Conservation of cofitness between PP_5035 and PP_4679 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5035 Histidine utilization repressor 1.0 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.43 15
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0366 transcriptional regulator, GntR family 1.00 Psyr_0847 acetolactate synthase, small subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0366 transcriptional regulator, GntR family 1.00 Psyr_0847 acetolactate synthase, small subunit low > 86
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_329 Histidine utilization repressor 0.98 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) low > 87
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1590 Histidine utilization repressor 0.98 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) 0.37 75
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_12240 histidine utilization repressor 0.98 AO353_14500 acetolactate synthase 3 regulatory subunit low > 101
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_09640 histidine utilization repressor 0.98 AO356_16175 acetolactate synthase 3 regulatory subunit 0.39 41
Pseudomonas sp. RS175 0.87 PFR28_04963 HTH-type transcriptional repressor NagR 0.98 PFR28_03698 Acetolactate synthase isozyme 3 small subunit 0.25 40
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3807 Histidine utilization repressor 0.98 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) low > 103
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01765 histidine utilization repressor 0.98 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01765 histidine utilization repressor 0.98 PFLU_RS25645 acetolactate synthase small subunit 0.39 11
Pseudomonas simiae WCS417 0.84 PS417_01710 histidine utilization repressor 0.98 PS417_23805 acetolactate synthase 3 regulatory subunit 0.58 4
Enterobacter sp. TBS_079 0.63 MPMX20_01398 HTH-type transcriptional repressor NagR 0.68 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit low > 85
Dickeya dianthicola ME23 0.63 DZA65_RS15850 histidine utilization repressor 0.68 DZA65_RS19180 acetolactate synthase small subunit low > 75
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.67 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) low > 76
Dickeya dianthicola 67-19 0.63 HGI48_RS15100 histidine utilization repressor 0.68 HGI48_RS18035 acetolactate synthase small subunit low > 71
Klebsiella michiganensis M5al 0.63 BWI76_RS08730 histidine utilization repressor 0.68 BWI76_RS04700 acetolactate synthase small subunit low > 92
Dickeya dadantii 3937 0.62 DDA3937_RS15020 histidine utilization repressor 0.68 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Serratia liquefaciens MT49 0.62 IAI46_10615 histidine utilization repressor 0.70 IAI46_03380 acetolactate synthase small subunit low > 86
Pantoea sp. MT58 0.62 IAI47_13270 histidine utilization repressor 0.67 IAI47_15985 acetolactate synthase small subunit 0.61 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF665 Histidine utilization repressor 0.68 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Rahnella sp. WP5 0.60 EX31_RS06725 histidine utilization repressor 0.70 EX31_RS03660 acetolactate synthase small subunit low > 89
Rhizobium sp. OAE497 0.57 ABIE40_RS23900 histidine utilization repressor 0.40 ABIE40_RS11490 acetolactate synthase small subunit low > 107
Sinorhizobium meliloti 1021 0.57 SMc00674 histidine utilization repressor transcription regulator protein 0.40 SMc01430 acetolactate synthase 3 regulatory subunit low > 103
Variovorax sp. SCN45 0.47 GFF6410 Histidine utilization repressor 0.68 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS03415 histidine utilization repressor 0.69 ABID97_RS14890 acetolactate synthase small subunit low > 91
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16925 histidine utilization repressor 0.74 RR42_RS05440 acetolactate synthase
Shewanella loihica PV-4 0.46 Shew_3758 histidine utilization repressor (RefSeq) 0.69 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.46 Shewana3_0099 histidine utilization repressor (RefSeq) 0.66 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.45 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.66 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Shewanella amazonensis SB2B 0.45 Sama_0081 histidine utilization repressor (RefSeq) 0.66 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 62
Azospirillum sp. SherDot2 0.45 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.42 MPMX19_01775 Acetolactate synthase isozyme 3 small subunit
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2559 Histidine utilization repressor 0.71 Ac3H11_526 Acetolactate synthase small subunit (EC 2.2.1.6) low > 79
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS07755 histidine utilization repressor 0.73 QEN71_RS24220 acetolactate synthase small subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.73 H281DRAFT_04552 acetolactate synthase, small subunit low > 103
Rhodospirillum rubrum S1H 0.44 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.42 Rru_A0468 Acetolactate synthase, small subunit (NCBI) low > 58
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11905 histidine utilization repressor 0.73 RPSI07_RS14260 acetolactate synthase small subunit low > 81
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01035 histidine utilization repressor 0.74 ABZR87_RS14950 acetolactate synthase small subunit low > 80
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07560 histidine utilization repressor 0.74 BPHYT_RS06550 acetolactate synthase
Paraburkholderia graminis OAS925 0.43 ABIE53_001730 GntR family histidine utilization transcriptional repressor 0.74 ABIE53_001575 acetolactate synthase-1/3 small subunit low > 113
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05400 histidine utilization repressor 0.73 RALBFv3_RS03045 acetolactate synthase small subunit low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS08225 histidine utilization repressor 0.73 UW163_RS10680 acetolactate synthase small subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3591 Histidine utilization repressor 0.71 GFF4277 Acetolactate synthase small subunit (EC 2.2.1.6) low > 90
Ralstonia solanacearum GMI1000 0.42 RS_RS13260 histidine utilization repressor 0.73 RS_RS10415 acetolactate synthase small subunit low > 80
Pseudomonas sp. S08-1 0.41 OH686_16760 histidine utilization repressor 0.98 OH686_08125 acetolactate synthase, small subunit low > 80
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_06100 histidine utilization repressor 0.69 CSW01_12560 acetolactate synthase small subunit low > 62
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12825 histidine utilization repressor 0.66 ABCV34_RS01215 acetolactate synthase small subunit low > 48
Bosea sp. OAE506 0.34 ABIE41_RS23630 histidine utilization repressor 0.38 ABIE41_RS12905 acetolactate synthase small subunit
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01013 histidine utilization repressor 0.38 CCNA_02186 acetolactate synthase small subunit low > 67
Caulobacter crescentus NA1000 0.29 CCNA_01013 histidine utilization repressor 0.38 CCNA_02186 acetolactate synthase small subunit low > 66
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3966 Transcriptional regulators 0.45 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6) 0.57 44
Phaeobacter inhibens DSM 17395 0.18 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.41 PGA1_c20220 acetolactate synthase isozyme 3 small subunit low > 62

Not shown: 3 genomes with orthologs for PP_5035 only; 35 genomes with orthologs for PP_4679 only