Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_5203 | | 5-formyltetrahydrofolate cyclo-ligase | 1.0 | PP_0083 | | tryptophan synthase beta chain | 0.43 | 18 |
Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.86 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.86 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_2225 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.86 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.69 | 14 |
Pseudomonas simiae WCS417 | 0.74 | PS417_27305 | | 5-formyltetrahydrofolate cyclo-ligase | 0.86 | PS417_00185 | | tryptophan synthase subunit beta | low | > 88 |
Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_08780 | | 5-formyltetrahydrofolate cyclo-ligase | 0.86 | AO353_10710 | | tryptophan synthase subunit beta | 0.76 | 20 |
Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.91 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.91 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_892 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.86 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.50 | 33 |
Pseudomonas sp. RS175 | 0.69 | PFR28_04325 | | 5-formyltetrahydrofolate cyclo-ligase | 0.86 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.69 | AO356_12990 | | 5-formyltetrahydrofolate cyclo-ligase | 0.85 | AO356_10915 | | tryptophan synthase subunit beta | 0.58 | 32 |
Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_4476 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.85 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.39 | 76 |
Pseudomonas stutzeri RCH2 | 0.65 | Psest_0170 | | 5,10-methenyltetrahydrofolate synthetase | 0.83 | Psest_0063 | | tryptophan synthase, beta subunit | low | > 67 |
Pseudomonas sp. S08-1 | 0.56 | OH686_11225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.85 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
Marinobacter adhaerens HP15 | 0.41 | HP15_3211 | | 5-formyltetrahydrofolate cyclo-ligase | 0.63 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_12545 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | CSW01_05930 | | tryptophan synthase subunit beta | low | > 62 |
Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS19095 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
Serratia liquefaciens MT49 | 0.35 | IAI46_20895 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 86 |
Escherichia coli ECRC101 | 0.35 | MCAODC_10005 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC99 | 0.35 | KEDOAH_08655 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECOR27 | 0.35 | NOLOHH_11395 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 57 |
Escherichia coli ECRC102 | 0.35 | NIAGMN_17250 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC62 | 0.35 | BNILDI_09930 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC98 | 0.35 | JDDGAC_23125 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC101 | 0.35 | OKFHMN_19485 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia fergusonii Becca | 0.35 | EFB2_00991 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
Escherichia coli ECOR38 | 0.34 | HEPCGN_18775 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 85 |
Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS16205 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 52 |
Enterobacter sp. TBS_079 | 0.34 | MPMX20_03770 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
Shewanella sp. ANA-3 | 0.34 | Shewana3_3506 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.51 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.34 | SO0774 | | 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) | 0.51 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | 0.68 | 61 |
Escherichia coli BW25113 | 0.33 | b2912 | ygfA | putative ligase (VIMSS) | 0.52 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.33 | ECD_02743 | | 5-formyltetrahydrofolate cyclo-ligase family protein | 0.52 | ECD_01235 | | tryptophan synthase, beta subunit | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.33 | OHPLBJKB_00804 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 73 |
Rahnella sp. WP5 | 0.32 | EX31_RS21480 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
Erwinia tracheiphila SCR3 | 0.32 | LU632_RS05860 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | — | — |
Pantoea sp. MT58 | 0.32 | IAI47_03730 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
Klebsiella michiganensis M5al | 0.32 | BWI76_RS23915 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
Shewanella loihica PV-4 | 0.31 | Shew_3069 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.52 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | 0.37 | 37 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.31 | GFF3012 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.53 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
Rhodanobacter denitrificans MT42 | 0.29 | LRK55_RS11395 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | LRK55_RS01465 | | tryptophan synthase subunit beta | low | > 63 |
Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_12225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.65 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.28 | LRK54_RS11670 | | 5-formyltetrahydrofolate cyclo-ligase | 0.65 | LRK54_RS01685 | | tryptophan synthase subunit beta | low | > 59 |
Kangiella aquimarina DSM 16071 | 0.25 | B158DRAFT_0528 | | 5-formyltetrahydrofolate cyclo-ligase | 0.49 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
Xanthomonas campestris pv. campestris strain 8004 | 0.24 | Xcc-8004.1138.1 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.63 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 74 |
Dyella japonica UNC79MFTsu3.2 | 0.23 | ABZR86_RS11995 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | ABZR86_RS08000 | | tryptophan synthase subunit beta | low | > 74 |
Lysobacter sp. OAE881 | 0.23 | ABIE51_RS17355 | | 5-formyltetrahydrofolate cyclo-ligase | 0.64 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
Acinetobacter radioresistens SK82 | 0.21 | MPMX26_02298 | | 5-formyltetrahydrofolate cyclo-ligase | 0.63 | MPMX26_02617 | | Tryptophan synthase beta chain | low | > 36 |
Agrobacterium fabrum C58 | 0.20 | Atu3731 | | 5-formyltetrahydrofolate cyclo-ligase | 0.71 | Atu0018 | | tryptophan synthase beta subunit | — | — |
Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS04880 | | 5-formyltetrahydrofolate cyclo-ligase | 0.67 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
Caulobacter crescentus NA1000 | 0.19 | CCNA_03354 | | 5-formyltetrahydrofolate cyclo-ligase | 0.68 | CCNA_03658 | | tryptophan synthase beta chain | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.19 | CCNA_03354 | | 5-formyltetrahydrofolate cyclo-ligase | 0.68 | CCNA_03658 | | tryptophan synthase beta chain | low | > 67 |
Rhizobium sp. OAE497 | 0.19 | ABIE40_RS15645 | | 5-formyltetrahydrofolate cyclo-ligase | 0.72 | ABIE40_RS19335 | | tryptophan synthase subunit beta | — | — |
Sinorhizobium meliloti 1021 | 0.18 | SMc03974 | | hypothetical protein | 0.71 | SMc02766 | | tryptophan synthase subunit beta | low | > 103 |
Ralstonia solanacearum PSI07 | 0.18 | RPSI07_RS23505 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | RPSI07_RS14730 | | tryptophan synthase subunit beta | low | > 81 |
Magnetospirillum magneticum AMB-1 | 0.18 | AMB_RS16280 | | 5-formyltetrahydrofolate cyclo-ligase | 0.71 | AMB_RS20295 | | tryptophan synthase subunit beta | — | — |
Ralstonia solanacearum UW163 | 0.17 | UW163_RS03715 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS09865 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
Ralstonia solanacearum GMI1000 | 0.16 | RS_RS00450 | | 5-formyltetrahydrofolate cyclo-ligase | 0.66 | RS_RS09965 | | tryptophan synthase subunit beta | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.16 | RR42_RS01400 | | 5-formyltetrahydrofolate cyclo-ligase | 0.64 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
Dechlorosoma suillum PS | 0.14 | Dsui_0682 | | 5,10-methenyltetrahydrofolate synthetase | 0.65 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.13 | A4249_RS00800 | | 5-formyltetrahydrofolate cyclo-ligase | 0.65 | A4249_RS11330 | | tryptophan synthase subunit beta | — | — |
Not shown: 0 genomes with orthologs for PP_5203 only; 40 genomes with orthologs for PP_0083 only