Conservation of cofitness between RR42_RS15475 and RR42_RS01185 in Cupriavidus basilensis FW507-4G11

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS15475 protein tolQ 1.0 RR42_RS01185 muropeptide transporter 0.55 13
Ralstonia sp. UNC404CL21Col 0.87 ABZR87_RS08970 protein TolQ 0.81 ABZR87_RS05635 muropeptide transporter low > 80
Ralstonia solanacearum PSI07 0.87 RPSI07_RS20315 protein TolQ 0.80 RPSI07_RS23200 MFS transporter low > 81
Ralstonia solanacearum UW163 0.87 UW163_RS00655 protein TolQ 0.80 UW163_RS03435 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.87 RALBFv3_RS12910 protein TolQ 0.80 RALBFv3_RS10145 MFS transporter low > 76
Ralstonia solanacearum GMI1000 0.83 RS_RS03685 protein TolQ 0.81 RS_RS00760 MFS transporter low > 80
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS03710 protein tolQ 0.32 BPHYT_RS01585 major facilitator superfamily protein — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS26250 protein TolQ 0.34 QEN71_RS00280 AmpG family muropeptide MFS transporter — —
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_04722 Cell division and transport-associated protein TolQ 0.33 H281DRAFT_02216 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG low > 103
Paraburkholderia graminis OAS925 0.73 ABIE53_000885 biopolymer transport protein TolQ 0.33 ABIE53_000412 PAT family beta-lactamase induction signal transducer AmpG low > 113
Dechlorosoma suillum PS 0.70 Dsui_0482 TolQ protein 0.43 Dsui_0739 Major Facilitator Superfamily transporter — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS09835 protein TolQ 0.62 ABCV34_RS10915 muropeptide transporter — —
Variovorax sp. OAS795 0.57 ABID97_RS17970 protein TolQ 0.26 ABID97_RS03830 AmpG family muropeptide MFS transporter 0.53 38
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF5173 MotA/TolQ/ExbB proton channel family protein 0.25 GFF1869 AmpG permease low > 90
Variovorax sp. SCN45 0.57 GFF575 Tol-Pal system protein TolQ 0.26 GFF5071 AmpG permease 0.82 125
Acidovorax sp. GW101-3H11 0.57 Ac3H11_3137 MotA/TolQ/ExbB proton channel family protein 0.27 Ac3H11_3358 AmpG permease — —
Lysobacter sp. OAE881 0.51 ABIE51_RS05065 protein TolQ 0.25 ABIE51_RS00050 MFS transporter — —
Shewanella sp. ANA-3 0.50 Shewana3_2534 MotA/TolQ/ExbB proton channel (RefSeq) 0.29 Shewana3_0783 major facilitator transporter (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS10820 protein TolQ 0.25 ABZR86_RS15655 MFS transporter — —
Shewanella oneidensis MR-1 0.49 SO2751 MotA/TolQ/ExbB proton channel family protein (NCBI ptt file) 0.29 SO3814 ampG protein, putative (NCBI ptt file) — —
Rahnella sp. WP5 0.49 EX31_RS23480 Tol-Pal system protein TolQ 0.69 EX31_RS22225 muropeptide MFS transporter AmpG low > 89
Alteromonas macleodii MIT1002 0.49 MIT1002_01335 Biopolymer transport protein ExbB 0.28 MIT1002_00655 muropeptide transporter — —
Dickeya dianthicola 67-19 0.48 HGI48_RS06545 Tol-Pal system protein TolQ 0.65 HGI48_RS05665 muropeptide MFS transporter AmpG low > 71
Dickeya dianthicola ME23 0.48 DZA65_RS06895 Tol-Pal system protein TolQ 0.65 DZA65_RS05990 muropeptide MFS transporter AmpG low > 75
Shewanella loihica PV-4 0.48 Shew_1524 MotA/TolQ/ExbB proton channel (RefSeq) 0.28 Shew_2892 major facilitator transporter (RefSeq) low > 60
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2254 TolQ protein 0.67 EX28DRAFT_2538 AmpG-like permease — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_1138 Cell division and transport-associated protein TolQ (TC 2.C.1.2.1) 0.24 B158DRAFT_0920 Major Facilitator Superfamily. — —
Pantoea sp. MT58 0.48 IAI47_13700 Tol-Pal system protein TolQ 0.66 IAI47_14675 muropeptide MFS transporter AmpG low > 76
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_09210 protein TolQ 0.23 CSW01_11705 MFS transporter — —
Serratia liquefaciens MT49 0.48 IAI46_06320 Tol-Pal system protein TolQ 0.71 IAI46_04990 muropeptide MFS transporter AmpG — —
