| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS03230 | | YggT family protein | 1.0 | QEN71_RS01300 | | D-alanyl-D-alanine carboxypeptidase family protein | 0.64 | 12 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.86 | H281DRAFT_04033 | | YggT family protein | 0.86 | H281DRAFT_02054 | | penicillin-binding protein 6. Serine peptidase. MEROPS family S11 | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.81 | BPHYT_RS15440 | | membrane protein | 0.87 | BPHYT_RS02415 | | cytochrome C550 | — | — |
| Paraburkholderia graminis OAS925 | 0.81 | ABIE53_003258 | | YggT family protein | 0.88 | ABIE53_000626 | | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS18295 | | YggT family protein | 0.56 | ABZR87_RS06610 | | D-alanyl-D-alanine carboxypeptidase family protein | 0.28 | 23 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS23805 | | YggT family protein | 0.57 | RS_RS01610 | | D-alanyl-D-alanine carboxypeptidase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS06140 | | YggT family protein | 0.57 | RPSI07_RS22545 | | D-alanyl-D-alanine carboxypeptidase | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS36110 | | membrane protein | 0.58 | RR42_RS01680 | | cytochrome C550 | low | > 128 |
| Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS10650 | | YggT family protein | 0.43 | ABCV34_RS13340 | | D-alanyl-D-alanine carboxypeptidase family protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS17510 | | YggT family protein | 0.56 | RALBFv3_RS10770 | | D-alanyl-D-alanine carboxypeptidase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS21640 | | YggT family protein | 0.56 | UW163_RS02810 | | D-alanyl-D-alanine carboxypeptidase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_02445 | | hypothetical protein | 0.34 | CSW01_04845 | | D-alanyl-D-alanine carboxypeptidase | low | > 62 |
| Klebsiella michiganensis M5al | 0.31 | BWI76_RS24105 | | resistance protein | 0.33 | BWI76_RS09145 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 92 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_03063 | | YGGT family protein | 0.35 | MIT1002_01848 | | D-alanyl-D-alanine carboxypeptidase DacC precursor | — | — |
| Enterobacter sp. TBS_079 | 0.30 | MPMX20_03810 | | hypothetical protein | 0.35 | MPMX20_01477 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 85 |
| Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_2990 | | Predicted integral membrane protein | 0.35 | EX28DRAFT_2127 | | D-alanyl-D-alanine carboxypeptidase | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_08170 | | hypothetical protein | 0.37 | AO353_06455 | | D-alanyl-D-alanine carboxypeptidase | 0.33 | 36 |
| Pectobacterium carotovorum WPP14 | 0.29 | HER17_RS03800 | | YggT family protein | 0.34 | HER17_RS12545 | | serine hydrolase | low | > 75 |
| Pantoea sp. MT58 | 0.29 | IAI47_03590 | | YggT family protein | 0.34 | IAI47_13090 | | serine hydrolase | low | > 76 |
| Escherichia coli ECRC98 | 0.29 | JDDGAC_22880 | yggT | osmotic shock tolerance protein YggT | 0.35 | JDDGAC_09675 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.29 | ECOLIN_RS16420 | | osmotic shock tolerance protein YggT | 0.35 | ECOLIN_RS04460 | | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Escherichia coli ECRC99 | 0.29 | KEDOAH_08890 | yggT | osmotic shock tolerance protein YggT | 0.35 | KEDOAH_21870 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Escherichia fergusonii Becca | 0.29 | EFB2_00950 | | hypothetical protein | 0.35 | EFB2_03267 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 86 |
| Escherichia coli ECRC102 | 0.29 | NIAGMN_17015 | yggT | osmotic shock tolerance protein YggT | 0.35 | NIAGMN_04085 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Escherichia coli BL21 | 0.29 | ECD_02782 | | putative inner membrane protein; compensates for loss in K+ uptake | 0.36 | ECD_00806 | | D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a | — | — |
| Escherichia coli ECOR27 | 0.29 | NOLOHH_11120 | yggT | osmotic shock tolerance protein YggT | 0.35 | NOLOHH_22410 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Escherichia coli ECRC101 | 0.29 | MCAODC_09770 | yggT | osmotic shock tolerance protein YggT | 0.35 | MCAODC_25255 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 87 |
| Escherichia coli BW25113 | 0.29 | b2952 | yggT | predicted inner membrane protein (NCBI) | 0.36 | b0839 | dacC | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.29 | OHPLBJKB_00764 | | hypothetical protein | 0.36 | OHPLBJKB_02871 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 73 |
| Escherichia coli ECRC100 | 0.29 | OKFHMN_19250 | yggT | osmotic shock tolerance protein YggT | 0.35 | OKFHMN_06040 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 80 |
| Escherichia coli ECOR38 | 0.29 | HEPCGN_18555 | yggT | osmotic shock tolerance protein YggT | 0.35 | HEPCGN_01990 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 87 |
