| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS02380 | | M48 family metalloprotease | 1.0 | QEN71_RS27145 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.60 | 7 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS16315 | | peptidase M48 Ste24p | 0.87 | BPHYT_RS16990 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.74 | H281DRAFT_04199 | | Putative Zn-dependent protease, contains TPR repeats | 0.87 | H281DRAFT_06288 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS21205 | | peptidase M48 | 0.72 | RPSI07_RS11275 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS02810 | | peptidase M48 | 0.72 | RS_RS13915 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS01485 | | peptidase M48 | 0.72 | UW163_RS07655 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS12125 | | peptidase M48 | 0.72 | RALBFv3_RS05970 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.63 | 43 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS08020 | | M48 family metalloprotease | 0.72 | ABZR87_RS01630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS03145 | | peptidase M48 | 0.72 | RR42_RS17675 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS03305 | | peptidase M48 | 0.71 | HSERO_RS01965 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.25 | ABCV34_RS07945 | | M48 family metalloprotease | 0.61 | ABCV34_RS10690 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 48 |
| Dechlorosoma suillum PS | 0.23 | Dsui_0003 | | putative Zn-dependent protease | 0.67 | Dsui_0384 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 51 |
| Variovorax sp. OAS795 | 0.18 | ABID97_RS02095 | | M48 family metalloprotease | 0.61 | ABID97_RS06355 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 91 |
| Pseudomonas putida KT2440 | 0.18 | PP_1232 | | conserved exported protein of unknown function | 0.58 | PP_0547 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.18 | OH686_19195 | | Exported zinc metalloprotease YfgC precursor | 0.58 | OH686_09400 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.18 | Ac3H11_1239 | | Peptidase M48, Ste24p precursor | 0.55 | Ac3H11_4032 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | low | > 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.17 | Psyr_1543 | | Peptidase M48, Ste24p | 0.57 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.63 | 6 |
| Pseudomonas syringae pv. syringae B728a | 0.17 | Psyr_1543 | | Peptidase M48, Ste24p | 0.57 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_17645 | | peptidase M48 | 0.57 | AO353_06550 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 101 |
| Shewanella loihica PV-4 | 0.17 | Shew_1841 | | peptidase M48, Ste24p (RefSeq) | 0.56 | Shew_3144 | | UDP-N-acetylmuramate (RefSeq) | low | > 60 |
| Pseudomonas fluorescens FW300-N2C3 | 0.17 | AO356_04555 | | peptidase M48 | 0.57 | AO356_15235 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_2752 | | Exported zinc metalloprotease YfgC precursor | 0.57 | Pf6N2E2_4982 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | low | > 103 |
| Variovorax sp. SCN45 | 0.16 | GFF5421 | | Peptidase M48, Ste24p precursor | 0.63 | GFF4445 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) | low | > 127 |
| Pseudomonas fluorescens GW456-L13 | 0.16 | PfGW456L13_4512 | | Exported zinc metalloprotease YfgC precursor | 0.57 | PfGW456L13_1344 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.43 | 54 |
| Pseudomonas fluorescens FW300-N1B4 | 0.16 | Pf1N1B4_3327 | | Exported zinc metalloprotease YfgC precursor | 0.57 | Pf1N1B4_2676 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | — | — |
| Pseudomonas sp. RS175 | 0.16 | PFR28_00694 | | Beta-barrel assembly-enhancing protease | 0.57 | PFR28_03883 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | low | > 88 |
| Kangiella aquimarina DSM 16071 | 0.16 | B158DRAFT_2440 | | Putative Zn-dependent protease, contains TPR repeats | 0.51 | B158DRAFT_2035 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | low | > 40 |
| Shewanella sp. ANA-3 | 0.16 | Shewana3_1649 | | peptidase M48, Ste24p (RefSeq) | 0.57 | Shewana3_0791 | | UDP-N-acetylmuramate (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.16 | Sama_1913 | | peptidase M48, Ste24p (RefSeq) | 0.57 | Sama_0769 | | UDP-N-acetylmuramate (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.16 | SO2869 | | conserved hypothetical protein (NCBI ptt file) | 0.57 | SO3805 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.16 | Psest_1510 | | Putative Zn-dependent protease, contains TPR repeats | 0.58 | Psest_0673 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | low | > 67 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS06050 | | M48 family metallopeptidase | 0.58 | DDA3937_RS18580 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 74 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_07140 | | peptidase M48 | 0.58 | PS417_24800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.15 | MPMX26_01126 | | Beta-barrel assembly-enhancing protease | 0.51 | MPMX26_03053 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | — | — |
