Conservation of cofitness between PP_5155 and PP_4680 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 1.0 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.81 2
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.88 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.86 7
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.90 Psyr_0846 acetolactate synthase, large subunit 0.85 23
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.90 Psyr_0846 acetolactate synthase, large subunit 0.90 9
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_08510 3-phosphoglycerate dehydrogenase 0.89 AO353_14495 acetolactate synthase 3 catalytic subunit 0.82 21
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.88 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.82 16
Pseudomonas sp. S08-1 0.92 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.88 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.88 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas sp. RS175 0.91 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.90 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.58 10
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS28695 phosphoglycerate dehydrogenase 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25 0.91 PFLU_RS28695 phosphoglycerate dehydrogenase 0.89 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_10300 3-phosphoglycerate dehydrogenase 0.89 AO356_16170 acetolactate synthase 3 catalytic subunit 0.89 11
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.89 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.82 16
Pseudomonas simiae WCS417 0.91 PS417_27040 3-phosphoglycerate dehydrogenase 0.89 PS417_23810 acetolactate synthase 3 catalytic subunit 0.86 4
Variovorax sp. OAS795 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase 0.59 ABID97_RS14885 acetolactate synthase 3 catalytic subunit
Acidovorax sp. GW101-3H11 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.59 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) low > 79
Marinobacter adhaerens HP15 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.75 HP15_531 acetolactate synthase, large subunit, biosynthetic type
Variovorax sp. SCN45 0.77 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.59 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.61 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Acinetobacter radioresistens SK82 0.71 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.70 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit low > 36
Alteromonas macleodii MIT1002 0.69 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.65 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.83 39
Shewanella amazonensis SB2B 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.70 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) low > 62
Shewanella oneidensis MR-1 0.68 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.70 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.68 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.67 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.68 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.69 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) 0.81 62
Klebsiella michiganensis M5al 0.66 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.65 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.34 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit 0.96 3
Escherichia coli ECRC62 0.66 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.67 BNILDI_08565 ilvI acetolactate synthase 3 large subunit
Serratia liquefaciens MT49 0.66 IAI46_20900 phosphoglycerate dehydrogenase 0.69 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Escherichia coli ECOR38 0.66 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.67 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.67 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit low > 73
Escherichia coli ECRC99 0.66 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.67 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit
Escherichia coli BW25113 0.66 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.67 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.66 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.67 ECOLIN_RS00415 acetolactate synthase 3 large subunit low > 52
Escherichia coli ECRC101 0.66 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.67 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECOR27 0.66 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.67 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit low > 57
Escherichia coli ECRC101 0.66 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.67 MCAODC_01215 ilvI acetolactate synthase 3 large subunit
Escherichia fergusonii Becca 0.66 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.67 EFB2_03969 Acetolactate synthase isozyme 3 large subunit low > 86
Escherichia coli ECRC98 0.66 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.67 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC102 0.66 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.67 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit
Escherichia coli BL21 0.66 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.67 ECD_00079 acetolactate synthase 3 large subunit low > 60
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.66 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6)
Enterobacter sp. TBS_079 0.65 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.66 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Erwinia tracheiphila SCR3 0.65 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.68 LU632_RS02885 ilvI acetolactate synthase 3 large subunit low > 74
Pantoea sp. MT58 0.65 IAI47_03725 phosphoglycerate dehydrogenase 0.67 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.63 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS03185 phosphoglycerate dehydrogenase 0.32 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit 0.76 16
Rhodanobacter denitrificans MT42 0.65 LRK55_RS02935 phosphoglycerate dehydrogenase 0.32 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.31 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit low > 52
Rahnella sp. WP5 0.65 EX31_RS21470 phosphoglycerate dehydrogenase 0.69 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Dickeya dianthicola ME23 0.64 DZA65_RS19540 phosphoglycerate dehydrogenase 0.68 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.78 30
Dickeya dadantii 3937 0.64 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.69 DDA3937_RS18105 acetolactate synthase 3 large subunit low > 74
Dickeya dianthicola 67-19 0.64 HGI48_RS18400 phosphoglycerate dehydrogenase 0.68 HGI48_RS18040 acetolactate synthase 3 large subunit low > 71
Pectobacterium carotovorum WPP14 0.64 HER17_RS02725 phosphoglycerate dehydrogenase 0.69 HER17_RS03095 acetolactate synthase 3 large subunit low > 75
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_12555 phosphoglycerate dehydrogenase 0.66 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Lysobacter sp. OAE881 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.37 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.88 38
Azospirillum sp. SherDot2 0.60 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.51 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Rhizobium sp. OAE497 0.59 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.49 ABIE40_RS11495 acetolactate synthase 3 large subunit low > 107
Azospirillum brasilense Sp245 0.59 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.50 AZOBR_RS06560 acetolactate synthase
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.49 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI)
Bosea sp. OAE506 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.51 ABIE41_RS12890 acetolactate synthase 3 large subunit
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.59 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.61 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Bifidobacterium breve UCC2003 0.44 BBR_RS16970 phosphoglycerate dehydrogenase 0.38 BBR_RS12350 acetolactate synthase large subunit low > 34

Not shown: 1 genomes with orthologs for PP_5155 only; 37 genomes with orthologs for PP_4680 only