Conservation of cofitness between Pf1N1B4_3494 and Pf1N1B4_4002 in Pseudomonas fluorescens FW300-N1B4

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3494 Flavoprotein WrbA 1.0 Pf1N1B4_4002 Inner membrane component of tripartite multidrug resistance system 0.26 18
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_02765 NAD(P)H-quinone oxidoreductase 0.95 AO353_27840 multidrug resistance protein B low > 101
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_2023 Flavoprotein WrbA 0.89 PfGW456L13_2606 Inner membrane component of tripartite multidrug resistance system low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5714 Flavoprotein WrbA 0.94 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_19015 NAD(P)H-quinone oxidoreductase 0.96 AO356_01025 multidrug resistance protein B low > 104
Pseudomonas sp. RS175 0.91 PFR28_03233 NAD(P)H dehydrogenase (quinone) 0.96 PFR28_02747 Multidrug export protein EmrB low > 88
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.94 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.94 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Pseudomonas simiae WCS417 0.88 PS417_16400 NAD(P)H-quinone oxidoreductase 0.94 PS417_16910 multidrug resistance protein B low > 88
Pseudomonas putida KT2440 0.85 PP_1644 NAD(P)H dehydrogenase (quinone) 0.88 PP_3548 multidrug efflux transport system - permease subunit low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_3703 Flavodoxin/nitric oxide synthase 0.86 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_3703 Flavodoxin/nitric oxide synthase 0.86 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Paraburkholderia graminis OAS925 0.64 ABIE53_002923 NAD(P)H dehydrogenase (quinone) 0.48 ABIE53_000311 DHA2 family multidrug resistance protein low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS13740 NAD(P)H quinone oxidoreductase 0.49 BPHYT_RS19670 DSBA oxidoreductase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04482 NAD(P)H dehydrogenase (quinone) 0.48 H281DRAFT_02341 MFS transporter, DHA2 family, multidrug resistance protein low > 103
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS13830 NAD(P)H:quinone oxidoreductase 0.46 ABZR87_RS11225 DHA2 family efflux MFS transporter permease subunit low > 80
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS22085 NAD(P)H:quinone oxidoreductase 0.65 ABZR86_RS14765 DHA2 family efflux MFS transporter permease subunit low > 74
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS16550 NAD(P)H quinone oxidoreductase 0.44 HSERO_RS13575 DSBA oxidoreductase low > 78
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS01890 NAD(P)H:quinone oxidoreductase 0.45 RALBFv3_RS15695 MFS transporter low > 76
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS06445 NAD(P)H-quinone oxidoreductase 0.44 RR42_RS12830 multidrug resistance protein B low > 128
Ralstonia solanacearum PSI07 0.60 RPSI07_RS15600 NAD(P)H:quinone oxidoreductase 0.45 RPSI07_RS17660 MFS transporter low > 81
Ralstonia solanacearum GMI1000 0.60 RS_RS07845 NAD(P)H:quinone oxidoreductase 0.45 RS_RS06475 MFS transporter low > 80
Lysobacter sp. OAE881 0.59 ABIE51_RS05630 NAD(P)H:quinone oxidoreductase 0.62 ABIE51_RS07705 DHA2 family efflux MFS transporter permease subunit low > 62
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.4188.1 Trp repressor binding protein 0.61 Xcc-8004.3524.1 Inner membrane component of tripartite multidrug resistance system low > 74
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS05180 NAD(P)H:quinone oxidoreductase 0.46 QEN71_RS23085 DHA2 family efflux MFS transporter permease subunit low > 153
Acinetobacter radioresistens SK82 0.57 MPMX26_02675 NAD(P)H dehydrogenase (quinone) 0.38 MPMX26_02394 Multidrug export protein EmrB low > 36
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_10635 wrbA NAD(P)H:quinone oxidoreductase 0.65 OKGIIK_14290 emrB MFS transporter low > 52
Rhodanobacter denitrificans MT42 0.53 LRK55_RS03495 NAD(P)H:quinone oxidoreductase 0.66 LRK55_RS07520 DHA2 family efflux MFS transporter permease subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS03745 NAD(P)H:quinone oxidoreductase 0.66 LRK54_RS07790 DHA2 family efflux MFS transporter permease subunit low > 59
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_10795 NAD(P)H:quinone oxidoreductase 0.38 CSW01_07075 MFS transporter low > 62
