Homologs of SO0437 from Shewanella oneidensis MR-1

sensory box protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 84 100
o Shewanella loihica PV-4 Shew_3416 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 56 99
o Shewanella amazonensis SB2B Sama_0388 putative diguanylate phosphodiesterase (RefSeq) strong 49 99
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 63
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 65
  Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 37 66
  Pseudomonas syringae pv. syringae B728a Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) cofit 37 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 63
  Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 36 63
  Pseudomonas sp. RS175 PFR28_00896 hypothetical protein insig. 36 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2530 Sensory box/GGDEF family protein strong 36 66
  Pseudomonas fluorescens FW300-N2C3 AO356_03515 hypothetical protein cofit 36 66
  Pseudomonas fluorescens FW300-N2E3 AO353_02120 hypothetical protein strong 37 64
  Pseudomonas simiae WCS417 PS417_19145 membrane protein strong 38 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2166 Sensory box/GGDEF family protein insig. 36 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_361 Sensory box/GGDEF family protein insig. 37 63
  Pseudomonas fluorescens SBW25 PFLU_RS21140 EAL domain-containing protein cofit 37 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21140 EAL domain-containing protein strong 37 64
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 35 64
  Alteromonas macleodii MIT1002 MIT1002_00145 Cyclic di-GMP phosphodiesterase Gmr cofit 39 52
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 34 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_00390 GGDEF domain-containing protein insig. 38 51
  Shewanella amazonensis SB2B Sama_2973 GGDEF domain-containing protein (RefSeq) insig. 34 65
  Shewanella oneidensis MR-1 SO0628 GGDEF domain protein (NCBI ptt file) insig. 37 51
  Shewanella sp. ANA-3 Shewana3_0620 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 36 51
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 33 64
  Rhodanobacter denitrificans MT42 LRK55_RS09660 EAL domain-containing protein cofit 36 50
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10020 EAL domain-containing protein insig. 36 50
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 38 50
  Rhodanobacter sp. FW510-T8 OKGIIK_16275 Diguanylate cyclase insig. 36 50
  Dechlorosoma suillum PS Dsui_2894 diguanylate cyclase (GGDEF) domain-containing protein cofit 37 50
  Acidovorax sp. GW101-3H11 Ac3H11_903 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 63
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 31 63
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 35 48
  Acidovorax sp. GW101-3H11 Ac3H11_2498 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 34 51
  Dechlorosoma suillum PS Dsui_0760 diguanylate cyclase (GGDEF) domain-containing protein cofit 31 66
  Rhodospirillum rubrum S1H Rru_A2763 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 30 65
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 30 65
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 29 63
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 29 68
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 33 52
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 33 52
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 29 64
  Marinobacter adhaerens HP15 HP15_862 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain insig. 34 49
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 31 62
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 30 61
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 33 54
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 35 53
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 51
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 27 64
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 28 69
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 32 53
  Dickeya dianthicola ME23 DZA65_RS11845 EAL domain-containing protein cofit 31 63
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 30 67
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 30 63
  Alteromonas macleodii MIT1002 MIT1002_00062 Bacteriophytochrome cph2 insig. 34 49
  Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 30 64
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 28 71
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 32 52
  Dickeya dianthicola 67-19 HGI48_RS11510 EAL domain-containing protein cofit 31 63
  Dickeya dadantii 3937 DDA3937_RS11465 EAL domain-containing protein strong 31 63
  Pantoea sp. MT58 IAI47_14995 EAL domain-containing protein insig. 28 66
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 28 75
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 28 69
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 31 53
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 30 53
  Bosea sp. OAE506 ABIE41_RS10320 EAL domain-containing protein insig. 32 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 31 53
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein cofit 30 63
  Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 30 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 30 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1716 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) strong 29 62
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 29 64
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 28 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 31 53
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 31 53
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 29 65
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 67
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 31 53
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 29 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 29 62
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 34 50
  Desulfovibrio vulgaris Hildenborough JW710 DVU1190 sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 29 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 31 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3221 Sensory box/GGDEF family protein insig. 33 55
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 31 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 31 53
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 29 61
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 28 63
  Ralstonia solanacearum PSI07 RPSI07_RS15375 GGDEF-domain containing protein insig. 32 55
  Ralstonia solanacearum GMI1000 RS_RS07755 GGDEF-domain containing protein insig. 32 55
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 33 51
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 29 62
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 28 72
  Pseudomonas syringae pv. syringae B728a Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 33 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 33 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4602 Sensory box/GGDEF family protein insig. 34 50
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 30 62