Conservation of cofitness between PP_5155 and PP_0967 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 1.0 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.78 10
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.83 PfGW456L13_4999 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.57 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.83 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.86 20
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.83 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.86 17
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_08510 3-phosphoglycerate dehydrogenase 0.83 AO353_05105 histidinol-phosphate aminotransferase 0.60 66
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.85 Pf1N1B4_1065 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.43 75
Pseudomonas sp. S08-1 0.92 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.84 OH686_08465 histidinol-phosphate transaminase low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.83 Psest_3297 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) — —
Pseudomonas sp. RS175 0.91 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.82 PFR28_00188 Histidinol-phosphate aminotransferase low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS28695 phosphoglycerate dehydrogenase 0.85 PFLU_RS04475 histidinol-phosphate transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS28695 phosphoglycerate dehydrogenase 0.85 PFLU_RS04475 histidinol-phosphate transaminase low > 109
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_10300 3-phosphoglycerate dehydrogenase 0.82 AO356_06960 histidinol-phosphate aminotransferase 0.65 49
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.83 Pf6N2E2_3251 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.61 44
Pseudomonas simiae WCS417 0.91 PS417_27040 3-phosphoglycerate dehydrogenase 0.84 PS417_04425 histidinol-phosphate aminotransferase low > 88
Variovorax sp. OAS795 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase 0.56 ABID97_RS08770 histidinol-phosphate transaminase low > 91
Acidovorax sp. GW101-3H11 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.13 Ac3H11_4729 histidinol-phosphate transaminase (EC 2.6.1.9) (from data) — —
Marinobacter adhaerens HP15 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.71 HP15_2427 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) — —
Variovorax sp. SCN45 0.77 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.57 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.17 GFF1493 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 90
Acinetobacter radioresistens SK82 0.71 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.61 MPMX26_02586 Histidinol-phosphate aminotransferase low > 36
Alteromonas macleodii MIT1002 0.69 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.16 MIT1002_03353 Histidinol-phosphate aminotransferase low > 70
Shewanella amazonensis SB2B 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.14 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.86 35
Shewanella oneidensis MR-1 0.68 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.16 SO2072 hisC histidinol-phosphate aminotransferase (NCBI ptt file) 0.88 20
Shewanella loihica PV-4 0.68 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.20 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.96 31
Shewanella sp. ANA-3 0.68 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.15 Shewana3_1852 histidinol phosphate aminotransferase (RefSeq) 0.88 21
Klebsiella michiganensis M5al 0.66 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.17 BWI76_RS18930 histidinol-phosphate transaminase 0.77 44
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.18 ABZR86_RS06725 histidinol-phosphate transaminase 0.93 22
Escherichia coli ECRC98 0.66 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.17 JDDGAC_28620 hisC histidinol-phosphate transaminase — —
Serratia liquefaciens MT49 0.66 IAI46_20900 phosphoglycerate dehydrogenase 0.17 IAI46_08205 histidinol-phosphate transaminase 0.61 77
Escherichia coli BW25113 0.66 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.17 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 0.86 25
Escherichia coli ECRC102 0.66 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.17 NIAGMN_22455 hisC histidinol-phosphate transaminase — —
Escherichia coli ECRC101 0.66 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.17 OKFHMN_24510 hisC histidinol-phosphate transaminase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.17 ECOLIN_RS11950 histidinol-phosphate transaminase — —
Escherichia fergusonii Becca 0.66 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.17 EFB2_01835 Histidinol-phosphate aminotransferase low > 86
Escherichia coli ECRC62 0.66 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.16 BNILDI_14735 hisC histidinol-phosphate transaminase — —
Escherichia coli ECOR27 0.66 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.17 NOLOHH_15825 hisC histidinol-phosphate transaminase low > 57
Escherichia coli ECRC99 0.66 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.17 KEDOAH_03640 hisC histidinol-phosphate transaminase — —
Escherichia coli ECRC101 0.66 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.17 MCAODC_20430 hisC histidinol-phosphate transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.17 OHPLBJKB_01679 Histidinol-phosphate aminotransferase low > 73
Escherichia coli ECOR38 0.66 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.17 HEPCGN_03215 hisC histidinol-phosphate transaminase low > 85
Escherichia coli BL21 0.66 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.17 ECD_01923 histidinol-phosphate aminotransferase 0.64 38
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.17 EX28DRAFT_0538 histidinol-phosphate aminotransferase — —
Enterobacter sp. TBS_079 0.65 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.17 MPMX20_03003 Histidinol-phosphate aminotransferase 0.90 10
Pantoea sp. MT58 0.65 IAI47_03725 phosphoglycerate dehydrogenase 0.16 IAI47_07085 histidinol-phosphate transaminase 0.90 16
Erwinia tracheiphila SCR3 0.65 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.16 LU632_RS08940 hisC histidinol-phosphate transaminase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.17 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 78
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS03185 phosphoglycerate dehydrogenase 0.19 LRK54_RS01600 histidinol-phosphate transaminase 0.73 24
Rhodanobacter denitrificans MT42 0.65 LRK55_RS02935 phosphoglycerate dehydrogenase 0.18 LRK55_RS01380 histidinol-phosphate transaminase low > 63
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.18 OKGIIK_04955 hisC histidinol-phosphate transaminase low > 52
Rahnella sp. WP5 0.65 EX31_RS21470 phosphoglycerate dehydrogenase 0.20 EX31_RS06765 histidinol-phosphate transaminase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.19 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.81 15
Dickeya dadantii 3937 0.64 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.14 DDA3937_RS09730 histidinol-phosphate transaminase 0.79 37
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.21 B158DRAFT_2325 histidinol-phosphate aminotransferase low > 40
Dickeya dianthicola ME23 0.64 DZA65_RS19540 phosphoglycerate dehydrogenase 0.13 DZA65_RS10050 histidinol-phosphate transaminase low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS18400 phosphoglycerate dehydrogenase 0.13 HGI48_RS09740 histidinol-phosphate transaminase low > 71
Pectobacterium carotovorum WPP14 0.64 HER17_RS02725 phosphoglycerate dehydrogenase 0.17 HER17_RS12235 histidinol-phosphate transaminase 0.90 18
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_12555 phosphoglycerate dehydrogenase 0.15 CSW01_05755 histidinol-phosphate transaminase low > 62
Lysobacter sp. OAE881 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.21 ABIE51_RS12140 histidinol-phosphate transaminase 0.87 44
Azospirillum sp. SherDot2 0.60 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.19 MPMX19_04389 Histidinol-phosphate aminotransferase — —
Rhizobium sp. OAE497 0.59 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.21 ABIE40_RS17595 histidinol-phosphate transaminase low > 107
Azospirillum brasilense Sp245 0.59 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.21 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) — —
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.19 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.57 ABCV34_RS02645 histidinol-phosphate transaminase — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.21 RR42_RS04465 aspartate aminotransferase low > 128
Bifidobacterium breve UCC2003 0.44 BBR_RS16970 phosphoglycerate dehydrogenase 0.16 BBR_RS17050 histidinol-phosphate transaminase low > 34

Not shown: 1 genomes with orthologs for PP_5155 only; 38 genomes with orthologs for PP_0967 only