Conservation of cofitness between PFLU_RS21650 and PFLU_RS07630 in Pseudomonas fluorescens SBW25

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS21650 protein phosphatase CheZ 1.0 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.81 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS21650 protein phosphatase CheZ 1.00 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas simiae WCS417 0.97 PS417_19685 protein phosphatase 1.00 PS417_07550 lytic transglycosylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3628 Chemotaxis response - phosphatase CheZ 0.85 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_18795 protein phosphatase 0.83 AO353_00530 lytic transglycosylase low > 101
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_03720 protein phosphatase 0.86 AO356_02350 lytic transglycosylase low > 104
Pseudomonas sp. RS175 0.90 PFR28_00854 Protein phosphatase CheZ 0.86 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_2571 Chemotaxis response - phosphatase CheZ 0.86 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4329 Chemotaxis response - phosphatase CheZ 0.84 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_3435 chemotaxis phosphatase, CheZ 0.81 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_3435 chemotaxis phosphatase, CheZ 0.81 Psyr_3295 SLT low > 86
Pseudomonas putida KT2440 0.79 PP_4339 Protein phosphatase CheZ 0.83 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas sp. S08-1 0.75 OH686_02720 Chemotaxis response - phosphatase CheZ 0.75 OH686_21900 Soluble lytic murein transglycosylase low > 80
Pseudomonas stutzeri RCH2 0.61 Psest_1742 Chemotaxis protein 0.71 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Shewanella loihica PV-4 0.39 Shew_1385 chemotaxis phosphatase, CheZ (RefSeq) 0.22 Shew_2125 lytic transglycosylase, catalytic (RefSeq) low > 60
Shewanella oneidensis MR-1 0.38 SO3208 cheZ chemotaxis protein CheZ (NCBI ptt file) 0.23 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1361 chemotaxis phosphatase, CheZ (RefSeq) 0.24 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq)
Shewanella amazonensis SB2B 0.34 Sama_2278 putative chemotaxis phosphatase, CheZ (RefSeq) 0.22 Sama_1895 soluble lytic murein transglycosylase, putative (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.34 MIT1002_01105 chemotaxis regulator CheZ 0.22 MIT1002_00576 Soluble lytic murein transglycosylase precursor low > 70
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_10325 protein phosphatase CheZ 0.20 CSW01_03655 murein transglycosylase low > 62
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS18000 protein phosphatase CheZ 0.17 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.24 RS_RS03740 protein phosphatase CheZ 0.17 RS_RS00445 lytic transglycosylase low > 80
Ralstonia solanacearum PSI07 0.24 RPSI07_RS06220 protein phosphatase CheZ 0.17 RPSI07_RS23510 lytic transglycosylase low > 81
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS35775 chemotaxis protein CheZ 0.17 RR42_RS01405 lytic transglycosylase low > 128
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS17425 protein phosphatase CheZ 0.17 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum UW163 0.23 UW163_RS21725 protein phosphatase CheZ 0.17 UW163_RS03720 lytic transglycosylase
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS10135 chemotaxis protein CheZ 0.15 HSERO_RS21415 lytic transglycosylase low > 78
Variovorax sp. SCN45 0.21 GFF5769 Chemotaxis response - phosphatase CheZ 0.16 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS18960 chemotaxis protein CheZ 0.17 BPHYT_RS18610 lytic transglycosylase low > 109
Pantoea sp. MT58 0.21 IAI47_08340 protein phosphatase CheZ 0.21 IAI47_16260 murein transglycosylase low > 76
Dickeya dianthicola 67-19 0.20 HGI48_RS13560 protein phosphatase CheZ 0.21 HGI48_RS18385 murein transglycosylase low > 71
Dickeya dianthicola ME23 0.20 DZA65_RS14045 protein phosphatase CheZ 0.21 DZA65_RS19525 murein transglycosylase low > 75
