Conservation of cofitness between Xcc-8004.2886.1 and Xcc-8004.3370.1 in Xanthomonas campestris pv. campestris strain 8004

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2886.1 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 1.0 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R 0.30 14
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS10115 chemotaxis protein CheR 0.35 HSERO_RS09290 ribonuclease R low > 78
Dechlorosoma suillum PS 0.54 Dsui_1711 methylase of chemotaxis methyl-accepting protein 0.40 Dsui_3128 ribonuclease R low > 51
Lysobacter sp. OAE881 0.54 ABIE51_RS16950 CheR family methyltransferase 0.66 ABIE51_RS07475 ribonuclease R low > 62
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS17405 chemotaxis protein CheR 0.38 RALBFv3_RS15345 ribonuclease R low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS21745 chemotaxis protein CheR 0.38 UW163_RS12810 ribonuclease R — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS17980 CheR family methyltransferase 0.38 ABZR87_RS10985 ribonuclease R low > 80
Ralstonia solanacearum GMI1000 0.49 RS_RS23905 chemotaxis protein CheR 0.39 RS_RS06155 ribonuclease R low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS06240 chemotaxis protein CheR 0.38 RPSI07_RS18030 ribonuclease R low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF1665 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.40 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Rahnella sp. WP5 0.46 EX31_RS11365 protein-glutamate O-methyltransferase CheR 0.39 EX31_RS08785 ribonuclease R low > 89
Enterobacter asburiae PDN3 0.45 EX28DRAFT_0672 Methylase of chemotaxis methyl-accepting proteins 0.39 EX28DRAFT_3376 ribonuclease R low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_02788 Chemotaxis protein methyltransferase 0.39 MPMX20_00460 Ribonuclease R low > 85
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS18980 chemotaxis protein CheR 0.36 BPHYT_RS08455 ribonuclease R low > 109
Escherichia coli ECRC101 0.44 MCAODC_19260 cheR protein-glutamate O-methyltransferase CheR 0.40 MCAODC_02735 rnr ribonuclease R low > 87
Escherichia coli ECOR38 0.44 HEPCGN_04565 cheR protein-glutamate O-methyltransferase CheR 0.39 HEPCGN_10450 rnr ribonuclease R low > 87
Escherichia coli ECRC100 0.44 OKFHMN_26145 cheR protein-glutamate O-methyltransferase CheR 0.40 OKFHMN_12220 rnr ribonuclease R low > 80
Escherichia fergusonii Becca 0.44 EFB2_02059 Chemotaxis protein methyltransferase 0.39 EFB2_04356 Ribonuclease R low > 86
Escherichia coli ECRC102 0.44 NIAGMN_01915 cheR protein-glutamate O-methyltransferase CheR 0.40 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC98 0.44 JDDGAC_00720 cheR protein-glutamate O-methyltransferase CheR 0.40 JDDGAC_15860 rnr ribonuclease R low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS10760 protein-glutamate O-methyltransferase CheR 0.40 ECOLIN_RS24265 ribonuclease R — —
Escherichia coli ECRC99 0.44 KEDOAH_01960 cheR protein-glutamate O-methyltransferase CheR 0.40 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli ECOR27 0.44 NOLOHH_16585 cheR protein-glutamate O-methyltransferase CheR 0.39 NOLOHH_04485 rnr ribonuclease R low > 75
Escherichia coli ECRC62 0.44 BNILDI_15375 cheR protein-glutamate O-methyltransferase CheR 0.39 BNILDI_07005 rnr ribonuclease R low > 75
Escherichia coli BW25113 0.44 b1884 cheR chemotaxis regulator, protein-glutamate methyltransferase (NCBI) 0.40 b4179 vacB putative enzyme (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01844 Chemotaxis protein methyltransferase 0.39 OHPLBJKB_03863 Ribonuclease R low > 73
Escherichia coli BL21 0.44 ECD_01855 chemotaxis regulator, protein-glutamate methyltransferase 0.40 ECD_04046 exoribonuclease R, RNase R — —
Pantoea sp. MT58 0.43 IAI47_08325 protein-glutamate O-methyltransferase CheR 0.40 IAI47_02625 ribonuclease R low > 76
Erwinia tracheiphila SCR3 0.43 LU632_RS13530 cheR protein-glutamate O-methyltransferase CheR 0.39 LU632_RS21750 rnr ribonuclease R low > 74
