| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0657 | | Drug resistance transporter Bcr/CflA subfamily | 1.0 | Psyr_4384 | | Multi antimicrobial extrusion protein MatE | 0.35 | 2 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0657 | | Drug resistance transporter Bcr/CflA subfamily | 1.00 | Psyr_4384 | | Multi antimicrobial extrusion protein MatE | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_3484 | | Multidrug resistance transporter, Bcr/CflA family | 0.73 | Pf6N2E2_3500 | | DNA-damage-inducible protein F | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_21 | | Multidrug resistance transporter, Bcr/CflA family | 0.75 | PfGW456L13_40 | | DNA-damage-inducible protein F | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.77 | Pf1N1B4_1259 | | Multidrug resistance transporter, Bcr/CflA family | 0.74 | Pf1N1B4_1292 | | DNA-damage-inducible protein F | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.77 | AO353_06140 | | MFS transporter | 0.71 | AO353_13735 | | MATE family efflux transporter | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.77 | AO356_08050 | | MFS transporter | 0.72 | AO356_08140 | | MATE family efflux transporter | low | > 104 |
| Pseudomonas putida KT2440 | 0.77 | PP_0589 | | Bcr/CflA family multidrug resistance transporter | 0.69 | PP_0569 | | MATE efflux family protein | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS03255 | | multidrug effflux MFS transporter | 0.69 | PFLU_RS03090 | | MATE family efflux transporter | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS03255 | | multidrug effflux MFS transporter | 0.69 | PFLU_RS03090 | | MATE family efflux transporter | low | > 109 |
| Pseudomonas simiae WCS417 | 0.76 | PS417_03175 | | major facilitator transporter | 0.72 | PS417_03010 | | XRE family transcriptional regulator | low | > 88 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_05247 | | Bicyclomycin resistance protein | 0.69 | PFR28_05231 | | DNA damage-inducible protein F | low | > 88 |
| Pseudomonas sp. S08-1 | 0.66 | OH686_07365 | | Multidrug resistance transporter, Bcr/CflA family | 0.57 | OH686_07530 | | MATE efflux family protein | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.64 | Psest_0741 | | drug resistance transporter, Bcr/CflA subfamily | 0.67 | Psest_3364 | | putative efflux protein, MATE family | low | > 67 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS28940 | | Bcr/CflA family drug resistance efflux transporter | 0.31 | RR42_RS09395 | | multidrug transporter MatE | low | > 128 |
| Marinobacter adhaerens HP15 | 0.38 | HP15_26 | | drug resistance transporter, Bcr/CflA family protein | 0.39 | HP15_3770 | | MATE efflux family protein | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS13775 | | MFS transporter | 0.30 | RPSI07_RS01180 | | MATE family efflux transporter | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.36 | RS_RS10900 | | Bcr/CflA family drug resistance efflux transporter | 0.30 | RS_RS18520 | | MATE family efflux transporter | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS15340 | | multidrug effflux MFS transporter | 0.32 | ABZR87_RS22695 | | MATE family efflux transporter | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS00225 | | multidrug effflux MFS transporter | 0.57 | ABZR86_RS00490 | | MATE family efflux transporter | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS03315 | | Bcr/CflA family multidrug efflux MFS transporter | 0.32 | QEN71_RS04895 | | MATE family efflux transporter | low | > 153 |
| Serratia liquefaciens MT49 | 0.27 | IAI46_17340 | | Bcr/CflA family multidrug efflux MFS transporter | 0.35 | IAI46_23000 | | MATE family efflux transporter DinF | low | > 86 |
| Rahnella sp. WP5 | 0.27 | EX31_RS23035 | | multidrug effflux MFS transporter | 0.35 | EX31_RS11850 | | MATE family efflux transporter DinF | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.26 | CSW01_08215 | | Bcr/CflA family drug resistance efflux transporter | 0.39 | CSW01_00480 | | MATE family efflux transporter | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS15365 | | Bcr/CflA family drug resistance efflux transporter | 0.30 | BPHYT_RS14080 | | multidrug transporter MatE | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_04016 | | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein | 0.29 | H281DRAFT_04426 | | multidrug resistance protein, MATE family | low | > 103 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS19805 | | Bcr/CflA family multidrug efflux MFS transporter | 0.33 | BWI76_RS01880 | | MATE family efflux transporter | low | > 92 |
| Pantoea sp. MT58 | 0.25 | IAI47_06590 | | Bcr/CflA family multidrug efflux MFS transporter | 0.33 | IAI47_17885 | | MATE family efflux transporter DinF | low | > 76 |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_03148 | | Bicyclomycin resistance protein | 0.33 | MPMX20_00260 | | DNA damage-inducible protein F | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF3754 | | MFS family multidrug transport protein, bicyclomycin resistance protein | 0.34 | GFF1413 | | DNA-damage-inducible protein F | low | > 78 |
