Conservation of cofitness between PP_5203 and PP_0083 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5203 5-formyltetrahydrofolate cyclo-ligase 1.0 PP_0083 tryptophan synthase beta chain 0.43 18
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.86 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.86 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.86 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) 0.69 14
Pseudomonas simiae WCS417 0.74 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.86 PS417_00185 tryptophan synthase subunit beta low > 88
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.86 AO353_10710 tryptophan synthase subunit beta 0.76 20
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.91 Psyr_0034 tryptophan synthase, beta chain low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.91 Psyr_0034 tryptophan synthase, beta chain low > 86
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.86 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20) 0.50 33
Pseudomonas sp. RS175 0.69 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.86 PFR28_04715 Tryptophan synthase beta chain
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.85 AO356_10915 tryptophan synthase subunit beta 0.58 32
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.85 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20) 0.39 76
Pseudomonas stutzeri RCH2 0.65 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.83 Psest_0063 tryptophan synthase, beta subunit low > 67
Pseudomonas sp. S08-1 0.56 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.85 OH686_12425 tryptophan synthase, beta subunit low > 80
Marinobacter adhaerens HP15 0.41 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.63 HP15_1827 tryptophan synthase, beta subunit
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.52 CSW01_05930 tryptophan synthase subunit beta low > 62
Pectobacterium carotovorum WPP14 0.35 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.53 HER17_RS10935 tryptophan synthase subunit beta low > 75
Serratia liquefaciens MT49 0.35 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.52 IAI46_14040 tryptophan synthase subunit beta low > 86
Escherichia coli ECRC101 0.35 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 MCAODC_15595 trpB tryptophan synthase subunit beta
Escherichia coli ECRC99 0.35 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECOR27 0.35 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 NOLOHH_20330 trpB tryptophan synthase subunit beta low > 57
Escherichia coli ECRC102 0.35 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli ECRC62 0.35 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 BNILDI_18475 trpB tryptophan synthase subunit beta
Escherichia coli ECRC98 0.35 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 JDDGAC_05215 trpB tryptophan synthase subunit beta
Escherichia coli ECRC101 0.35 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 OKFHMN_02670 trpB tryptophan synthase subunit beta
Escherichia fergusonii Becca 0.35 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.53 EFB2_02665 Tryptophan synthase beta chain low > 86
Escherichia coli ECOR38 0.34 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 HEPCGN_25520 trpB tryptophan synthase subunit beta low > 85
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.52 ECOLIN_RS07600 tryptophan synthase subunit beta low > 52
Enterobacter sp. TBS_079 0.34 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.53 MPMX20_02513 Tryptophan synthase beta chain low > 85
Shewanella sp. ANA-3 0.34 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.51 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.51 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) 0.68 61
Escherichia coli BW25113 0.33 b2912 ygfA putative ligase (VIMSS) 0.52 b1261 trpB tryptophan synthase subunit beta (NCBI) low > 76
Escherichia coli BL21 0.33 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.52 ECD_01235 tryptophan synthase, beta subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.52 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Rahnella sp. WP5 0.32 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.52 EX31_RS09975 tryptophan synthase subunit beta low > 89
Erwinia tracheiphila SCR3 0.32 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.53 LU632_RS12770 trpB tryptophan synthase subunit beta
Pantoea sp. MT58 0.32 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.53 IAI47_09170 tryptophan synthase subunit beta low > 76
Klebsiella michiganensis M5al 0.32 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.53 BWI76_RS11845 tryptophan synthase subunit beta low > 92
Shewanella loihica PV-4 0.31 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.52 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.37 37
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.53 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) low > 78
Rhodanobacter denitrificans MT42 0.29 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.66 LRK55_RS01465 tryptophan synthase subunit beta low > 63
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.65 OKGIIK_04845 trpB tryptophan synthase subunit beta low > 52
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.65 LRK54_RS01685 tryptophan synthase subunit beta low > 59
Kangiella aquimarina DSM 16071 0.25 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase 0.49 B158DRAFT_2429 tryptophan synthase, beta subunit low > 40
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.63 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) low > 74
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.66 ABZR86_RS08000 tryptophan synthase subunit beta low > 74
Lysobacter sp. OAE881 0.23 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.64 ABIE51_RS08260 tryptophan synthase subunit beta low > 62
Acinetobacter radioresistens SK82 0.21 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase 0.63 MPMX26_02617 Tryptophan synthase beta chain low > 36
Agrobacterium fabrum C58 0.20 Atu3731 5-formyltetrahydrofolate cyclo-ligase 0.71 Atu0018 tryptophan synthase beta subunit
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase 0.67 ABZR87_RS14500 tryptophan synthase subunit beta low > 80
Caulobacter crescentus NA1000 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.68 CCNA_03658 tryptophan synthase beta chain low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.68 CCNA_03658 tryptophan synthase beta chain low > 67
Rhizobium sp. OAE497 0.19 ABIE40_RS15645 5-formyltetrahydrofolate cyclo-ligase 0.72 ABIE40_RS19335 tryptophan synthase subunit beta
Sinorhizobium meliloti 1021 0.18 SMc03974 hypothetical protein 0.71 SMc02766 tryptophan synthase subunit beta low > 103
Ralstonia solanacearum PSI07 0.18 RPSI07_RS23505 5-formyltetrahydrofolate cyclo-ligase 0.66 RPSI07_RS14730 tryptophan synthase subunit beta low > 81
Magnetospirillum magneticum AMB-1 0.18 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase 0.71 AMB_RS20295 tryptophan synthase subunit beta
Ralstonia solanacearum UW163 0.17 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase 0.66 UW163_RS11140 tryptophan synthase subunit beta
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase 0.66 RALBFv3_RS02585 tryptophan synthase subunit beta
Ralstonia solanacearum GMI1000 0.16 RS_RS00450 5-formyltetrahydrofolate cyclo-ligase 0.66 RS_RS09965 tryptophan synthase subunit beta low > 80
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.64 RR42_RS14360 tryptophan synthase subunit alpha low > 128
Dechlorosoma suillum PS 0.14 Dsui_0682 5,10-methenyltetrahydrofolate synthetase 0.65 Dsui_3192 tryptophan synthase, beta subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS00800 5-formyltetrahydrofolate cyclo-ligase 0.65 A4249_RS11330 tryptophan synthase subunit beta

Not shown: 0 genomes with orthologs for PP_5203 only; 40 genomes with orthologs for PP_0083 only