Conservation of cofitness between Xcc-8004.3816.1 and Xcc-8004.2896.1 in Xanthomonas campestris pv. campestris strain 8004

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 1.0 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.50 9
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I 0.57 RR42_RS18150 long-chain fatty acid--CoA ligase low > 128
Dickeya dadantii 3937 0.74 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I 0.12 DDA3937_RS20750 acyl--CoA ligase low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I 0.59 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD low > 75
Serratia liquefaciens MT49 0.74 IAI46_04980 cytochrome o ubiquinol oxidase subunit I 0.60 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD low > 86
Dickeya dianthicola 67-19 0.74 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I 0.59 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD low > 71
Escherichia coli ECRC100 0.73 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD low > 80
Escherichia fergusonii Becca 0.73 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.59 EFB2_02195 Long-chain-fatty-acid--CoA ligase low > 86
Escherichia coli ECOR38 0.73 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD low > 87
Escherichia coli ECRC102 0.73 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC98 0.73 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD low > 86
Escherichia coli ECRC99 0.73 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECOR27 0.73 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD low > 75
Escherichia coli BW25113 0.73 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) 0.59 b1805 fadD acyl-CoA synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.59 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase low > 73
Escherichia coli Nissle 1917 0.73 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I 0.59 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD low > 55
Escherichia coli ECRC101 0.73 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD low > 87
Escherichia coli BL21 0.73 ECD_00382 cytochrome o ubiquinol oxidase subunit I 0.59 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) low > 61
Escherichia coli ECRC62 0.73 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I 0.59 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD low > 75
Ralstonia solanacearum GMI1000 0.73 RS_RS14605 cytochrome o ubiquinol oxidase subunit I 0.56 RS_RS14290 long-chain-fatty-acid--CoA ligase low > 80
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I 0.57 ABZR87_RS02020 long-chain fatty acid--CoA ligase low > 80
Ralstonia solanacearum PSI07 0.73 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I 0.56 RPSI07_RS10900 long-chain-fatty-acid--CoA ligase low > 81
Pectobacterium carotovorum WPP14 0.73 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I 0.58 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD low > 75
Klebsiella michiganensis M5al 0.73 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I 0.59 BWI76_RS17800 long-chain-fatty-acid--CoA ligase low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.59 MPMX20_02711 Long-chain-fatty-acid--CoA ligase low > 85
Rahnella sp. WP5 0.72 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I 0.59 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD low > 89
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I 0.59 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I 0.56 UW163_RS07285 long-chain-fatty-acid--CoA ligase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I 0.56 RALBFv3_RS06340 long-chain-fatty-acid--CoA ligase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.58 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 78
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS15345 cytochrome o ubiquinol oxidase subunit I 0.55 QEN71_RS27455 long-chain fatty acid--CoA ligase low > 153
Pantoea sp. MT58 0.71 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.60 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD low > 76
Shewanella loihica PV-4 0.70 Shew_0367 cytochrome-c oxidase (RefSeq) 0.60 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.69 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.54 PFLU_RS23680 long-chain fatty acid--CoA ligase low > 109
Alteromonas macleodii MIT1002 0.69 MIT1002_03928 Ubiquinol oxidase subunit 1 0.56 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.54 PFLU_RS23680 long-chain fatty acid--CoA ligase low > 109
Shewanella sp. ANA-3 0.69 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) 0.62 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) low > 73
Pseudomonas simiae WCS417 0.69 PS417_23385 cytochrome o ubiquinol oxidase subunit I 0.54 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.37 25
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.55 Psyr_3834 AMP-dependent synthetase and ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.55 Psyr_3834 AMP-dependent synthetase and ligase — —
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.20 CCNA_01017 acyl-CoA synthetase low > 67
Caulobacter crescentus NA1000 0.69 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.20 CCNA_01017 acyl-CoA synthetase low > 66
Pseudomonas putida KT2440 0.68 PP_0813 cytochrome bo terminal oxidase subunit I 0.56 PP_4549 long-chain-fatty-acid/CoA ligase — —
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS24920 cytochrome O ubiquinol oxidase 0.55 BPHYT_RS17295 long-chain fatty acid--CoA ligase low > 109
Rhizobium sp. OAE497 0.67 ABIE40_RS20865 cytochrome o ubiquinol oxidase subunit I 0.56 ABIE40_RS02155 long-chain fatty acid--CoA ligase low > 107
Acinetobacter radioresistens SK82 0.67 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.50 MPMX26_00141 Long-chain-fatty-acid--CoA ligase low > 36
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_15455 cytochrome o ubiquinol oxidase subunit I 0.54 AO353_03310 long-chain fatty acid--CoA ligase low > 101
Paraburkholderia graminis OAS925 0.67 ABIE53_005341 cytochrome o ubiquinol oxidase subunit 1 0.55 ABIE53_003625 long-chain acyl-CoA synthetase low > 113
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_16965 cytochrome o ubiquinol oxidase subunit I 0.53 AO356_05100 long-chain fatty acid--CoA ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.54 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 103
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.47 Pf1N1B4_575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12315 cytochrome O ubiquinol oxidase 0.54 HSERO_RS19285 long-chain fatty acid--CoA ligase — —
Pseudomonas sp. RS175 0.67 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.54 PFR28_00585 Long-chain-fatty-acid--CoA ligase low > 88
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_03427 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.55 H281DRAFT_06226 long-chain acyl-CoA synthetase low > 103
Agrobacterium fabrum C58 0.66 Atu0141 cytochrome O ubiquinol oxidase subunit I 0.55 Atu0405 long-chain-fatty-acid-CoA-ligase low > 89
Azospirillum brasilense Sp245 0.66 AZOBR_RS23175 cytochrome O ubiquinol oxidase 0.32 AZOBR_RS31155 AMP-dependent synthetase low > 97
Variovorax sp. SCN45 0.66 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.57 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Azospirillum sp. SherDot2 0.66 MPMX19_06176 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.34 MPMX19_02151 Long-chain-fatty-acid--CoA ligase — —
Variovorax sp. OAS795 0.66 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I 0.57 ABID97_RS04445 long-chain-fatty-acid--CoA ligase low > 91
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.54 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Sinorhizobium meliloti 1021 0.65 SM_b21488 cytochrome o ubiquinol oxidase subunit I 0.54 SMc02162 long-chain-fatty-acid--CoA ligase low > 103
Bosea sp. OAE506 0.65 ABIE41_RS21025 cytochrome o ubiquinol oxidase subunit I 0.50 ABIE41_RS11685 AMP-binding protein low > 77
Lysobacter sp. OAE881 0.65 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I 0.80 ABIE51_RS11545 long-chain fatty acid--CoA ligase low > 62
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I 0.71 ABZR86_RS02155 AMP-binding protein low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.64 A4249_RS04450 cytochrome o ubiquinol oxidase subunit I 0.12 A4249_RS07965 long-chain-fatty-acid--CoA ligase low > 48
Sphingomonas koreensis DSMZ 15582 0.64 Ga0059261_1565 cytochrome bo3 quinol oxidase subunit 1 apoprotein (EC 1.10.3.-) 0.24 Ga0059261_1004 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.36 62
Acidovorax sp. GW101-3H11 0.61 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.56 Ac3H11_663 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —

Not shown: 1 genomes with orthologs for Xcc-8004.3816.1 only; 31 genomes with orthologs for Xcc-8004.2896.1 only