| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_1783 | | dTDP-glucose pyrophosphorylase | 1.0 | PP_4693 | | RNA polymerase-binding transcription factor DksA | 0.40 | 16 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_0924 | | Glucose-1-phosphate thymidylyltransferase | 0.76 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_0924 | | Glucose-1-phosphate thymidylyltransferase | 0.76 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.78 | QEN71_RS25750 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.33 | QEN71_RS00340 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS20605 | | glucose-1-phosphate thymidylyltransferase | 0.35 | RPSI07_RS23720 | | RNA polymerase-binding protein DksA | low | > 81 |
| Ralstonia solanacearum UW163 | 0.77 | UW163_RS00910 | | glucose-1-phosphate thymidylyltransferase | 0.33 | UW163_RS03935 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.77 | RALBFv3_RS12655 | | glucose-1-phosphate thymidylyltransferase | 0.33 | RALBFv3_RS09645 | | RNA polymerase-binding protein DksA | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS03440 | | glucose-1-phosphate thymidylyltransferase | 0.33 | RS_RS00230 | | RNA polymerase-binding protein DksA | 0.50 | 8 |
| Castellaniella sp019104865 MT123 | 0.76 | ABCV34_RS13015 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.33 | ABCV34_RS13420 | | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECOR38 | 0.76 | HEPCGN_03115 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | HEPCGN_08295 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli BL21 | 0.76 | ECD_01945 | | glucose-1-phosphate thymidylyltransferase | 0.64 | ECD_00144 | | transcriptional regulator of rRNA transcription; DnaK suppressor protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS08655 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.35 | ABZR87_RS05100 | | RNA polymerase-binding protein DksA | low | > 80 |
| Escherichia fergusonii Becca | 0.76 | EFB2_01815 | | Glucose-1-phosphate thymidylyltransferase 1 | 0.64 | EFB2_03899 | | RNA polymerase-binding transcription factor DksA | low | > 86 |
| Escherichia coli BW25113 | 0.75 | b2039 | rfbA | glucose-1-phosphate thymidylyltransferase (NCBI) | 0.64 | b0145 | dksA | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3889 | | Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) | 0.64 | GFF87 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_03012 | | Glucose-1-phosphate thymidylyltransferase 1 | 0.64 | MPMX20_00831 | | RNA polymerase-binding transcription factor DksA | low | > 85 |
| Dechlorosoma suillum PS | 0.74 | Dsui_1950 | | glucose-1-phosphate thymidylyltransferase, short form | 0.54 | Dsui_2717 | | RNA polymerase-binding protein DksA | — | — |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_03560 | | Glucose-1-phosphate thymidylyltransferase 1 | 0.59 | MIT1002_03690 | | DnaK suppressor protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.71 | Pf1N1B4_341 | | Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) | 0.76 | Pf1N1B4_2862 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.70 | CCNA_01199 | | glucose-1-phosphate thymidylyltransferase | 0.37 | CCNA_02663 | | DnaK suppressor protein DksA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.70 | CCNA_01199 | | glucose-1-phosphate thymidylyltransferase | 0.37 | CCNA_02663 | | DnaK suppressor protein DksA | 0.61 | 17 |
| Erwinia tracheiphila SCR3 | 0.70 | LU632_RS08860 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | LU632_RS20080 | dksA | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.70 | PfGW456L13_2199 | | Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) | 0.78 | PfGW456L13_1528 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Azospirillum sp. SherDot2 | 0.69 | MPMX19_06727 | | Glucose-1-phosphate thymidylyltransferase 1 | 0.36 | MPMX19_01492 | | RNA polymerase-binding transcription factor DksA | — | — |
| Bosea sp. OAE506 | 0.69 | ABIE41_RS02865 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.34 | ABIE41_RS13460 | | RNA polymerase-binding protein DksA | low | > 77 |
| Rhodospirillum rubrum S1H | 0.69 | Rru_B0048 | | Glucose-1-phosphate thymidylyltransferase, long form (NCBI) | 0.36 | Rru_A2847 | | Transcriptional regulators, TraR/DksA family (NCBI) | — | — |
| Pseudomonas simiae WCS417 | 0.68 | PS417_01325 | | glucose-1-phosphate thymidylyltransferase | 0.78 | PS417_23875 | | molecular chaperone DnaK | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_14375 | | glucose-1-phosphate thymidylyltransferase | 0.71 | OH686_17280 | | RNA polymerase-binding protein DksA | — | — |
| Shewanella sp. ANA-3 | 0.68 | Shewana3_1380 | | glucose-1-phosphate thymidylyltransferase (RefSeq) | 0.60 | Shewana3_3404 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.68 | Shew_1402 | | glucose-1-phosphate thymidylyltransferase (RefSeq) | 0.63 | Shew_3129 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.68 | TX73_000620 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.36 | TX73_020255 | | RNA polymerase-binding protein DksA | low | > 86 |
| Pseudomonas sp. RS175 | 0.67 | PFR28_04893 | | Glucose-1-phosphate thymidylyltransferase 2 | 0.77 | PFR28_03714 | | RNA polymerase-binding transcription factor DksA | — | — |
| Rhizobium sp. OAE497 | 0.67 | ABIE40_RS08660 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.40 | ABIE40_RS10345 | | RNA polymerase-binding protein DksA | low | > 107 |