| Pseudomonas fluorescens SBW25 | 0.15 | PFLU_RS07250 | | M48 family metallopeptidase | 0.58 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.64 | 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.15 | PFLU_RS07250 | | M48 family metallopeptidase | 0.58 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 109 |
| Rahnella sp. WP5 | 0.15 | EX31_RS22720 | | M48 family metallopeptidase | 0.54 | EX31_RS08665 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 89 |
| Dickeya dianthicola ME23 | 0.15 | DZA65_RS06445 | | M48 family metallopeptidase | 0.57 | DZA65_RS19650 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.15 | HGI48_RS06095 | | M48 family metallopeptidase | 0.57 | HGI48_RS18515 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 71 |
| Serratia liquefaciens MT49 | 0.15 | IAI46_18840 | | M48 family metallopeptidase | 0.57 | IAI46_01800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 86 |
| Dyella japonica UNC79MFTsu3.2 | 0.14 | ABZR86_RS00725 | | M48 family metalloprotease | 0.50 | ABZR86_RS17365 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.14 | OKGIIK_03795 | | Putative beta-barrel assembly-enhancing protease | 0.50 | OKGIIK_17020 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.14 | CSW01_10785 | | hypothetical protein | 0.58 | CSW01_12875 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.14 | MIT1002_02211 | | TPR repeat-containing protein YfgC precursor | 0.57 | MIT1002_00168 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 70 |
| Pantoea sp. MT58 | 0.13 | IAI47_05205 | | M48 family metallopeptidase | 0.57 | IAI47_02755 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS15440 | | M48 family metallopeptidase | 0.57 | HER17_RS02615 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.13 | GFF2175 | | Exported zinc metalloprotease YfgC precursor | 0.57 | GFF881 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.13 | LU632_RS08305 | | M48 family metallopeptidase | 0.55 | LU632_RS02135 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 74 |
| Enterobacter asburiae PDN3 | 0.13 | EX28DRAFT_0178 | | Putative Zn-dependent protease, contains TPR repeats | 0.57 | EX28DRAFT_3420 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | low | > 76 |
| Escherichia coli BL21 | 0.13 | ECD_02386 | | OM protein maintenance and assembly metalloprotease and chaperone, periplasmic | 0.57 | ECD_04101 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | — | — |
| Escherichia coli ECRC62 | 0.13 | BNILDI_12295 | bepA | beta-barrel assembly-enhancing protease | 0.57 | BNILDI_07315 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 75 |
| Escherichia coli ECRC99 | 0.13 | KEDOAH_06385 | bepA | beta-barrel assembly-enhancing protease | 0.57 | KEDOAH_16215 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | — | — |
| Escherichia coli ECOR27 | 0.13 | NOLOHH_13485 | bepA | beta-barrel assembly-enhancing protease | 0.57 | NOLOHH_04200 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 75 |
| Escherichia coli BW25113 | 0.13 | b2494 | yfgC | predicted peptidase (NCBI) | 0.57 | b4233 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) | 0.34 | 49 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.13 | OHPLBJKB_01232 | | Beta-barrel assembly-enhancing protease | 0.58 | OHPLBJKB_03802 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | low | > 73 |
| Escherichia coli ECRC98 | 0.13 | JDDGAC_25780 | bepA | beta-barrel assembly-enhancing protease | 0.57 | JDDGAC_15580 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 86 |
| Escherichia coli ECRC101 | 0.13 | MCAODC_12365 | bepA | beta-barrel assembly-enhancing protease | 0.57 | MCAODC_02445 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 87 |
| Escherichia coli ECRC100 | 0.13 | OKFHMN_21835 | bepA | beta-barrel assembly-enhancing protease | 0.57 | OKFHMN_11940 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 80 |
| Escherichia coli ECOR38 | 0.13 | HEPCGN_21000 | bepA | beta-barrel assembly-enhancing protease | 0.57 | HEPCGN_10140 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | low | > 87 |
| Escherichia coli ECRC102 | 0.13 | NIAGMN_19605 | bepA | beta-barrel assembly-enhancing protease | 0.57 | NIAGMN_09790 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase | — | — |
| Escherichia fergusonii Becca | 0.12 | EFB2_01404 | | Beta-barrel assembly-enhancing protease | 0.57 | EFB2_04300 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.12 | ECOLIN_RS14165 | | beta-barrel assembly-enhancing protease | 0.57 | ECOLIN_RS24560 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.62 | 14 |
| Marinobacter adhaerens HP15 | 0.12 | HP15_2031 | | putative Zn-dependent protease, contains TPR repeats | 0.52 | HP15_616 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | low | > 73 |
| Klebsiella michiganensis M5al | 0.12 | BWI76_RS20925 | | peptidase M48 | 0.57 | BWI76_RS02820 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.12 | MPMX20_03344 | | Beta-barrel assembly-enhancing protease | 0.57 | MPMX20_00515 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | low | > 85 |
Not shown: 0 genomes with orthologs for QEN71_RS02380 only; 9 genomes with orthologs for QEN71_RS27145 only