| Escherichia coli ECRC100 | 0.24 | OKFHMN_23365 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | OKFHMN_13060 | dinF | MATE family efflux transporter DinF | low | > 80 |
| Phocaeicola dorei CL03T12C01 | 0.24 | ABI39_RS16630 | | multidrug effflux MFS transporter | 0.31 | ABI39_RS09485 | | MATE family efflux transporter | low | > 72 |
| Escherichia coli ECRC101 | 0.24 | MCAODC_14415 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | MCAODC_03560 | dinF | MATE family efflux transporter DinF | low | > 87 |
| Escherichia coli ECRC99 | 0.24 | KEDOAH_04820 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | KEDOAH_15100 | dinF | MATE family efflux transporter DinF | — | — |
| Escherichia coli ECRC98 | 0.24 | JDDGAC_27325 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | JDDGAC_16685 | dinF | MATE family efflux transporter DinF | low | > 86 |
| Escherichia coli ECRC102 | 0.24 | NIAGMN_21130 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | NIAGMN_10810 | dinF | MATE family efflux transporter DinF | — | — |
| Escherichia coli ECOR38 | 0.24 | HEPCGN_22630 | bcr | multidrug efflux MFS transporter Bcr | 0.33 | HEPCGN_11580 | dinF | MATE family efflux transporter DinF | low | > 87 |
| Escherichia fergusonii Becca | 0.24 | EFB2_01674 | | Bicyclomycin resistance protein | 0.34 | EFB2_04559 | | DNA damage-inducible protein F | low | > 86 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS12755 | | multidrug efflux MFS transporter Bcr | 0.34 | ECOLIN_RS23340 | | MATE family efflux transporter DinF | low | > 55 |
| Escherichia coli BW25113 | 0.24 | b2182 | bcr | bicyclomycin/multidrug efflux system (NCBI) | 0.34 | b4044 | dinF | DNA-damage-inducible SOS response protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.24 | ECD_02112 | | bicyclomycin/cysteine/sulfonamide efflux transporter | 0.34 | ECD_03916 | | oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein | low | > 61 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_0379 | | drug resistance transporter, Bcr/CflA subfamily | 0.32 | EX28DRAFT_4268 | | putative efflux protein, MATE family | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_01527 | | Bicyclomycin resistance protein | 0.34 | OHPLBJKB_03999 | | DNA damage-inducible protein F | low | > 73 |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_14940 | bcr | multidrug efflux MFS transporter Bcr | 0.34 | NOLOHH_05215 | dinF | MATE family efflux transporter DinF | low | > 75 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_13860 | bcr | multidrug efflux MFS transporter Bcr | 0.34 | BNILDI_06305 | dinF | MATE family efflux transporter DinF | low | > 75 |
| Rhizobium sp. OAE497 | 0.23 | ABIE40_RS09565 | | multidrug effflux MFS transporter | 0.26 | ABIE40_RS02425 | | MATE family efflux transporter | low | > 107 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0826 | | drug resistance transporter, Bcr/CflA subfamily | 0.38 | B158DRAFT_0674 | | putative efflux protein, MATE family | low | > 40 |
| Bacteroides stercoris CC31F | 0.22 | HMPREF1181_RS11860 | | multidrug effflux MFS transporter | 0.30 | HMPREF1181_RS09420 | | MATE family efflux transporter | low | > 56 |
| Shewanella loihica PV-4 | 0.22 | Shew_1777 | | Bcr/CflA subfamily drug resistance transporter (RefSeq) | 0.33 | Shew_0107 | | MATE efflux family protein (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.21 | Sama_3448 | | drug resistance transporter, Bcr/CflA family protein (RefSeq) | 0.37 | Sama_3501 | | DNA-damage-inducible protein F (RefSeq) | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.20 | TX73_018225 | | multidrug effflux MFS transporter | 0.26 | TX73_004125 | | MATE family efflux transporter | low | > 86 |
| Shewanella sp. ANA-3 | 0.20 | Shewana3_2062 | | inner membrane transport protein YdhC (RefSeq) | 0.32 | Shewana3_4001 | | MATE efflux family protein (RefSeq) | low | > 73 |
| Phaeobacter inhibens DSM 17395 | 0.20 | PGA1_c21620 | | putative bicyclomycin resistance protein | 0.32 | PGA1_c12130 | | DNA-damage-inducible protein F | low | > 62 |
| Shewanella oneidensis MR-1 | 0.19 | SO2373 | | drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) | 0.34 | SO4617 | dinF | DNA-damage-inducible protein F (NCBI ptt file) | low | > 76 |
| Sinorhizobium meliloti 1021 | 0.18 | SMc03825 | | transporter | 0.25 | SMc02244 | | transmembrane protein | low | > 103 |
| Agrobacterium fabrum C58 | 0.18 | Atu2666 | | MFS permease | 0.22 | Atu5428 | | DNA-damage-inducible protein F | low | > 89 |
| Dinoroseobacter shibae DFL-12 | 0.17 | Dshi_0717 | | drug resistance transporter, Bcr/CflA subfamily (RefSeq) | 0.33 | Dshi_0845 | | MATE efflux family protein (RefSeq) | low | > 64 |
| Sphingomonas koreensis DSMZ 15582 | 0.15 | Ga0059261_2714 | | drug resistance transporter, Bcr/CflA subfamily | 0.24 | Ga0059261_1394 | | putative efflux protein, MATE family | low | > 68 |
| Alteromonas macleodii MIT1002 | 0.13 | MIT1002_04046 | | Sulfonamide resistance protein | 0.32 | MIT1002_04023 | | DNA-damage-inducible protein F | low | > 70 |
Not shown: 27 genomes with orthologs for Psyr_0657 only; 5 genomes with orthologs for Psyr_4384 only