Conservation of cofitness between PP_2215 and PP_2216 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2215 acetyl-CoA acetyltransferase 1.0 PP_2216 short-chain acyl-CoA dehydrogenase 0.62 3
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_25685 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) 0.90 AO353_25680 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) (from data) 0.51 2
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_2982 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.89 PfGW456L13_2983 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.45 3
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.90 PFLU_RS14770 acyl-CoA dehydrogenase 0.62 6
Pseudomonas fluorescens SBW25 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.90 PFLU_RS14770 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4786 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.89 Pf1N1B4_4787 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) — —
Pseudomonas sp. RS175 0.84 PFR28_01882 Acetyl-CoA acetyltransferase 0.88 PFR28_01883 Acyl-CoA dehydrogenase 0.90 3
Pseudomonas simiae WCS417 0.84 PS417_13855 acetyl-CoA acetyltransferase 0.91 PS417_13850 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.25 2
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_1145 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.89 Pf6N2E2_1146 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_26350 acetyl-CoA acetyltransferase 0.89 AO356_26355 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.49 3
Pseudomonas stutzeri RCH2 0.76 Psest_2446 acetyl-CoA acetyltransferases 0.86 Psest_2445 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.46 2
Rhodopseudomonas palustris CGA009 0.75 TX73_011915 acetyl-CoA C-acetyltransferase 0.74 TX73_011920 acyl-CoA dehydrogenase family protein low > 86
Pseudomonas sp. S08-1 0.74 OH686_00870 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase 0.81 OH686_00875 Acyl-CoA dehydrogenase, short-chain specific low > 80
Magnetospirillum magneticum AMB-1 0.69 AMB_RS18210 acetyl-CoA C-acyltransferase 0.72 AMB_RS18215 acyl-CoA dehydrogenase low > 64
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS01125 acetyl-CoA C-acetyltransferase 0.65 QEN71_RS01115 acyl-CoA dehydrogenase family protein low > 153
Sinorhizobium meliloti 1021 0.67 SMa1450 thiolase 0.40 SM_b20753 acyl-CoA dehydrogenase low > 103
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_02089 acetyl-CoA C-acetyltransferase 0.66 H281DRAFT_02091 hypothetical protein low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_000590 acetyl-CoA C-acetyltransferase 0.66 ABIE53_000588 butyryl-CoA dehydrogenase low > 113
Azospirillum sp. SherDot2 0.66 MPMX19_03936 Acetyl-CoA acetyltransferase 0.74 MPMX19_03937 Acyl-CoA dehydrogenase low > 112
Rhizobium sp. OAE497 0.66 ABIE40_RS23180 acetyl-CoA C-acyltransferase 0.75 ABIE40_RS23185 acyl-CoA dehydrogenase family protein low > 107
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS02230 acetyl-CoA acetyltransferase 0.66 BPHYT_RS02220 butyryl-CoA dehydrogenase low > 109
Dechlorosoma suillum PS 0.65 Dsui_0976 acetyl-CoA acetyltransferase 0.65 Dsui_0977 acyl-CoA dehydrogenase low > 51
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS25380 acetyl-CoA acetyltransferase 0.64 RR42_RS00895 acyl-CoA dehydrogenase low > 128
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS10515 acetyl-CoA C-acyltransferase 0.63 RALBFv3_RS10505 butyryl-CoA dehydrogenase low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS03065 acetyl-CoA C-acyltransferase 0.63 UW163_RS03075 butyryl-CoA dehydrogenase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS01355 acetyl-CoA C-acyltransferase 0.61 RS_RS01345 butyryl-CoA dehydrogenase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF1723 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.65 GFF1721 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 90
Agrobacterium fabrum C58 0.63 Atu3475 acetyl-CoA C-acetyltransferase 0.75 Atu3474 acyl-CoA dehydrogenase 0.38 3
Acidovorax sp. GW101-3H11 0.63 Ac3H11_2994 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.65 Ac3H11_2996 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) (from data) 0.78 2
Rhodospirillum rubrum S1H 0.62 Rru_A1946 Acetyl-CoA C-acetyltransferase (NCBI) 0.38 Rru_A1835 Butyryl-CoA dehydrogenase (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_2511 acetyl-CoA acetyltransferases 0.72 B158DRAFT_2510 Acyl-CoA dehydrogenases 0.86 1
Variovorax sp. OAS795 0.60 ABID97_RS25195 acetyl-CoA C-acyltransferase 0.66 ABID97_RS25215 acyl-CoA dehydrogenase family protein low > 91
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS04635 acetyl-CoA acetyltransferase 0.66 HSERO_RS04640 butyryl-CoA dehydrogenase low > 78
Variovorax sp. SCN45 0.60 GFF1993 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.66 GFF1995 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) low > 127
Azospirillum brasilense Sp245 0.59 AZOBR_RS28180 acetyl-CoA acetyltransferase 0.71 AZOBR_RS22300 acyl-CoA dehydrogenase low > 97
Shewanella loihica PV-4 0.59 Shew_1667 acetyl-CoA acetyltransferase (RefSeq) 0.43 Shew_1669 butyryl-CoA dehydrogenase (RefSeq) 0.64 2
Shewanella amazonensis SB2B 0.59 Sama_1375 Acetyl-CoA C-acetyltransferase (RefSeq) 0.42 Sama_1377 butyryl-CoA dehydrogenase (RefSeq) 0.60 1
Castellaniella sp019104865 MT123 0.59 ABCV34_RS12360 acetyl-CoA C-acyltransferase 0.42 ABCV34_RS03995 acyl-CoA dehydrogenase family protein 0.98 9
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS10470 acetyl-CoA C-acyltransferase 0.40 A4249_RS03585 isobutyryl-CoA dehydrogenase 0.59 2
Caulobacter crescentus NA1000 0.59 CCNA_00938 acetyl-CoA acetyltransferase 0.41 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific 0.64 6
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_00938 acetyl-CoA acetyltransferase 0.41 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific low > 67
Marinobacter adhaerens HP15 0.58 HP15_1009 acyl-CoA thiolase 0.39 HP15_907 acyl-CoA dehydrogenase domain protein low > 73
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1483 acetyl-CoA acetyltransferases 0.38 Ga0059261_3793 Acyl-CoA dehydrogenases low > 68
Acinetobacter radioresistens SK82 0.58 MPMX26_02383 Acetyl-CoA acetyltransferase 0.71 MPMX26_01547 Acyl-CoA dehydrogenase — —
Alteromonas macleodii MIT1002 0.58 MIT1002_01671 Acetyl-CoA acetyltransferase 0.41 MIT1002_01978 Acyl-CoA dehydrogenase 0.45 36
Shewanella sp. ANA-3 0.57 Shewana3_2771 acetyl-CoA acetyltransferases (RefSeq) 0.44 Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) 0.86 4
Shewanella oneidensis MR-1 0.57 SO1677 atoB 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) 0.43 SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.84 1
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.3647.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.43 Xcc-8004.3378.1 hypothetical protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS06590 acetyl-CoA acetyltransferase 0.47 CA265_RS22715 acyl-CoA dehydrogenase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.46 ABZR88_RS08010 acetyl-CoA C-acyltransferase 0.45 ABZR88_RS17820 acyl-CoA dehydrogenase low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_3705 acetyl-CoA acetyltransferases 0.48 Echvi_1212 Acyl-CoA dehydrogenases low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_11830 acetyl-CoA acetyltransferase 0.46 CA264_17640 acyl-CoA dehydrogenase low > 74

Not shown: 11 genomes with orthologs for PP_2215 only; 17 genomes with orthologs for PP_2216 only