| Escherichia coli ECRC62 | 0.29 | BNILDI_09700 | yggT | osmotic shock tolerance protein YggT | 0.35 | BNILDI_20670 | dacC | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Dechlorosoma suillum PS | 0.29 | Dsui_0601 | | putative integral membrane protein | 0.48 | Dsui_0899 | | D-alanyl-D-alanine carboxypeptidase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF3055 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.32 | GFF744 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 78 |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_2340 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.36 | Pf1N1B4_2696 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | — | — |
| Acidovorax sp. GW101-3H11 | 0.28 | Ac3H11_1537 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.42 | Ac3H11_2142 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | — | — |
| Shewanella oneidensis MR-1 | 0.28 | SO3355 | | conserved hypothetical protein (NCBI ptt file) | 0.35 | SO1164 | dacA-1 | D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) | — | — |
| Variovorax sp. SCN45 | 0.28 | GFF3880 | | Cell division integral membrane protein, YggT and half-length relatives | 0.43 | GFF3627 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 127 |
| Marinobacter adhaerens HP15 | 0.28 | HP15_286 | | protein of unknown function YGGT | 0.39 | HP15_608 | | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_0282 | | Predicted integral membrane protein | 0.39 | Psest_0516 | | D-alanyl-D-alanine carboxypeptidase | — | — |
| Variovorax sp. OAS795 | 0.28 | ABID97_RS08415 | | YggT family protein | 0.43 | ABID97_RS00695 | | D-alanyl-D-alanine carboxypeptidase family protein | low | > 91 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_21420 | | YggT family protein | 0.33 | IAI46_13850 | | serine-type D-Ala-D-Ala carboxypeptidase DacD | low | > 86 |
| Rahnella sp. WP5 | 0.28 | EX31_RS02695 | | YggT family protein | 0.34 | EX31_RS09695 | | D-alanyl-D-alanine carboxypeptidase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.27 | LU632_RS05455 | | YggT family protein | 0.32 | LU632_RS16390 | dacA | D-alanyl-D-alanine carboxypeptidase DacA | low | > 74 |
| Dickeya dianthicola ME23 | 0.27 | DZA65_RS18445 | | YggT family protein | 0.34 | DZA65_RS09745 | | D-alanyl-D-alanine carboxypeptidase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.27 | HGI48_RS17355 | | YggT family protein | 0.35 | HGI48_RS09435 | | serine hydrolase | low | > 71 |
| Dickeya dadantii 3937 | 0.27 | DDA3937_RS17310 | | YggT family protein | 0.34 | DDA3937_RS09420 | | serine hydrolase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.27 | OH686_10985 | | YggT-like protein | 0.36 | OH686_09300 | | D-alanyl-D-alanine carboxypeptidase | low | > 80 |
| Shewanella amazonensis SB2B | 0.27 | Sama_2479 | | protein of unknown function YGGT (RefSeq) | 0.34 | Sama_2592 | | Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.27 | Shew_1135 | | protein of unknown function YGGT (RefSeq) | 0.34 | Shew_2939 | | Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_0475 | | Protein of unknown function YGGT | 0.36 | Psyr_4361 | | penicillin-binding protein 6, Serine peptidase, MEROPS family S11 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_0475 | | Protein of unknown function YGGT | 0.36 | Psyr_4361 | | penicillin-binding protein 6, Serine peptidase, MEROPS family S11 | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.27 | HSERO_RS01900 | | hypothetical protein | 0.49 | HSERO_RS21530 | | cytochrome C550 | — | — |
| Shewanella sp. ANA-3 | 0.26 | Shewana3_1192 | | protein of unknown function YGGT (RefSeq) | 0.35 | Shewana3_0991 | | penicillin-binding protein 6 (RefSeq) | low | > 73 |
| Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS28380 | | YggT family protein | 0.37 | PFLU_RS26635 | | D-alanyl-D-alanine carboxypeptidase | 0.40 | 5 |
| Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS28380 | | YggT family protein | 0.37 | PFLU_RS26635 | | D-alanyl-D-alanine carboxypeptidase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_4599 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.36 | Pf6N2E2_5001 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_13415 | | hypothetical protein | 0.37 | AO356_15330 | | D-alanyl-D-alanine carboxypeptidase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.25 | PS417_26735 | | membrane protein | 0.37 | PS417_24705 | | D-alanyl-D-alanine carboxypeptidase | — | — |
| Pseudomonas putida KT2440 | 0.25 | PP_5096 | | putative factor involved in shape determination | 0.36 | PP_4803 | | D-alanyl-D-alanine carboxypeptidase | low | > 96 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_04244 | | hypothetical protein | 0.37 | PFR28_03864 | | D-alanyl-D-alanine carboxypeptidase DacC | 0.27 | 61 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_1009 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.36 | PfGW456L13_1364 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.22 | GFF4919 | | Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) | 0.42 | GFF1806 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | — | — |
| Acinetobacter radioresistens SK82 | 0.16 | MPMX26_00573 | | hypothetical protein | 0.36 | MPMX26_01051 | | D-alanyl-D-alanine carboxypeptidase DacA | low | > 36 |
| Kangiella aquimarina DSM 16071 | 0.15 | B158DRAFT_0198 | | Predicted integral membrane protein | 0.39 | B158DRAFT_0079 | | D-alanyl-D-alanine carboxypeptidase | — | — |
Not shown: 0 genomes with orthologs for QEN71_RS03230 only; 18 genomes with orthologs for QEN71_RS01300 only