Shewanella sp. ANA-3 0.42 Shewana3_2215 MCP methyltransferase, CheR-type (RefSeq) 0.36 Shewana3_0697 RNAse R (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05745 MCP methyltransferase, CheR-type 0.36 H281DRAFT_00712 RNAse R low > 103
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS28995 CheR family methyltransferase 0.36 QEN71_RS22925 ribonuclease R low > 153
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS35795 chemotaxis protein CheR 0.38 RR42_RS13065 ribonuclease R low > 128
Paraburkholderia graminis OAS925 0.42 ABIE53_000121 chemotaxis protein methyltransferase CheR 0.36 ABIE53_001940 ribonuclease R low > 113
Shewanella oneidensis MR-1 0.41 SO2124 cheR-1 chemotaxis protein methyltransferase CheR (NCBI ptt file) 0.36 SO3935 vacB ribonuclease R (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS08115 protein-glutamate O-methyltransferase CheR 0.38 HER17_RS03835 ribonuclease R low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS13575 protein-glutamate O-methyltransferase CheR 0.37 HGI48_RS17315 ribonuclease R low > 71
Dickeya dianthicola ME23 0.41 DZA65_RS14060 protein-glutamate O-methyltransferase CheR 0.37 DZA65_RS18405 ribonuclease R low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS13530 protein-glutamate O-methyltransferase CheR 0.38 DDA3937_RS17260 ribonuclease R low > 74
Serratia liquefaciens MT49 0.39 IAI46_16020 protein-glutamate O-methyltransferase CheR 0.38 IAI46_01660 ribonuclease R low > 86
Castellaniella sp019104865 MT123 0.38 ABCV34_RS05820 CheR family methyltransferase 0.33 ABCV34_RS06625 ribonuclease R low > 48
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00444 chemotaxis protein methyltransferase 0.21 CCNA_02537 ribonuclease R low > 67
Caulobacter crescentus NA1000 0.37 CCNA_00444 chemotaxis protein methyltransferase 0.21 CCNA_02537 ribonuclease R low > 66
Shewanella loihica PV-4 0.34 Shew_0110 MCP methyltransferase, CheR-type (RefSeq) 0.37 Shew_3289 ribonuclease R (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.34 LRK55_RS13400 protein-glutamate O-methyltransferase 0.52 LRK55_RS00235 ribonuclease R low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS13660 protein-glutamate O-methyltransferase 0.52 LRK54_RS00495 ribonuclease R low > 59
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_19530 Chemotaxis protein methyltransferase 3 0.38 CSW01_13155 ribonuclease R low > 62
Shewanella amazonensis SB2B 0.32 Sama_3498 protein-glutamate O-methyltransferase (RefSeq) 0.36 Sama_3067 exoribonuclease II (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS22215 protein-glutamate O-methyltransferase CheR 0.50 ABZR86_RS08270 ribonuclease R low > 74
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_1083 Methylase of chemotaxis methyl-accepting proteins 0.20 Ga0059261_3266 ribonuclease R low > 68
Rhodospirillum rubrum S1H 0.30 Rru_A1405 MCP methyltransferase, CheR-type (NCBI) 0.23 Rru_A3203 ribonuclease R (NCBI) low > 58
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_02905 Chemotaxis protein methyltransferase 0.51 OKGIIK_06755 rnr ribonuclease R low > 52
Agrobacterium fabrum C58 0.29 Atu0518 chemotaxis methyltransferase 0.22 Atu1303 exoribonuclease low > 89
Sinorhizobium meliloti 1021 0.29 SMc03009 chemotaxis protein methyltransferase 0.22 SMc01365 exoribonuclease II protein low > 103
Rhizobium sp. OAE497 0.28 ABIE40_RS02885 protein-glutamate O-methyltransferase CheR 0.22 ABIE40_RS07350 ribonuclease R low > 107
Azospirillum sp. SherDot2 0.28 MPMX19_01951 Chemotaxis protein methyltransferase 0.23 MPMX19_01812 Ribonuclease R low > 112
Phaeobacter inhibens DSM 17395 0.28 PGA1_262p02100 methyltransferase, cheR type 0.21 PGA1_c36430 putative ribonuclease R low > 62
Magnetospirillum magneticum AMB-1 0.23 AMB_RS01630 methyltransferase domain-containing protein 0.23 AMB_RS04465 ribonuclease R low > 64
Alteromonas macleodii MIT1002 0.22 MIT1002_01038 Chemotaxis protein methyltransferase 0.37 MIT1002_03606 Ribonuclease R low > 70
Kangiella aquimarina DSM 16071 0.18 B158DRAFT_0184 Methylase of chemotaxis methyl-accepting proteins 0.39 B158DRAFT_1989 ribonuclease R low > 40

Not shown: 6 genomes with orthologs for Xcc-8004.2886.1 only; 22 genomes with orthologs for Xcc-8004.3370.1 only