| Azospirillum brasilense Sp245 | 0.67 | AZOBR_RS33425 | | glucose-1-phosphate thymidylyltransferase | 0.37 | AZOBR_RS11245 | | molecular chaperone DnaK | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_01661 | | Glucose-1-phosphate thymidylyltransferase 2 | 0.64 | OHPLBJKB_03517 | | RNA polymerase-binding transcription factor DksA | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.67 | Psest_4263 | | glucose-1-phosphate thymidylyltransferase, short form | 0.69 | Psest_1003 | | RNA polymerase-binding protein DksA | — | — |
| Serratia liquefaciens MT49 | 0.67 | IAI46_00615 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.65 | IAI46_21210 | | RNA polymerase-binding protein DksA | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS01420 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.77 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS01420 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.77 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.67 | Pf6N2E2_3879 | | Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) | 0.68 | Pf6N2E2_5160 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_0527 | | glucose-1-phosphate thymidylyltransferase, short form | 0.64 | EX28DRAFT_3734 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.66 | AO356_10045 | | glucose-1-phosphate thymidylyltransferase | 0.77 | AO356_16095 | | molecular chaperone DnaK | — | — |
| Dickeya dianthicola ME23 | 0.66 | DZA65_RS07115 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | DZA65_RS17135 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_11880 | | glucose-1-phosphate thymidylyltransferase | 0.76 | AO353_14420 | | molecular chaperone DnaK | — | — |
| Marinobacter adhaerens HP15 | 0.66 | HP15_p187g50 | | glucose-1-phosphate thymidylyltransferase 1 | 0.60 | HP15_332 | | transcriptional regulator, TraR/DksA family | — | — |
| Agrobacterium fabrum C58 | 0.66 | Atu4615 | | glucose-1-phosphate thymidylyltransferase | 0.38 | Atu1359 | | dnaK deletion suppressor protein | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS14595 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.65 | HER17_RS05580 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dadantii 3937 | 0.66 | DDA3937_RS06740 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | DDA3937_RS15935 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS06760 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | HGI48_RS16050 | | RNA polymerase-binding protein DksA | low | > 71 |
| Pantoea sp. MT58 | 0.65 | IAI47_18495 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.63 | IAI47_15635 | | RNA polymerase-binding protein DksA | low | > 76 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS19060 | | glucose-1-phosphate thymidylyltransferase | 0.64 | BWI76_RS05015 | | transcriptional regulator | low | > 92 |
| Rahnella sp. WP5 | 0.65 | EX31_RS11520 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | EX31_RS03250 | | RNA polymerase-binding protein DksA | — | — |
| Shewanella amazonensis SB2B | 0.65 | Sama_2240 | | glucose-1-phosphate thymidylyltransferase (RefSeq) | 0.63 | Sama_0780 | | TraR/DksA family transcriptional regulator (RefSeq) | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.65 | PGA1_65p00220 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.35 | PGA1_c11040 | | dnaK suppressor protein DksA | — | — |
| Escherichia coli ECRC62 | 0.64 | BNILDI_04835 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | BNILDI_08980 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_06690 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | NOLOHH_02690 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS21750 | | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | ECOLIN_RS00815 | | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC101 | 0.64 | OKFHMN_14555 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | OKFHMN_10345 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_12310 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | NIAGMN_08195 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC101 | 0.64 | MCAODC_05060 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | MCAODC_00860 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_13595 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | KEDOAH_17810 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_18180 | rfbA | glucose-1-phosphate thymidylyltransferase RfbA | 0.64 | JDDGAC_13940 | dksA | RNA polymerase-binding protein DksA | — | — |
| Shewanella oneidensis MR-1 | 0.64 | SO3186 | rfbA | glucose-1-phosphate-thymidylyltransferase (NCBI ptt file) | 0.60 | SO0874 | dksA | DnaK suppressor protein (NCBI ptt file) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_4118 | | glucose-1-phosphate thymidylyltransferase (RefSeq) | 0.36 | Dshi_1884 | | transcriptional regulator, TraR/DksA family (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.60 | SM_b21324 | | glucose-1-phosphate thymidylyltransferase | 0.38 | SMc00469 | | DnaK suppressor protein | — | — |
| Magnetospirillum magneticum AMB-1 | 0.59 | AMB_RS00300 | | glucose-1-phosphate thymidylyltransferase | 0.36 | AMB_RS19350 | | RNA polymerase-binding protein DksA | — | — |
Not shown: 29 genomes with orthologs for PP_1783 only; 6 genomes with orthologs for PP_4693 only