Paraburkholderia graminis OAS925 0.20 ABIE53_000117 chemotaxis protein CheZ 0.17 ABIE53_000044 soluble lytic murein transglycosylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05749 chemotaxis protein CheZ 0.17 H281DRAFT_05816 soluble lytic murein transglycosylase low > 103
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS28975 protein phosphatase CheZ 0.18 QEN71_RS28635 lytic transglycosylase domain-containing protein low > 153
Dickeya dadantii 3937 0.20 DDA3937_RS13515 protein phosphatase CheZ 0.22 DDA3937_RS18455 murein transglycosylase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF1662 Chemotaxis response - phosphatase CheZ 0.22 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 78
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0675 Chemotaxis protein 0.22 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Enterobacter sp. TBS_079 0.19 MPMX20_02785 Protein phosphatase CheZ 0.22 MPMX20_00699 Soluble lytic murein transglycosylase low > 85
Rahnella sp. WP5 0.19 EX31_RS11350 protein phosphatase CheZ 0.21 EX31_RS03985 murein transglycosylase low > 89
Pectobacterium carotovorum WPP14 0.19 HER17_RS08130 protein phosphatase CheZ 0.21 HER17_RS02750 murein transglycosylase low > 75
Serratia liquefaciens MT49 0.19 IAI46_16005 protein phosphatase CheZ 0.22 IAI46_02985 murein transglycosylase low > 86
Escherichia coli ECRC100 0.19 OKFHMN_26160 cheZ protein phosphatase CheZ 0.23 OKFHMN_11170 sltY murein transglycosylase low > 80
Escherichia coli ECRC102 0.19 NIAGMN_01900 cheZ protein phosphatase CheZ 0.23 NIAGMN_09020 sltY murein transglycosylase
Escherichia coli ECRC101 0.19 MCAODC_19245 cheZ protein phosphatase CheZ 0.23 MCAODC_01685 sltY murein transglycosylase low > 87
Escherichia coli ECRC98 0.19 JDDGAC_00735 cheZ protein phosphatase CheZ 0.23 JDDGAC_14765 sltY murein transglycosylase low > 86
Escherichia coli ECRC99 0.19 KEDOAH_01945 cheZ protein phosphatase CheZ 0.23 KEDOAH_16985 sltY murein transglycosylase
Escherichia coli BW25113 0.19 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) 0.23 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Escherichia coli ECOR38 0.19 HEPCGN_04580 cheZ protein phosphatase CheZ 0.23 HEPCGN_09175 sltY murein transglycosylase low > 87
Escherichia coli ECOR27 0.19 NOLOHH_16600 cheZ protein phosphatase CheZ 0.23 NOLOHH_03500 sltY murein transglycosylase low > 75
Escherichia coli ECRC62 0.19 BNILDI_15390 cheZ protein phosphatase CheZ 0.23 BNILDI_08095 sltY murein transglycosylase low > 75
Escherichia coli BL21 0.19 ECD_01852 chemotaxis regulator, protein phosphatase for CheY 0.22 ECD_04268 lytic murein transglycosylase, soluble low > 61
Escherichia coli Nissle 1917 0.19 ECOLIN_RS10745 protein phosphatase CheZ 0.23 ECOLIN_RS25210 murein transglycosylase
Escherichia fergusonii Becca 0.19 EFB2_02062 Protein phosphatase CheZ 0.23 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_01847 Protein phosphatase CheZ 0.23 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Erwinia tracheiphila SCR3 0.18 LU632_RS13515 cheZ protein phosphatase CheZ 0.19 LU632_RS02575 sltY murein transglycosylase low > 74
Acidovorax sp. GW101-3H11 0.17 Ac3H11_1386 Chemotaxis response - phosphatase CheZ 0.16 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF1434 Chemotaxis response - phosphatase CheZ 0.17 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_02840 cheZ chemotaxis protein CheZ 0.19 OKGIIK_16395 Lytic transglycosylase
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.2834.1 Chemotaxis response - phosphatase CheZ 0.18 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS13590 protein phosphatase CheZ 0.20 LRK54_RS07245 transglycosylase SLT domain-containing protein
Rhodanobacter denitrificans MT42 0.14 LRK55_RS13330 protein phosphatase CheZ 0.20 LRK55_RS06980 transglycosylase SLT domain-containing protein
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS20275 protein phosphatase CheZ 0.21 ABZR86_RS12745 transglycosylase SLT domain-containing protein

Not shown: 1 genomes with orthologs for PFLU_RS21650 only; 6 genomes with orthologs for PFLU_RS07630 only