| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_019110 | | ABC transporter ATP-binding protein | 1.0 | TX73_016270 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.57 | 6 |
| Rhizobium sp. OAE497 | 0.69 | ABIE40_RS00630 | | ABC transporter ATP-binding protein | 0.75 | ABIE40_RS08865 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 107 |
| Agrobacterium fabrum C58 | 0.69 | Atu0190 | | ABC transporter, nucleotide binding/ATPase protein (peptide) | 0.72 | Atu1364 | | ATP-dependent Clp protease, ATP-binding subunit | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.68 | SMc02829 | | ABC transporter ATP-binding protein | 0.73 | SMc02109 | | ATP-dependent Clp protease ATP-binding subunit protein | — | — |
| Bosea sp. OAE506 | 0.64 | ABIE41_RS23985 | | ABC transporter ATP-binding protein | 0.79 | ABIE41_RS18235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 77 |
| Azospirillum brasilense Sp245 | 0.63 | AZOBR_RS03800 | | microcin ABC transporter ATP-binding protein | 0.70 | AZOBR_RS05175 | | ATP-dependent Clp protease ATP-binding protein | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.63 | AMB_RS22185 | | ABC transporter ATP-binding protein | 0.69 | AMB_RS05705 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_02171 | | putative ABC transporter ATP-binding protein YejF | 0.70 | MPMX19_00503 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 112 |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_0658 | | ABC transporter related (RefSeq) | 0.69 | Dshi_2939 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.60 | PGA1_c30150 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein | 0.69 | PGA1_c25150 | | ATP-dependent Clp protease ATP-binding subunit | low | > 62 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_1755 | | ABC transporter | 0.56 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_1755 | | ABC transporter | 0.56 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_03615 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | 0.55 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Pseudomonas sp. RS175 | 0.58 | PFR28_01546 | | putative ABC transporter ATP-binding protein YejF | 0.56 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_581 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.55 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_2064 | | ABC-type uncharacterized transport system, duplicated ATPase component | 0.56 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | — | — |
| Pseudomonas putida KT2440 | 0.58 | PP_4150 | | microcin C transporter - ATP binding subunit | 0.56 | PP_4008 | | ATP-dependent serine protease | low | > 96 |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A3169 | | ABC transporter component (NCBI) | 0.70 | Rru_A2109 | | ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) | 0.83 | 6 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_24450 | | microcin ABC transporter ATP-binding protein | 0.55 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_23460 | | microcin ABC transporter ATP-binding protein | 0.55 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_3346 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.55 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Klebsiella michiganensis M5al | 0.57 | BWI76_RS19795 | | microcin C ABC transporter ATP-binding protein YejF | 0.55 | BWI76_RS09615 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 92 |
| Pseudomonas simiae WCS417 | 0.57 | PS417_12190 | | microcin ABC transporter ATP-binding protein | 0.56 | PS417_16510 | | Clp protease ClpX | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS12880 | | ABC transporter ATP-binding protein | 0.56 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS12880 | | ABC transporter ATP-binding protein | 0.56 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 109 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1810 | | peptide ABC transporter, ATP-binding protein | 0.57 | HP15_2080 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS12935 | | microcin C ABC transporter ATP-binding protein YejF | 0.56 | HER17_RS12400 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_13870 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | BNILDI_20435 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECRC101 | 0.54 | MCAODC_14425 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | MCAODC_25000 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_04810 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | KEDOAH_22125 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_21140 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | NIAGMN_03825 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_27335 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | JDDGAC_09420 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_14950 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | NOLOHH_22180 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_23375 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | OKFHMN_05785 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Escherichia coli BW25113 | 0.54 | b2180 | yejF | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) | 0.55 | b0882 | clpA | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_22640 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.55 | HEPCGN_22900 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Rahnella sp. WP5 | 0.54 | EX31_RS19145 | | microcin C ABC transporter ATP-binding protein YejF | 0.55 | EX31_RS18560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 89 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS12745 | | microcin C ABC transporter ATP-binding protein YejF | 0.55 | ECOLIN_RS04695 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 55 |
| Escherichia coli BL21 | 0.54 | ECD_02110 | | microcin C ABC transporter ATPase | 0.55 | ECD_00887 | | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | low | > 61 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_5629 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.55 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_01529 | | putative ABC transporter ATP-binding protein YejF | 0.55 | OHPLBJKB_02786 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Escherichia fergusonii Becca | 0.54 | EFB2_01676 | | putative ABC transporter ATP-binding protein YejF | 0.55 | EFB2_03179 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_03146 | | putative ABC transporter ATP-binding protein YejF | 0.55 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_17170 | | ABC transporter ATP-binding protein | 0.54 | CSW01_05805 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 62 |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_0381 | | ABC-type uncharacterized transport system, duplicated ATPase component | 0.55 | EX28DRAFT_2050 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS09215 | | microcin C ABC transporter ATP-binding protein YejF | 0.56 | HGI48_RS09575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 71 |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS09175 | | microcin C ABC transporter ATP-binding protein YejF | 0.56 | DDA3937_RS09560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.61 | 34 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS09520 | | microcin C ABC transporter ATP-binding protein YejF | 0.56 | DZA65_RS09885 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Pantoea sp. MT58 | 0.52 | IAI47_06600 | | microcin C ABC transporter ATP-binding protein YejF | 0.54 | IAI47_12945 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF3756 | | Putative ABC transporter ATP-binding protein | 0.55 | GFF4901 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 78 |
| Serratia liquefaciens MT49 | 0.52 | IAI46_17330 | | microcin C ABC transporter ATP-binding protein YejF | 0.55 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS17580 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.54 | LU632_RS09705 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 74 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_00563 | | microcin C transport system ATP-binding protein | 0.56 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS12370 | | ABC transporter | 0.57 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS06185 | | dipeptide ABC transporter ATP-binding protein | 0.56 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 153 |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_2908 | | ABC transporter ATP-binding protein | 0.55 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS10695 | | ABC transporter ATP-binding protein | 0.56 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS05865 | | ABC transporter ATP-binding protein | 0.56 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS18325 | | ABC transporter ATP-binding protein | 0.55 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF4338 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.56 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS13370 | | microcin ABC transporter ATP-binding protein | 0.56 | RR42_RS17105 | | Clp protease ClpX | low | > 128 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS12520 | | ABC transporter ATP-binding protein | 0.56 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS15050 | | ABC transporter ATP-binding protein | 0.56 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.45 | DVU2387 | | ABC transporter, ATP-binding protein (TIGR) | 0.47 | DVU1602 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) | low | > 55 |
| Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS17130 | | ABC transporter | 0.57 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS16505 | | dipeptide ABC transporter ATP-binding protein | 0.55 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 91 |
| Variovorax sp. SCN45 | 0.44 | GFF226 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | 0.55 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 127 |
| Acinetobacter radioresistens SK82 | 0.43 | MPMX26_02270 | | putative ABC transporter ATP-binding protein YejF | 0.53 | MPMX26_01284 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
Not shown: 5 genomes with orthologs for TX73_019110 only; 21 genomes with orthologs for TX73_016270 only