Conservation of cofitness between RR42_RS19480 and RR42_RS19530 in Cupriavidus basilensis FW507-4G11

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS19480 secretion system protein G 1.0 RR42_RS19530 general secretion pathway protein GspF 0.88 7
Ralstonia sp. UNC404CL21Col 0.84 ABZR87_RS03410 type II secretion system major pseudopilin GspG 0.77 ABZR87_RS03460 type II secretion system inner membrane protein GspF 0.93 4
Ralstonia solanacearum PSI07 0.84 RPSI07_RS09560 type II secretion system protein GspG 0.78 RPSI07_RS09505 type II secretion system protein GspF 0.78 10
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS07700 type II secretion system protein GspG 0.78 RALBFv3_RS07755 type II secretion system protein GspF 0.92 9
Ralstonia solanacearum UW163 0.81 UW163_RS05925 type II secretion system protein GspG 0.78 UW163_RS05870 type II secretion system protein GspF — —
Ralstonia solanacearum GMI1000 0.81 RS_RS15600 type II secretion system protein GspG 0.78 RS_RS15650 type II secretion system protein GspF 0.85 4
Paraburkholderia graminis OAS925 0.75 ABIE53_000300 general secretion pathway protein G 0.68 ABIE53_000298 general secretion pathway protein F 0.86 5
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS29530 type II secretion system protein GspG 0.68 QEN71_RS29520 type II secretion system inner membrane protein GspF 0.49 5
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_02352 general secretion pathway protein G 0.68 H281DRAFT_02354 general secretion pathway protein F 0.56 3
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS19615 general secretion pathway protein G 0.69 BPHYT_RS19605 general secretion pathway protein F — —
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2038 General secretion pathway protein G 0.49 Ac3H11_4054 General secretion pathway protein F / Type II secretory pathway, component PulF 0.91 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF1382 General secretion pathway protein G 0.46 GFF1392 General secretion pathway protein F / Type II secretory pathway, component PulF 0.34 67
Variovorax sp. SCN45 0.65 GFF5244 General secretion pathway protein G 0.48 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF low > 127
Variovorax sp. OAS795 0.64 ABID97_RS06990 type II secretion system major pseudopilin GspG 0.49 ABID97_RS06940 type II secretion system inner membrane protein GspF low > 91
Pseudomonas stutzeri RCH2 0.61 Psest_4200 general secretion pathway protein G 0.43 Psest_4201 general secretion pathway protein F low > 67
Pseudomonas fluorescens SBW25 0.59 PFLU_RS11870 type II secretion system protein GspG 0.53 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS11870 type II secretion system protein GspG 0.53 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas sp. S08-1 0.59 OH686_11775 type II secretion system protein G 0.40 OH686_11780 type II secretion system protein F — —
Pseudomonas simiae WCS417 0.58 PS417_11275 general secretion pathway protein GspG 0.51 PS417_11305 general secretion pathway protein GspF low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_647 General secretion pathway protein G 0.51 Pf6N2E2_653 General secretion pathway protein F low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_24770 type II secretion system protein GspG 0.51 AO356_24800 type II secretion system protein GspF low > 104
Pseudomonas sp. RS175 0.56 PFR28_01746 Type II secretion system protein G 0.50 PFR28_01752 Type II secretion system protein F low > 88
Marinobacter adhaerens HP15 0.56 HP15_1604 general secretion pathway protein G 0.46 HP15_1603 general secretion pathway protein F 0.82 2
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_13775 type II secretion system protein GspG 0.40 CSW01_13780 type II secretion system protein GspF — —
Pseudomonas putida KT2440 0.54 PP_1049 putative protein secretion protein for export 0.30 PP_1048 putative protein secretion protein for export low > 96
Erwinia tracheiphila SCR3 0.52 LU632_RS25245 gspG type II secretion system major pseudopilin GspG 0.32 LU632_RS25240 gspF type II secretion system inner membrane protein GspF low > 74
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.945.1 General secretion pathway protein G 0.32 Xcc-8004.944.1 General secretion pathway protein F low > 74
Escherichia fergusonii Becca 0.52 EFB2_00848 Type II secretion system protein G 0.33 EFB2_00496 Putative type II secretion system protein F low > 86
Escherichia coli ECOR38 0.52 HEPCGN_18065 gspG general secretion pathway protein G 0.33 HEPCGN_18060 gspF general secretion pathway protein F 0.94 3
Escherichia coli BL21 0.52 ECD_02835 putative type II secretion protein GspG 0.33 ECD_03178 general secretory pathway component, cryptic low > 61
Escherichia coli ECOR27 0.52 NOLOHH_10990 gspG general secretion pathway protein G 0.33 NOLOHH_10985 gspF general secretion pathway protein F low > 75