Dickeya dadantii 3937 0.48 DDA3937_RS06500 Tol-Pal system protein TolQ 0.65 DDA3937_RS05620 muropeptide MFS transporter AmpG — —
Enterobacter sp. TBS_079 0.47 MPMX20_01366 Tol-Pal system protein TolQ 0.67 MPMX20_01024 Anhydromuropeptide permease low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS08520 colicin transporter TolQ 0.67 BWI76_RS06500 muropeptide transporter AmpG low > 92
Pectobacterium carotovorum WPP14 0.47 HER17_RS14880 Tol-Pal system protein TolQ 0.67 HER17_RS15870 muropeptide MFS transporter AmpG low > 75
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_01860 tolQ protein TolQ 0.26 OKGIIK_15695 MFS transporter — —
Erwinia tracheiphila SCR3 0.46 LU632_RS16045 tolQ Tol-Pal system protein TolQ 0.59 LU632_RS18370 ampG muropeptide MFS transporter AmpG — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS04890 protein TolQ 0.26 LRK54_RS09200 MFS transporter — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS04670 protein TolQ 0.26 LRK55_RS08730 MFS transporter — —
Escherichia fergusonii Becca 0.45 EFB2_03369 Tol-Pal system protein TolQ 0.67 EFB2_03624 Anhydromuropeptide permease low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02976 Protein TolQ 0.67 OHPLBJKB_03240 Protein AmpG low > 73
Escherichia coli BL21 0.45 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex 0.67 ECD_00384 muropeptide transporter — —
Escherichia coli BW25113 0.45 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) 0.67 b0433 ampG muropeptide transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS03925 Tol-Pal system protein TolQ 0.67 ECOLIN_RS02600 muropeptide MFS transporter AmpG low > 55
Escherichia coli ECOR27 0.45 NOLOHH_23255 tolQ Tol-Pal system protein TolQ 0.67 NOLOHH_01290 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC100 0.45 OKFHMN_06820 tolQ Tol-Pal system protein TolQ 0.67 OKFHMN_08355 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC102 0.45 NIAGMN_04870 tolQ Tol-Pal system protein TolQ 0.67 NIAGMN_06410 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC62 0.45 BNILDI_21250 tolQ Tol-Pal system protein TolQ 0.67 BNILDI_22705 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECRC99 0.45 KEDOAH_21145 tolQ Tol-Pal system protein TolQ 0.67 KEDOAH_19610 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECOR38 0.45 HEPCGN_01450 tolQ Tol-Pal system protein TolQ 0.67 HEPCGN_06970 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli ECRC101 0.45 MCAODC_26040 tolQ Tol-Pal system protein TolQ 0.67 MCAODC_27580 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli ECRC98 0.45 JDDGAC_10475 tolQ Tol-Pal system protein TolQ 0.67 JDDGAC_12010 ampG muropeptide MFS transporter AmpG 0.66 34
Marinobacter adhaerens HP15 0.45 HP15_2038 MotA/TolQ/ExbB proton channel 0.28 HP15_2363 major facilitator superfamily MFS_1 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4651 MotA/TolQ/ExbB proton channel family protein 0.65 GFF4348 AmpG permease — —
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1441.1 MotA/TolQ/ExbB proton channel family protein 0.24 Xcc-8004.4880.1 AmpG permease — —
Shewanella amazonensis SB2B 0.42 Sama_2089 MotA/TolQ/ExbB proton channel (RefSeq) 0.29 Sama_2556 AmpG protein, putative (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.39 AMB_RS16235 protein TolQ 0.37 AMB_RS22710 MFS transporter — —
Azospirillum brasilense Sp245 0.39 AZOBR_RS09060 biopolymer transporter ExbB 0.34 AZOBR_RS09735 MFS transporter permease — —
Azospirillum sp. SherDot2 0.37 MPMX19_00700 Tol-Pal system protein TolQ 0.34 MPMX19_04371 Anhydromuropeptide permease — —
Rhizobium sp. OAE497 0.37 ABIE40_RS15615 protein TolQ 0.09 ABIE40_RS22775 MFS transporter — —
Sinorhizobium meliloti 1021 0.36 SMc03958 transport transmembrane protein 0.14 SMa2337 RhtX rhizobactin transporter — —
Rhodopseudomonas palustris CGA009 0.35 TX73_005740 protein TolQ 0.32 TX73_003205 MFS transporter — —

Not shown: 25 genomes with orthologs for RR42_RS15475 only; 6 genomes with orthologs for RR42_RS01185 only