| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS06555 | | 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) | 1.0 | RR42_RS00955 | | hydroxymethylglutaryl-CoA lyase | 0.62 | 4 |
| Ralstonia solanacearum GMI1000 | 0.90 | RS_RS07905 | | CoA transferase subunit A | 0.77 | RS_RS01280 | | hydroxymethylglutaryl-CoA lyase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS05245 | | CoA transferase subunit A | 0.75 | QEN71_RS01060 | | hydroxymethylglutaryl-CoA lyase | low | > 153 |
| Ralstonia solanacearum UW163 | 0.86 | UW163_RS15140 | | CoA transferase subunit A | 0.77 | UW163_RS03145 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.86 | RALBFv3_RS01830 | | CoA transferase subunit A | 0.77 | RALBFv3_RS10435 | | hydroxymethylglutaryl-CoA lyase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.85 | RPSI07_RS15660 | | CoA transferase subunit A | 0.78 | RPSI07_RS22880 | | hydroxymethylglutaryl-CoA lyase | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.84 | BPHYT_RS13675 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.74 | BPHYT_RS02130 | | hydroxymethylglutaryl-CoA lyase | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.82 | ABCV34_RS00770 | | CoA transferase subunit A | 0.69 | ABCV34_RS14190 | | hydroxymethylglutaryl-CoA lyase | 0.93 | 8 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.81 | H281DRAFT_04495 | | 3-oxoacid CoA-transferase subunit A | 0.74 | H281DRAFT_02101 | | hydroxymethylglutaryl-CoA lyase | 0.35 | 53 |
| Lysobacter sp. OAE881 | 0.81 | ABIE51_RS04380 | | CoA transferase subunit A | 0.56 | ABIE51_RS13205 | | hydroxymethylglutaryl-CoA lyase | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.81 | MPMX26_00627 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.47 | MPMX26_00628 | | 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase | — | — |
| Paraburkholderia graminis OAS925 | 0.80 | ABIE53_002909 | | 3-oxoacid CoA-transferase subunit A | 0.74 | ABIE53_000573 | | hydroxymethylglutaryl-CoA lyase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.80 | HSERO_RS23190 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.72 | HSERO_RS23475 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.80 | ABZR87_RS13770 | | CoA transferase subunit A | 0.80 | ABZR87_RS06250 | | hydroxymethylglutaryl-CoA lyase | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.79 | Ac3H11_132 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.60 | Ac3H11_3018 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.79 | Xcc-8004.4478.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.52 | Xcc-8004.2923.1 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.80 | 3 |
| Pseudomonas stutzeri RCH2 | 0.78 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | 0.59 | Psest_1079 | | Isopropylmalate/homocitrate/citramalate synthases | 0.47 | 9 |
| Variovorax sp. OAS795 | 0.78 | ABID97_RS19440 | | CoA transferase subunit A | 0.63 | ABID97_RS25100 | | hydroxymethylglutaryl-CoA lyase | low | > 91 |
| Variovorax sp. SCN45 | 0.76 | GFF7371 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.63 | GFF2023 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF5197 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.61 | GFF1709 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | low | > 90 |
| Rhodopseudomonas palustris CGA009 | 0.73 | TX73_021545 | | CoA transferase subunit A | 0.48 | TX73_013125 | | hydroxymethylglutaryl-CoA lyase | low | > 86 |
| Caulobacter crescentus NA1000 | 0.70 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.37 | CCNA_00500 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.70 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.37 | CCNA_00500 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.70 | A4249_RS02960 | | CoA transferase subunit A | 0.36 | A4249_RS14615 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.68 | Dshi_1136 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.47 | Dshi_1303 | | Hydroxymethylglutaryl-CoA lyase (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.67 | PGA1_c06210 | | probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.44 | PGA1_c10340 | | hydroxymethylglutaryl-CoA lyase MvaB | — | — |
| Shewanella loihica PV-4 | 0.66 | Shew_2575 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.58 | Shew_2574 | | pyruvate carboxyltransferase (RefSeq) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.65 | CA264_04625 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.22 | CA264_09230 | | hydroxymethylglutaryl-CoA lyase | low | > 74 |
| Shewanella oneidensis MR-1 | 0.64 | SO1892 | atoD | acetate CoA-transferase, subunit A (NCBI ptt file) | 0.55 | SO1893 | mvaB | hydroxymethylglutaryl-CoA lyase (NCBI ptt file) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.64 | CA265_RS06305 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.22 | CA265_RS13115 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) | low | > 88 |
| Shewanella amazonensis SB2B | 0.64 | Sama_0518 | | 3-oxoacid CoA-transferase (RefSeq) | 0.56 | Sama_1358 | | pyruvate carboxyltransferase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_1667 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.55 | Shewana3_1668 | | hydroxymethylglutaryl-CoA lyase (RefSeq) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.63 | ABZR88_RS15870 | | CoA transferase subunit A | 0.24 | ABZR88_RS14025 | | hydroxymethylglutaryl-CoA lyase | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.63 | Echvi_3272 | | 3-oxoacid CoA-transferase, A subunit | 0.21 | Echvi_3855 | | Isopropylmalate/homocitrate/citramalate synthases | low | > 79 |
| Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_2505 | | 3-oxoacid CoA-transferase, A subunit | 0.58 | B158DRAFT_2506 | | Isopropylmalate/homocitrate/citramalate synthases | — | — |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_02001 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.53 | MIT1002_01665 | | Hydroxymethylglutaryl-CoA lyase YngG | low | > 70 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_5833 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.56 | Pf1N1B4_3990 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | low | > 87 |
| Pseudomonas putida KT2440 | 0.60 | PP_3122 | | acetoacetyl CoA-transferase (subunit A) | 0.57 | PP_3540 | | Hydroxymethylglutaryl-CoA lyase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | 0.56 | Pf6N2E2_2189 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.31 | 3 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_01325 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.56 | PFR28_01262 | | 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.56 | AO356_01570 | | hydroxymethylglutaryl-CoA lyase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.56 | AO353_20365 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | 0.58 | PFLU_RS18955 | | hydroxymethylglutaryl-CoA lyase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.58 | PS417_17005 | | hydroxymethylglutaryl-CoA lyase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | 0.58 | PFLU_RS18955 | | hydroxymethylglutaryl-CoA lyase | 0.17 | 48 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | 0.57 | Psyr_2471 | | hydroxymethylglutaryl-CoA lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | 0.57 | Psyr_2471 | | hydroxymethylglutaryl-CoA lyase | low | > 86 |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_03462 | | Acetate CoA-transferase subunit alpha | 0.63 | MPMX19_03941 | | 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase | low | > 112 |
| Rhodospirillum rubrum S1H | 0.34 | Rru_A1383 | | Acetate CoA-transferase (NCBI) | 0.52 | Rru_A1940 | | Pyruvate carboxyltransferase (NCBI) | — | — |
Not shown: 14 genomes with orthologs for RR42_RS06555 only; 13 genomes with orthologs for RR42_RS00955 only