| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0958 | | phospholipid ABC transporter ATP-binding subunit | 1.0 | PP_1384 | | Probable efflux pump outer membrane protein TtgC | 0.49 | 9 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_05150 | | ABC transporter ATP-binding protein | 0.76 | AO353_17290 | | multidrug transporter | low | > 101 |
| Pseudomonas simiae WCS417 | 0.94 | PS417_04375 | | ABC transporter ATP-binding protein | 0.73 | PS417_06765 | | multidrug transporter | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.94 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.74 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.94 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.74 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_5008 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.75 | PfGW456L13_4582 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_4141 | | ABC transporter | 0.80 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Pseudomonas sp. S08-1 | 0.92 | OH686_08510 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.65 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_4141 | | ABC transporter | 0.80 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | 0.29 | 65 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_07005 | | ABC transporter ATP-binding protein | 0.74 | AO356_04885 | | multidrug transporter | low | > 104 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00179 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.74 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3260 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.74 | Pf6N2E2_2825 | | RND efflux system, outer membrane lipoprotein CmeC | 0.23 | 61 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1074 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.77 | Pf1N1B4_3245 | | RND efflux system, outer membrane lipoprotein, NodT family | — | — |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_3307 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.61 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.24 | 55 |
| Rahnella sp. WP5 | 0.68 | EX31_RS12435 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.46 | EX31_RS13330 | | efflux transporter outer membrane subunit | low | > 89 |
| Pantoea sp. MT58 | 0.64 | IAI47_17145 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.21 | IAI47_12395 | | efflux transporter outer membrane subunit | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02741 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.34 | MPMX26_00688 | | Outer membrane protein OprM | low | > 36 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS01565 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.34 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | low | > 74 |
| Shewanella oneidensis MR-1 | 0.62 | SO3954 | | ABC transporter, ATP-binding protein, putative (NCBI ptt file) | 0.19 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_0678 | | ABC transporter related (RefSeq) | 0.32 | Shewana3_4297 | | copper/silver efflux system outer membrane protein CusC (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.61 | IAI46_22430 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.45 | IAI46_16730 | | efflux transporter outer membrane subunit | low | > 86 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS01545 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.32 | DZA65_RS03600 | | efflux transporter outer membrane subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS01480 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | HGI48_RS14115 | | efflux transporter outer membrane subunit | low | > 71 |
| Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS18970 | | toluene ABC transporter ATP-binding protein | 0.48 | RR42_RS36970 | | RND transporter | low | > 128 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF1325 | | Methionine ABC transporter ATP-binding protein | 0.37 | GFF3841 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 90 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04101 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.33 | MPMX20_00056 | | Outer membrane protein OprM | low | > 85 |
| Dechlorosoma suillum PS | 0.59 | Dsui_1398 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.36 | Dsui_3183 | | efflux transporter, outer membrane factor lipoprotein, NodT family | — | — |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_3249 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.34 | EX28DRAFT_3935 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS25230 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.34 | BWI76_RS27700 | | multidrug transporter | low | > 92 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_4712 | | Methionine ABC transporter ATP-binding protein | 0.37 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 79 |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11885 | | ATP-binding cassette domain-containing protein | 0.49 | ABZR86_RS18290 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS02555 | | ABC transporter ATP-binding protein | 0.43 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | low | > 80 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_01760 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia fergusonii Becca | 0.58 | EFB2_00628 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.35 | EFB2_02632 | | putative efflux pump outer membrane protein TtgC | low | > 86 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_08495 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | MCAODC_15780 | tolC | multidrug transporter | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_09775 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 57 |
| Escherichia coli BL21 | 0.58 | ECD_03060 | | ABC transporter maintaining OM lipid asymmetry, ATP-binding protein | 0.34 | ECD_00533 | | copper/silver efflux system, outer membrane component | low | > 60 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_16850 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.36 | HEPCGN_25710 | tolC | multidrug transporter | low | > 85 |
| Escherichia coli BW25113 | 0.58 | b3195 | yrbF | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | 0.34 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_00505 | | putative phospholipid import ATP-binding protein MlaF | 0.34 | OHPLBJKB_03137 | | Cation efflux system protein CusC | low | > 73 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_21600 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | JDDGAC_05035 | tolC | multidrug transporter | — | — |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS18390 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_15735 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | NIAGMN_26660 | tolC | multidrug transporter | — | — |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_10175 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | KEDOAH_26285 | tolC | multidrug transporter | — | — |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_17975 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.35 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS14845 | | ABC transporter ATP-binding protein | 0.48 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | low | > 80 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS23215 | | ABC transporter ATP-binding protein | 0.40 | ABID97_RS00330 | | efflux transporter outer membrane subunit | 0.47 | 29 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS10335 | | ABC transporter ATP-binding protein | 0.49 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 81 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF2939 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.41 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_05641 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | 0.44 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS27920 | | ABC transporter ATP-binding protein | 0.45 | QEN71_RS29860 | | efflux transporter outer membrane subunit | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS20400 | | toluene ABC transporter ATP-binding protein | 0.49 | HSERO_RS06820 | | multidrug transporter | — | — |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS17765 | | toluene ABC transporter ATP-binding protein | 0.45 | BPHYT_RS34590 | | multidrug transporter | low | > 109 |
| Variovorax sp. SCN45 | 0.55 | GFF5334 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.46 | GFF5991 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | low | > 127 |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS06900 | | ABC transporter ATP-binding protein | 0.47 | RALBFv3_RS19800 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | low | > 76 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS06715 | | ABC transporter ATP-binding protein | 0.47 | UW163_RS19375 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | — | — |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS01015 | | ABC transporter ATP-binding protein | 0.24 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS11180 | | ABC transporter ATP-binding protein | 0.37 | ABCV34_RS04220 | | efflux transporter outer membrane subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.5363.1 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.48 | Xcc-8004.1795.1 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 74 |
| Desulfovibrio vulgaris Miyazaki F | 0.34 | DvMF_0853 | | ABC transporter related (RefSeq) | 0.26 | DvMF_2162 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | 0.29 | 49 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.29 | BT3839 | | ABC transporter ATP-binding protein (NCBI ptt file) | 0.20 | BT0306 | | outer membrane protein oprM precursor (NCBI ptt file) | low | > 81 |
Not shown: 17 genomes with orthologs for PP_0958 only; 10 genomes with orthologs for PP_1384 only