Escherichia coli Nissle 1917 0.52 ECOLIN_RS17070 type II secretion system major pseudopilin GspG 0.33 ECOLIN_RS19070 type II secretion system inner membrane protein GspF low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00742 Type II secretion system protein G 0.33 OHPLBJKB_00376 Putative type II secretion system protein F low > 73
Pectobacterium carotovorum WPP14 0.51 HER17_RS06700 type II secretion system major pseudopilin GspG 0.41 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS14720 type II secretion system major pseudopilin GspG 0.40 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS15665 type II secretion system major pseudopilin GspG 0.40 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12560 type II secretion system protein GspG 0.39 AO353_12555 type II secretion system protein GspF low > 101
Dickeya dadantii 3937 0.51 DDA3937_RS14785 type II secretion system major pseudopilin GspG 0.40 DDA3937_RS14790 type II secretion system inner membrane protein GspF 0.56 27
Shewanella loihica PV-4 0.51 Shew_3616 general secretion pathway protein G (RefSeq) 0.43 Shew_3617 general secretion pathway protein F (RefSeq) — —
Caulobacter crescentus NA1000 0.50 CCNA_00175 type II secretion pathway protein G 0.29 CCNA_00174 type II secretion pathway protein F 0.56 47
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00175 type II secretion pathway protein G 0.29 CCNA_00174 type II secretion pathway protein F low > 67
Escherichia coli ECRC98 0.49 JDDGAC_30310 gspG type II secretion system major pseudopilin GspG 0.34 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF low > 86
Escherichia coli ECRC101 0.49 MCAODC_15280 gspG type II secretion system major pseudopilin GspG 0.34 MCAODC_15275 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli ECRC100 0.49 OKFHMN_00270 gspG type II secretion system major pseudopilin GspG 0.34 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF low > 80
Escherichia coli ECRC102 0.49 NIAGMN_28590 gspG type II secretion system major pseudopilin GspG 0.34 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_263 General secretion pathway protein G 0.39 PfGW456L13_264 General secretion pathway protein F low > 87
Klebsiella michiganensis M5al 0.49 BWI76_RS05075 type II secretion system protein GspG 0.38 BWI76_RS05080 type II secretion protein F low > 92
Shewanella amazonensis SB2B 0.48 Sama_0172 general secretion pathway protein G (RefSeq) 0.39 Sama_0171 general secretion pathway protein F (RefSeq) — —
Alteromonas macleodii MIT1002 0.48 MIT1002_03979 Pullulanase secretion protein PulG 0.38 MIT1002_03978 General secretion pathway protein F 0.99 4
Rahnella sp. WP5 0.48 EX31_RS16180 type II secretion system major pseudopilin GspG 0.33 EX31_RS16175 type II secretion system inner membrane protein GspF low > 89
Shewanella sp. ANA-3 0.47 Shewana3_0154 general secretion pathway protein G (RefSeq) 0.40 Shewana3_0153 general secretion pathway protein F (RefSeq) 0.84 3
Shewanella oneidensis MR-1 0.47 SO0169 gspG general secretion pathway protein G (NCBI ptt file) 0.41 SO0168 gspF general secretion pathway protein F (NCBI ptt file) 0.93 4
Enterobacter sp. TBS_079 0.47 MPMX20_01518 Type II secretion system protein G 0.35 MPMX20_01517 Putative type II secretion system protein F low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2076 type II secretion system protein G 0.34 EX28DRAFT_2077 type II secretion system protein F low > 76
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_0692 general secretion pathway protein G 0.39 B158DRAFT_0691 general secretion pathway protein F — —
Acinetobacter radioresistens SK82 0.39 MPMX26_00284 Type II secretion system protein G 0.37 MPMX26_00283 Type II secretion system protein F 0.59 24
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3949 type II secretion system protein G 0.31 Ga0059261_3953 Type II secretory pathway, component PulF 0.92 1
Escherichia coli BW25113 0.37 b3328 gspG pseudopilin, cryptic, general secretion pathway (NCBI) 0.33 b3327 gspF general secretory pathway component, cryptic (NCBI) 0.21 12
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09610 type II secretion system major pseudopilin GspG 0.26 LRK55_RS09605 type II secretion system inner membrane protein GspF low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_16225 gspG type II secretion system major pseudopilin GspG 0.25 OKGIIK_16220 gspF type II secretion system inner membrane protein GspF 0.58 38
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS09970 type II secretion system major pseudopilin GspG 0.27 LRK54_RS09965 type II secretion system inner membrane protein GspF 0.36 1
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS13105 type II secretion system major pseudopilin GspG 0.27 ABZR86_RS13110 type II secretion system inner membrane protein GspF 0.92 6

Not shown: 4 genomes with orthologs for RR42_RS19480 only; 0 genomes with orthologs for RR42_RS19530 only