25 96
  Methylophilus sp. DMC18 GFF394 hypothetical protein insig. 29 89
  Escherichia coli ECOR27 NOLOHH_14970 pdeN cyclic di-GMP phosphodiesterase sig. 29 91
  Escherichia coli ECRC62 BNILDI_13890 pdeN cyclic di-GMP phosphodiesterase insig. 29 91
  Escherichia coli BL21 ECD_02106 resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase cofit 29 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01533 putative cyclic di-GMP phosphodiesterase PdeN insig. 29 91
  Escherichia coli BW25113 b2176 rtn hypothetical protein (NCBI) insig. 29 91
  Dechlorosoma suillum PS Dsui_2123 EAL domain-containing protein cofit 25 97
  Acidovorax sp. GW101-3H11 Ac3H11_2370 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 49
  Marinobacter adhaerens HP15 HP15_3671 sensory box/GGDEF family protein sig. 30 91
  Escherichia coli ECOR38 HEPCGN_22660 pdeN cyclic di-GMP phosphodiesterase insig. 29 91
  Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 28 81
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 28 93
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein insig. 28 95
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 27 90