Conservation of cofitness between MCAODC_01435 and MCAODC_01605 in Escherichia coli ECRC101

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_01435 caiD crotonobetainyl-CoA hydratase 1.0 MCAODC_01605 yaaA peroxide stress protein YaaA 0.62 7
Escherichia coli ECRC100 1.00 OKFHMN_10920 caiD crotonobetainyl-CoA hydratase 1.00 OKFHMN_11090 yaaA peroxide stress protein YaaA low > 80
Escherichia coli ECRC102 1.00 NIAGMN_08770 caiD crotonobetainyl-CoA hydratase 1.00 NIAGMN_08940 yaaA peroxide stress protein YaaA — —
Escherichia coli ECRC98 1.00 JDDGAC_14515 caiD crotonobetainyl-CoA hydratase 0.99 JDDGAC_14685 yaaA peroxide stress protein YaaA low > 86
Escherichia coli BL21 1.00 ECD_00040 carnitinyl-CoA dehydratase 1.00 ECD_00006 peroxide resistance protein, lowers intracellular iron low > 61
Escherichia coli ECRC99 1.00 KEDOAH_17235 caiD crotonobetainyl-CoA hydratase 1.00 KEDOAH_17065 yaaA peroxide stress protein YaaA — —
Escherichia coli BW25113 0.99 b0036 caiD crotonobetainyl CoA hydratase (RefSeq) 0.99 b0006 yaaA hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_03255 caiD crotonobetainyl-CoA hydratase 0.99 NOLOHH_03420 yaaA peroxide stress protein YaaA low > 75
Escherichia fergusonii Becca 0.99 EFB2_04009 Carnitinyl-CoA dehydratase 1.00 EFB2_04037 Peroxide stress resistance protein YaaA low > 86
Escherichia coli ECOR38 0.99 HEPCGN_08910 caiD crotonobetainyl-CoA hydratase 1.00 HEPCGN_09095 yaaA peroxide stress protein YaaA low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00200 crotonobetainyl-CoA hydratase 1.00 ECOLIN_RS00035 peroxide stress protein YaaA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03620 Carnitinyl-CoA dehydratase 1.00 OHPLBJKB_03654 hypothetical protein low > 73
Escherichia coli ECRC62 0.99 BNILDI_08350 caiD crotonobetainyl-CoA hydratase 0.99 BNILDI_08185 yaaA peroxide stress protein YaaA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF210 Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) 0.87 GFF1081 UPF0246 protein YaaA low > 78
Shewanella loihica PV-4 0.85 Shew_2672 carnitinyl-CoA dehydratase (RefSeq) 0.64 Shew_1093 hypothetical protein (RefSeq) low > 60
Phaeobacter inhibens DSM 17395 0.52 PGA1_c34200 carnitinyl-CoA dehydratase CaiD 0.42 PGA1_c31890 Uncharacterized protein conserved in bacteria low > 62
Castellaniella sp019104865 MT123 0.33 ABCV34_RS09455 crotonase/enoyl-CoA hydratase family protein 0.47 ABCV34_RS01170 peroxide stress protein YaaA low > 48
Variovorax sp. SCN45 0.33 GFF2700 Enoyl-CoA hydratase (EC 4.2.1.17) 0.47 GFF6020 UPF0246 protein YaaA — —
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS15965 enoyl-CoA hydratase-related protein 0.58 QEN71_RS24000 peroxide stress protein YaaA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05516 enoyl-CoA hydratase 0.59 H281DRAFT_04599 hypothetical protein low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS14515 enoyl-CoA hydratase-related protein 0.45 A4249_RS06085 peroxide stress protein YaaA low > 48
Pseudomonas putida KT2440 0.29 PP_2217 enoyl-CoA hydratase 0.66 PP_1289 conserved protein of unknown function, DUF328 family low > 96
Enterobacter asburiae PDN3 0.28 EX28DRAFT_1415 Enoyl-CoA hydratase/carnithine racemase 0.87 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF1003 Enoyl-CoA hydratase (EC 4.2.1.17) 0.53 GFF720 UPF0246 protein YaaA low > 90
Klebsiella michiganensis M5al 0.28 BWI76_RS13115 2,3-dehydroadipyl-CoA hydratase 0.85 BWI76_RS04260 peroxide stress protein YaaA — —
Variovorax sp. OAS795 0.28 ABID97_RS28410 enoyl-CoA hydratase/isomerase family protein 0.48 ABID97_RS07905 peroxide stress protein YaaA — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_4069 Enoyl-CoA hydratase/carnithine racemase 0.46 Echvi_0335 Uncharacterized protein conserved in bacteria low > 79
Serratia liquefaciens MT49 0.27 IAI46_09100 enoyl-CoA hydratase/isomerase family protein 0.79 IAI46_03045 peroxide stress protein YaaA low > 86
Dinoroseobacter shibae DFL-12 0.27 Dshi_3370 Enoyl-CoA hydratase/isomerase (RefSeq) 0.44 Dshi_3333 protein of unknown function DUF328 (RefSeq) — —
Acinetobacter radioresistens SK82 0.27 MPMX26_01546 putative enoyl-CoA hydratase echA8 0.67 MPMX26_02017 Peroxide stress resistance protein YaaA — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2984 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.64 PfGW456L13_1686 UPF0246 protein YaaA low > 87