Rhodospirillum rubrum S1H 0.36 Rru_A0373 flavodoxin/nitric oxide synthase (NCBI) 0.45 Rru_A0858 Drug resistance transporter EmrB/QacA subfamily (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.35 TX73_004690 NAD(P)H:quinone oxidoreductase 0.42 TX73_019160 DHA2 family efflux MFS transporter permease subunit low > 86
Azospirillum sp. SherDot2 0.34 MPMX19_05003 NAD(P)H dehydrogenase (quinone) 0.28 MPMX19_05353 Fatty acid resistance protein FarB low > 112
Rhizobium sp. OAE497 0.34 ABIE40_RS08165 NAD(P)H:quinone oxidoreductase type IV 0.28 ABIE40_RS21925 DHA2 family efflux MFS transporter permease subunit low > 107
Serratia liquefaciens MT49 0.33 IAI46_08995 NAD(P)H:quinone oxidoreductase 0.48 IAI46_20005 multidrug efflux MFS transporter permease subunit EmrB low > 86
Escherichia coli ECRC100 0.31 OKFHMN_04655 wrbA NAD(P)H:quinone oxidoreductase 0.48 OKFHMN_20775 emrB multidrug efflux MFS transporter permease subunit EmrB low > 80
Escherichia coli ECRC101 0.31 MCAODC_24040 wrbA NAD(P)H:quinone oxidoreductase 0.48 MCAODC_11300 emrB multidrug efflux MFS transporter permease subunit EmrB low > 87
Escherichia coli ECRC98 0.31 JDDGAC_08265 wrbA NAD(P)H:quinone oxidoreductase 0.48 JDDGAC_24440 emrB multidrug efflux MFS transporter permease subunit EmrB low > 86
Escherichia coli ECRC99 0.31 KEDOAH_23090 wrbA NAD(P)H:quinone oxidoreductase 0.48 KEDOAH_07360 emrB multidrug efflux MFS transporter permease subunit EmrB — —
Klebsiella michiganensis M5al 0.30 BWI76_RS10740 NAD(P)H:quinone oxidoreductase 0.49 BWI76_RS22100 multidrug effux MFS transporter subunit EmrB low > 92
Escherichia coli BW25113 0.30 b1004 wrbA TrpR binding protein WrbA (NCBI) 0.48 b2686 emrB multidrug efflux system protein (NCBI) low > 76
Escherichia coli ECOR27 0.30 NOLOHH_21555 wrbA NAD(P)H:quinone oxidoreductase 0.48 NOLOHH_12615 emrB multidrug efflux MFS transporter permease subunit EmrB 0.45 70
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3702 NAD(P)H:quinone oxidoreductase, type IV 0.27 Ga0059261_4005 drug resistance transporter, EmrB/QacA subfamily low > 68
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02663 NAD(P)H dehydrogenase (quinone) 0.48 OHPLBJKB_01047 Multidrug export protein EmrB low > 73
Escherichia coli ECRC62 0.30 BNILDI_19720 wrbA NAD(P)H:quinone oxidoreductase 0.48 BNILDI_11175 emrB multidrug efflux MFS transporter permease subunit EmrB low > 75
Escherichia coli Nissle 1917 0.30 ECOLIN_RS05235 NAD(P)H:quinone oxidoreductase 0.48 ECOLIN_RS14970 multidrug efflux MFS transporter permease subunit EmrB — —
Escherichia coli ECOR38 0.30 HEPCGN_23485 wrbA NAD(P)H:quinone oxidoreductase 0.47 HEPCGN_19970 emrB multidrug efflux MFS transporter permease subunit EmrB low > 87
Escherichia coli BL21 0.30 ECD_01007 NAD(P)H:quinone oxidoreductase 0.48 ECD_02541 multidrug efflux system protein low > 61
Escherichia fergusonii Becca 0.30 EFB2_03076 NAD(P)H dehydrogenase (quinone) 0.47 EFB2_01242 Multidrug export protein EmrB low > 86
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1923 NAD(P)H:quinone oxidoreductase, type IV 0.49 EX28DRAFT_2769 drug resistance transporter, EmrB/QacA subfamily low > 76
Enterobacter sp. TBS_079 0.30 MPMX20_01689 NAD(P)H dehydrogenase (quinone) 0.49 MPMX20_03564 Multidrug export protein EmrB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3296 Flavoprotein WrbA 0.49 GFF1593 Multidrug resistance protein B low > 78
Erwinia tracheiphila SCR3 0.30 LU632_RS10140 wrbA NAD(P)H:quinone oxidoreductase 0.32 LU632_RS09490 DHA2 family efflux MFS transporter permease subunit low > 74
Rahnella sp. WP5 0.29 EX31_RS10720 NAD(P)H:quinone oxidoreductase 0.50 EX31_RS13660 multidrug efflux MFS transporter permease subunit EmrB low > 89
Pantoea sp. MT58 0.29 IAI47_12550 NAD(P)H:quinone oxidoreductase 0.50 IAI47_04495 multidrug efflux MFS transporter permease subunit EmrB low > 76
Escherichia coli ECRC102 0.28 NIAGMN_23195 wrbA NAD(P)H:quinone oxidoreductase 0.48 NIAGMN_18545 emrB multidrug efflux MFS transporter permease subunit EmrB — —
Variovorax sp. OAS795 0.26 ABID97_RS18920 NAD(P)H:quinone oxidoreductase 0.44 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit low > 91
Castellaniella sp019104865 MT123 0.24 ABCV34_RS15000 NAD(P)H:quinone oxidoreductase 0.56 ABCV34_RS13880 DHA2 family efflux MFS transporter permease subunit low > 48

Not shown: 12 genomes with orthologs for Pf1N1B4_3494 only; 12 genomes with orthologs for Pf1N1B4_4002 only