Homologs of sbcD from Escherichia coli BW25113

sbcD: exonuclease, dsDNA, ATP-dependent (NCBI)
SEED: Exonuclease SbcD
KEGG: exonuclease SbcD

67 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Escherichia coli BL21 ECD_00346 exonuclease, dsDNA, ATP-dependent insig. 100 100
o Escherichia coli ECRC101 OKFHMN_08550 sbcD exonuclease subunit SbcD insig. 100 100
o Escherichia coli ECRC101 MCAODC_27775 sbcD exonuclease subunit SbcD insig. 100 100
o Escherichia coli ECRC102 NIAGMN_06605 sbcD exonuclease subunit SbcD sig. 100 100
o Escherichia coli ECRC62 BNILDI_22895 sbcD exonuclease subunit SbcD insig. 100 100
o Escherichia coli ECRC98 JDDGAC_12205 sbcD exonuclease subunit SbcD no data 100 100
o Escherichia coli ECRC99 KEDOAH_19415 sbcD exonuclease subunit SbcD no data 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03278 Nuclease SbcCD subunit D insig. 100 100
  Escherichia coli BW25113 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) sig. 100 100
o Escherichia coli ECOR27 NOLOHH_01480 sbcD exonuclease subunit SbcD cofit 100 100
o Escherichia fergusonii Becca EFB2_03659 Nuclease SbcCD subunit D insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS02405 exonuclease subunit SbcD insig. 99 100
o Escherichia coli ECOR38 HEPCGN_07190 sbcD exonuclease subunit SbcD cofit 99 100
o Enterobacter asburiae PDN3 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) cofit 82 100
o Enterobacter sp. TBS_079 MPMX20_00985 Nuclease SbcCD subunit D insig. 81 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4294 Exonuclease SbcD insig. 84 100
o Klebsiella michiganensis M5al BWI76_RS06225 exonuclease sbcCD subunit D insig. 78 99
o Serratia liquefaciens MT49 IAI46_04770 exonuclease subunit SbcD insig. 63 97
o Rahnella sp. WP5 EX31_RS22035 exonuclease subunit SbcD insig. 62 100
o Erwinia tracheiphila SCR3 LU632_RS18930 sbcD exonuclease subunit SbcD insig. 63 100
o Pectobacterium carotovorum WPP14 HER17_RS16045 exonuclease subunit SbcD cofit 59 100
o Dickeya dianthicola ME23 DZA65_RS05805 exonuclease subunit SbcD insig. 60 99
o Dickeya dianthicola 67-19 HGI48_RS05480 exonuclease subunit SbcD insig. 60 99
o Dickeya dadantii 3937 DDA3937_RS05420 exonuclease subunit SbcD strong 60 99
o Pantoea sp. MT58 IAI47_14860 exonuclease subunit SbcD insig. 62 99
o Alteromonas macleodii MIT1002 MIT1002_00897 Nuclease SbcCD subunit D insig. 46 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11095 exonuclease sbcCD subunit D insig. 36 81
o Azospirillum sp. SherDot2 MPMX19_04315 Nuclease SbcCD subunit D insig. 35 92
o Pseudomonas stutzeri RCH2 Psest_3539 exonuclease SbcD sig. 31 100
o Pseudomonas simiae WCS417 PS417_15115 exonuclease SbcD strong 33 92
o Pseudomonas putida KT2440 PP_2025 Exonuclease SbcD sig. 34 92
o Pseudomonas fluorescens SBW25 PFLU_RS17135 exonuclease subunit SbcD insig. 33 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17135 exonuclease subunit SbcD insig. 33 92
o Pseudomonas sp. RS175 PFR28_01589 Nuclease SbcCD subunit D insig. 33 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4633 Exonuclease SbcD no data 33 92
o Pseudomonas syringae pv. syringae B728a Psyr_1715 Exodeoxyribonuclease I subunit D insig. 32 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1715 Exodeoxyribonuclease I subunit D insig. 32 100
o Pseudomonas fluorescens FW300-N2C3 AO356_24630 exonuclease SbcD insig. 31 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_619 Exonuclease SbcD insig. 32 92
o Pseudomonas fluorescens FW300-N2E3 AO353_23680 exonuclease SbcD insig. 32 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09930 exonuclease SbcCD subunit D insig. 34 72
o Azospirillum brasilense Sp245 AZOBR_RS18495 metallophosphatase insig. 38 69
  Bacteroides ovatus ATCC 8483 BACOVA_00394 exonuclease SbcCD, D subunit insig. 33 79
o Bacteroides thetaiotaomicron VPI-5482 BT0244 putative exonuclease (NCBI ptt file) insig. 32 87
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3307 Exonuclease SbcD strong 31 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08350 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 34 65
  Phocaeicola dorei CL03T12C01 ABI39_RS02545 exonuclease SbcCD subunit D insig. 32 65
o Acinetobacter radioresistens SK82 MPMX26_02402 Nuclease SbcCD subunit D insig. 32 98
o Shewanella amazonensis SB2B Sama_1267 exonuclease SbcD, putative (RefSeq) sig. 30 99
  Shewanella loihica PV-4 Shew_2457 nuclease SbcCD, D subunit (RefSeq) sig. 31 73
  Shewanella oneidensis MR-1 SO2844 exonuclease SbcD, putative (NCBI ptt file) sig. 30 74
  Shewanella sp. ANA-3 Shewana3_2612 exodeoxyribonuclease I subunit D (RefSeq) insig. 29 72
o Cupriavidus basilensis FW507-4G11 RR42_RS35935 exonuclease SbcD insig. 26 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_16840 exonuclease sbcCD subunit D insig. 30 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1707 exonuclease SbcD insig. 26 65
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02868 DNA repair exonuclease SbcCD nuclease subunit insig. 39 23
  Paraburkholderia graminis OAS925 ABIE53_005927 DNA repair exonuclease SbcCD nuclease subunit insig. 38 23
  Variovorax sp. OAS795 ABID97_RS26675 DNA repair exonuclease insig. 28 69
  Variovorax sp. SCN45 GFF48 DNA double-strand break repair protein Mre11 insig. 26 67
  Bosea sp. OAE506 ABIE41_RS16745 metallophosphoesterase insig. 26 65
  Burkholderia phytofirmans PsJN BPHYT_RS26720 metallophosphatase insig. 36 23
  Castellaniella sp019104865 MT123 ABCV34_RS05525 DNA repair exonuclease insig. 37 23
  Marinobacter adhaerens HP15 HP15_1575 metallophosphoesterase cofit 35 23
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00180 DNA repair exonuclease cofit 33 22
  Paraburkholderia sabiae LMG 24235 QEN71_RS10995 DNA repair exonuclease insig. 35 23
  Fusobacterium nucleatum SB010 HUW76_07460 exonuclease SbcCD subunit D cofit 28 23
  Phaeobacter inhibens DSM 17395 PGA1_c28290 phosphoesterase-like protein strong 33 22