Paraburkholderia graminis OAS925 0.27 ABIE53_001912 enoyl-CoA hydratase/carnithine racemase 0.59 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) low > 113
Pseudomonas simiae WCS417 0.27 PS417_13845 enoyl-CoA hydratase 0.63 PS417_04850 hypothetical protein — —
Marinobacter adhaerens HP15 0.27 HP15_908 enoyl-CoA hydratase/isomerase 0.65 HP15_1223 protein YaaA low > 73
Pseudomonas sp. RS175 0.27 PFR28_01884 putative enoyl-CoA hydratase echA8 0.65 PFR28_03554 Peroxide stress resistance protein YaaA low > 88
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS18250 enoyl-CoA hydratase 0.55 RR42_RS05780 hypothetical protein low > 128
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4006 Enoyl-CoA hydratase (EC 4.2.1.17) 0.53 Ac3H11_1593 UPF0246 protein YaaA low > 79
Dechlorosoma suillum PS 0.27 Dsui_1378 enoyl-CoA hydratase/carnithine racemase 0.55 Dsui_2322 hypothetical protein low > 51
Ralstonia solanacearum PSI07 0.27 RPSI07_RS10800 enoyl-CoA hydratase 0.58 RPSI07_RS14595 peroxide stress protein YaaA low > 81
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_1147 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.65 Pf6N2E2_5389 UPF0246 protein YaaA low > 103
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_4788 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.65 Pf1N1B4_981 UPF0246 protein YaaA — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_26360 enoyl-CoA hydratase 0.66 AO356_17320 hypothetical protein low > 104
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00006 enoyl-CoA hydratase 0.45 CCNA_03496 hypothetical protein low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00006 enoyl-CoA hydratase 0.45 CCNA_03496 hypothetical protein low > 66
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS14775 enoyl-CoA hydratase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS14775 enoyl-CoA hydratase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas stutzeri RCH2 0.26 Psest_2437 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) (from data) 0.63 Psest_3173 Uncharacterized protein conserved in bacteria low > 67
Enterobacter sp. TBS_079 0.26 MPMX20_02147 2,3-dehydroadipyl-CoA hydratase 0.87 MPMX20_00714 Peroxide stress resistance protein YaaA low > 85
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_25675 enoyl-CoA hydratase 0.65 AO353_04675 hypothetical protein — —
Ralstonia solanacearum GMI1000 0.26 RS_RS14385 enoyl-CoA hydratase 0.59 RS_RS10095 peroxide stress protein YaaA low > 80
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS17335 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) (from data) 0.57 BPHYT_RS06780 hypothetical protein low > 109
Pseudomonas sp. S08-1 0.26 OH686_05875 Enoyl-CoA hydratase 0.62 OH686_07085 UPF0246 protein YaaA low > 80
Shewanella amazonensis SB2B 0.25 Sama_1378 enoyl-CoA hydratase (RefSeq) 0.62 Sama_0917 hypothetical protein (RefSeq) low > 62
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS06440 enoyl-CoA hydratase 0.58 RALBFv3_RS02720 peroxide stress protein YaaA 0.41 9
Ralstonia solanacearum UW163 0.25 UW163_RS07185 enoyl-CoA hydratase 0.58 UW163_RS11005 peroxide stress protein YaaA — —
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS02095 enoyl-CoA hydratase 0.59 ABZR87_RS14635 peroxide stress protein YaaA low > 80
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_3030 short chain enoyl-CoA hydratase 0.64 Psyr_1064 Protein of unknown function DUF328 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_3030 short chain enoyl-CoA hydratase 0.64 Psyr_1064 Protein of unknown function DUF328 low > 86
Shewanella sp. ANA-3 0.23 Shewana3_2768 enoyl-CoA hydratase (RefSeq) 0.57 Shewana3_3143 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.23 SO1680 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) low > 76
Rahnella sp. WP5 0.22 EX31_RS16680 enoyl-CoA hydratase 0.75 EX31_RS03930 peroxide stress protein YaaA low > 89
Alteromonas macleodii MIT1002 0.22 MIT1002_02567 Carnitinyl-CoA dehydratase 0.58 MIT1002_03077 hypothetical protein 0.87 18

Not shown: 21 genomes with orthologs for MCAODC_01435 only; 13 genomes with orthologs for MCAODC_01605 only