Conservation of cofitness between Psyr_4754 and Psyr_4623 in Pseudomonas syringae pv. syringae B728a

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.0 Psyr_4623 Aminoglycoside phosphotransferase 0.29 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.00 Psyr_4623 Aminoglycoside phosphotransferase 0.36 78
Pseudomonas stutzeri RCH2 0.73 Psest_0255 RNA methyltransferase, RsmD family 0.70 Psest_3664 Predicted phosphotransferase related to Ser/Thr protein kinases — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.82 Pf6N2E2_4809 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 103
Pseudomonas sp. S08-1 0.72 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.65 OH686_15060 Phosphotransferase low > 80
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.68 Pf1N1B4_2532 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases — —
Pseudomonas sp. RS175 0.71 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.82 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase 0.26 74
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.82 AO356_14355 aminoglycoside phosphotransferase 0.36 23
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.82 AO353_07295 aminoglycoside phosphotransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.83 PFLU_RS27445 phosphotransferase low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.83 PFLU_RS27445 phosphotransferase low > 109
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.82 PfGW456L13_1204 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 87
Pseudomonas simiae WCS417 0.70 PS417_26825 16S rRNA methyltransferase 0.81 PS417_25790 aminoglycoside phosphotransferase — —
Pseudomonas putida KT2440 0.68 PP_5114 putative adenine methyltransferase 0.75 PP_0405 conserved protein of unknown function 0.58 11
Marinobacter adhaerens HP15 0.46 HP15_3491 conserved hypothetical protein 0.40 HP15_3282 aminoglycoside phosphotransferase low > 73
Shewanella sp. ANA-3 0.46 Shewana3_3973 putative methyltransferase (RefSeq) 0.33 Shewana3_3205 aminoglycoside phosphotransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.44 Shew_3607 putative methyltransferase (RefSeq) 0.33 Shew_0883 aminoglycoside phosphotransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.43 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) 0.33 SO3635 hypothetical phosphotransferase (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.36 OKGIIK_09975 Aminoglycoside phosphotransferase low > 52
Shewanella amazonensis SB2B 0.42 Sama_3469 hypothetical protein (RefSeq) 0.31 Sama_2815 phosphotransferase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19990 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.38 ABZR86_RS09500 phosphotransferase low > 74
Rhodanobacter denitrificans MT42 0.42 LRK55_RS13080 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.37 LRK55_RS02855 phosphotransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS13340 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.37 LRK54_RS03105 phosphotransferase low > 59
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) 0.35 B158DRAFT_0792 Predicted phosphotransferase related to Ser/Thr protein kinases low > 40
Acinetobacter radioresistens SK82 0.36 MPMX26_02312 Ribosomal RNA small subunit methyltransferase D 0.29 MPMX26_01212 N-acetylmuramate/N-acetylglucosamine kinase low > 36
Dechlorosoma suillum PS 0.36 Dsui_1027 RNA methyltransferase, RsmD family 0.47 Dsui_1588 aminoglycoside phosphotransferase low > 51
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS02815 methyltransferase 0.40 BPHYT_RS03285 aminoglycoside phosphotransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.41 H281DRAFT_04636 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.43 QEN71_RS02110 phosphotransferase low > 153
Paraburkholderia graminis OAS925 0.33 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase 0.41 ABIE53_000796 aminoglycoside/choline kinase family phosphotransferase low > 113
Castellaniella sp019104865 MT123 0.32 ABCV34_RS10145 RsmD family RNA methyltransferase 0.39 ABCV34_RS09505 phosphotransferase low > 48
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS20695 methyltransferase 0.41 HSERO_RS03520 aminoglycoside phosphotransferase low > 78
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS01990 methyltransferase 0.46 RR42_RS02765 aminoglycoside phosphotransferase 0.29 88
Caulobacter crescentus NA1000 0.29 CCNA_00227 methyltransferase 0.19 CCNA_03649 Ser/Thr kinase-related phosphotransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00227 methyltransferase 0.19 CCNA_03649 Ser/Thr kinase-related phosphotransferase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.43 GFF2463 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 90
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.50 RPSI07_RS21480 aminoglycoside phosphotransferase low > 81
Ralstonia solanacearum UW163 0.28 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.49 UW163_RS01850 aminoglycoside phosphotransferase — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.49 RALBFv3_RS11735 aminoglycoside phosphotransferase low > 76
Ralstonia solanacearum GMI1000 0.28 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.50 RS_RS02560 aminoglycoside phosphotransferase low > 80
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.50 ABZR87_RS07690 aminoglycoside phosphotransferase family protein low > 80
Phaeobacter inhibens DSM 17395 0.25 PGA1_c29260 ribosomal RNA small subunit methyltransferase D 0.17 PGA1_c35340 putative phosphotransferase low > 62
Rhodospirillum rubrum S1H 0.24 Rru_A0653 hypothetical protein (NCBI) 0.24 Rru_A3437 Aminoglycoside phosphotransferase (NCBI) — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_0115 putative methyltransferase (RefSeq) 0.17 Dshi_3435 aminoglycoside phosphotransferase (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS04215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.15 A4249_RS11275 phosphotransferase low > 48
Magnetospirillum magneticum AMB-1 0.23 AMB_RS20860 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.21 AMB_RS21475 aminoglycoside phosphotransferase — —

Not shown: 38 genomes with orthologs for Psyr_4754 only; 5 genomes with orthologs for Psyr_4623 only