Conservation of cofitness between Psyr_4369 and Psyr_4852 in Pseudomonas syringae pv. syringae B728a

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.0 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.92 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.00 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.96 1
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.94 AO353_08510 3-phosphoglycerate dehydrogenase 0.65 35
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15290 gamma-glutamyl phosphate reductase 0.94 AO356_10300 3-phosphoglycerate dehydrogenase low > 104
Pseudomonas sp. RS175 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase 0.94 PFR28_04842 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.94 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.95 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Pseudomonas putida KT2440 0.85 PP_4811 Gamma-glutamyl phosphate reductase 0.93 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase low > 96
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens SBW25 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase — —
Pseudomonas simiae WCS417 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.95 PS417_27040 3-phosphoglycerate dehydrogenase 0.67 8
Pseudomonas stutzeri RCH2 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.89 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas sp. S08-1 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.90 OH686_11280 D-3-phosphoglycerate dehydrogenase low > 80
Marinobacter adhaerens HP15 0.70 HP15_601 gamma-glutamyl phosphate reductase 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Acinetobacter radioresistens SK82 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.69 MPMX26_02773 D-3-phosphoglycerate dehydrogenase low > 36
Castellaniella sp019104865 MT123 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 79
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase low > 128
Variovorax sp. SCN45 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.78 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 90
Variovorax sp. OAS795 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI) 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) — —
Azospirillum sp. SherDot2 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.60 MPMX19_00753 D-3-phosphoglycerate dehydrogenase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase 0.59 AZOBR_RS10940 3-phosphoglycerate dehydrogenase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.59 ABIE40_RS30040 phosphoglycerate dehydrogenase low > 107
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.67 LRK54_RS03185 phosphoglycerate dehydrogenase 0.75 30
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.67 LRK55_RS02935 phosphoglycerate dehydrogenase low > 63
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.68 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.85 57
Lysobacter sp. OAE881 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.68 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.81 74
Klebsiella michiganensis M5al 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.68 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.80 37
Escherichia coli Nissle 1917 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.67 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.96 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.67 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase low > 73
Escherichia coli ECRC62 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.67 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.93 53
Escherichia coli ECRC102 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.67 NIAGMN_17225 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC100 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.67 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.97 7
Escherichia coli ECOR27 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.67 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.99 1
Escherichia coli ECRC101 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.67 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.74 71
Escherichia coli ECOR38 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.67 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.89 48
Escherichia coli BL21 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.67 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.95 3
Escherichia coli ECRC98 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.67 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.88 24
Escherichia coli ECRC99 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.67 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Escherichia coli BW25113 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.67 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.84 55
Escherichia fergusonii Becca 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase 0.67 EFB2_00990 D-3-phosphoglycerate dehydrogenase low > 86
Enterobacter sp. TBS_079 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.67 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.90 30
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.67 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Dickeya dadantii 3937 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.65 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.65 69
Shewanella sp. ANA-3 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.69 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.67 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.49 9
Shewanella loihica PV-4 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.69 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 60
Rahnella sp. WP5 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.66 EX31_RS21470 phosphoglycerate dehydrogenase 0.85 78
Dickeya dianthicola ME23 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.65 DZA65_RS19540 phosphoglycerate dehydrogenase low > 75
Serratia liquefaciens MT49 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.67 IAI46_20900 phosphoglycerate dehydrogenase 0.66 47
Pantoea sp. MT58 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.66 IAI47_03725 phosphoglycerate dehydrogenase 0.89 38
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.65 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases low > 40
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.66 OKGIIK_10055 serA phosphoglycerate dehydrogenase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.65 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.80 18
Erwinia tracheiphila SCR3 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.67 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.85 5
Bosea sp. OAE506 0.40 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase — —
Bifidobacterium breve UCC2003 0.40 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase 0.44 BBR_RS16970 phosphoglycerate dehydrogenase 0.59 17
Dickeya dianthicola 67-19 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.65 HGI48_RS18400 phosphoglycerate dehydrogenase low > 71
Pectobacterium carotovorum WPP14 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.65 HER17_RS02725 phosphoglycerate dehydrogenase 0.86 71
Shewanella oneidensis MR-1 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.69 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.89 56
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.64 CSW01_12555 phosphoglycerate dehydrogenase low > 62
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.88 57

Not shown: 35 genomes with orthologs for Psyr_4369 only; 0 genomes with orthologs for Psyr_4852 only