Conservation of cofitness between PP_1426 and PP_2327 in Pseudomonas putida KT2440

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1426 L-aspartate oxidase 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.48 14
Pseudomonas fluorescens SBW25 0.90 PFLU_RS07225 L-aspartate oxidase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS07225 L-aspartate oxidase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_17620 L-aspartate oxidase 0.97 AO353_19060 CysB family transcriptional regulator 0.34 44
Pseudomonas simiae WCS417 0.90 PS417_07115 L-aspartate oxidase 0.96 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.49 21
Pseudomonas sp. RS175 0.89 PFR28_00689 L-aspartate oxidase 0.96 PFR28_00966 HTH-type transcriptional regulator CysB 0.50 6
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_3959 L-aspartate oxidase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.63 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_3959 L-aspartate oxidase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04580 L-aspartate oxidase 0.97 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas sp. S08-1 0.87 OH686_20040 L-aspartate oxidase 0.93 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3101 L-aspartate oxidase 0.91 Psest_2329 Transcriptional regulator 0.30 4
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.34 11
Marinobacter adhaerens HP15 0.72 HP15_774 L-aspartate oxidase 0.80 HP15_1854 transcriptional regulator, LysR family — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Shewanella amazonensis SB2B 0.67 Sama_0873 L-aspartate oxidase (RefSeq) 0.66 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12495 L-aspartate oxidase 0.70 CSW01_09545 HTH-type transcriptional regulator CysB — —
Shewanella oneidensis MR-1 0.66 SO1341 nadB L-aspartate oxidase (NCBI ptt file) 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.66 IAI46_19590 L-aspartate oxidase 0.68 IAI46_13965 HTH-type transcriptional regulator CysB — —
Shewanella sp. ANA-3 0.66 Shewana3_3033 L-aspartate oxidase (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella loihica PV-4 0.66 Shew_1047 L-aspartate oxidase (RefSeq) 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Dickeya dianthicola 67-19 0.66 HGI48_RS15855 L-aspartate oxidase 0.69 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS15770 L-aspartate oxidase 0.68 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS16935 L-aspartate oxidase 0.68 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.64 60
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03070 L-aspartate oxidase 0.48 QEN71_RS22570 CysB family HTH-type transcriptional regulator low > 153
Paraburkholderia graminis OAS925 0.65 ABIE53_003292 L-aspartate oxidase 0.49 ABIE53_001994 LysR family cys regulon transcriptional activator 0.31 45
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_04069 L-aspartate oxidase 0.49 H281DRAFT_00782 transcriptional regulator, LysR family low > 103
Pectobacterium carotovorum WPP14 0.65 HER17_RS05775 L-aspartate oxidase 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB 0.85 58
Pantoea sp. MT58 0.64 IAI47_04845 L-aspartate oxidase 0.67 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS21360 L-aspartate oxidase 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) 0.67 EX28DRAFT_0946 Transcriptional regulator — —
Enterobacter sp. TBS_079 0.64 MPMX20_03445 L-aspartate oxidase 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS12660 L-aspartate oxidase 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15640 L-aspartate oxidase 0.49 BPHYT_RS08810 CysB family transcriptional regulator low > 109
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS17010 L-aspartate oxidase 0.45 RR42_RS12245 transcriptional regulator low > 128
Dechlorosoma suillum PS 0.64 Dsui_2452 L-aspartate oxidase 0.52 Dsui_1988 transcriptional regulator — —
Rahnella sp. WP5 0.64 EX31_RS21795 L-aspartate oxidase 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB 0.73 8
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS04725 L-aspartate oxidase 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS08945 L-aspartate oxidase 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.64 RS_RS12285 L-aspartate oxidase 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2106 L-aspartate oxidase (EC 1.4.3.16) 0.68 GFF2712 Cys regulon transcriptional activator CysB — —
Acinetobacter radioresistens SK82 0.64 MPMX26_02162 L-aspartate oxidase 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR low > 36
Escherichia coli ECRC102 0.64 NIAGMN_19140 nadB L-aspartate oxidase 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC99 0.64 KEDOAH_06850 nadB L-aspartate oxidase 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.64 BNILDI_11845 nadB L-aspartate oxidase 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.64 OKFHMN_21370 nadB L-aspartate oxidase 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR27 0.64 NOLOHH_13045 nadB L-aspartate oxidase 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.64 JDDGAC_25035 nadB L-aspartate oxidase 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.64 MCAODC_11900 nadB L-aspartate oxidase 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BW25113 0.64 b2574 nadB L-aspartate oxidase (NCBI) 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia coli ECOR38 0.64 HEPCGN_20515 nadB L-aspartate oxidase 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS00345 L-aspartate oxidase 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator low > 80
Escherichia coli BL21 0.64 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_01133 L-aspartate oxidase 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli Nissle 1917 0.64 ECOLIN_RS14570 L-aspartate oxidase 0.67 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Escherichia fergusonii Becca 0.63 EFB2_01322 L-aspartate oxidase 0.67 EFB2_02652 HTH-type transcriptional regulator CysB — —
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS11085 L-aspartate oxidase 0.47 HSERO_RS08245 CysB family transcriptional regulator low > 78
Variovorax sp. SCN45 0.62 GFF2580 L-aspartate oxidase (EC 1.4.3.16) 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF1214 L-aspartate oxidase (EC 1.4.3.16) 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI low > 90
Alteromonas macleodii MIT1002 0.61 MIT1002_02720 L-aspartate oxidase 0.68 MIT1002_02005 Cys regulon transcriptional activator — —
Variovorax sp. OAS795 0.59 ABID97_RS07440 L-aspartate oxidase 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator low > 91
Acidovorax sp. GW101-3H11 0.57 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.56 54
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03690 L-aspartate oxidase 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator low > 48

Not shown: 28 genomes with orthologs for PP_1426 only; 7 genomes with orthologs for PP_2327 only