Conservation of cofitness between IAI47_12945 and IAI47_12950 in Pantoea sp. MT58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_12945 ATP-dependent Clp protease ATP-binding subunit ClpA 1.0 IAI47_12950 ATP-dependent Clp protease adapter ClpS 0.84 1
Rahnella sp. WP5 0.93 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA 0.84 EX31_RS18565 ATP-dependent Clp protease adapter ClpS low > 89
Erwinia tracheiphila SCR3 0.92 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.83 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS 0.75 44
Enterobacter sp. TBS_079 0.92 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA 0.87 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Serratia liquefaciens MT49 0.92 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA 0.84 IAI46_08510 ATP-dependent Clp protease adapter ClpS low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) 0.87 EX28DRAFT_2051 Uncharacterized conserved protein 0.78 12
Escherichia coli ECRC101 0.92 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECOR38 0.92 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS low > 85
Escherichia coli ECRC98 0.92 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia fergusonii Becca 0.92 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS low > 73
Escherichia coli BW25113 0.92 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) 0.86 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS04695 ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS low > 52
Escherichia coli ECRC102 0.92 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC62 0.92 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC101 0.92 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECOR27 0.92 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 57
Escherichia coli BL21 0.92 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 0.86 ECD_00886 regulatory protein for ClpA substrate specificity low > 60
Escherichia coli ECRC99 0.92 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA 0.86 GFF4902 ATP-dependent Clp protease adaptor protein ClpS low > 78
Pectobacterium carotovorum WPP14 0.91 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA 0.79 HER17_RS12405 ATP-dependent Clp protease adapter ClpS low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA 0.76 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS 0.71 52
Klebsiella michiganensis M5al 0.91 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA 0.82 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS 0.34 1
Dickeya dianthicola 67-19 0.91 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA 0.75 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS low > 71
Dickeya dianthicola ME23 0.91 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA 0.75 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS low > 75
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_05805 ATP-dependent Clp protease ATP-binding subunit ClpA 0.68 CSW01_05800 ATP-dependent Clp protease adaptor ClpS low > 62
Shewanella sp. ANA-3 0.71 Shewana3_1753 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) 0.59 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Shewanella amazonensis SB2B 0.70 Sama_2056 ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) 0.58 Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) 0.84 1
Shewanella oneidensis MR-1 0.70 SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) 0.59 SO2627 conserved hypothetical protein (NCBI ptt file) 0.79 10
Shewanella loihica PV-4 0.70 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) 0.59 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_01834 ATP-dependent Clp protease ATP-binding subunit ClpA 0.62 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS low > 70
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1505 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) 0.54 B158DRAFT_1504 Uncharacterized conserved protein 1.00 1
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein 0.48 HSERO_RS07025 ATP-dependent Clp protease ClpS — —
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA 0.54 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS low > 74
Lysobacter sp. OAE881 0.63 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA 0.53 ABIE51_RS11495 ATP-dependent Clp protease adapter ClpS 0.80 38
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA 0.50 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS 0.65 25
Ralstonia solanacearum GMI1000 0.62 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 RS_RS12375 ATP-dependent Clp protease adaptor ClpS — —
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_06890 clpA ATP-dependent Clp protease ATP-binding subunit ClpA 0.50 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS low > 52
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS 0.60 7
Dechlorosoma suillum PS 0.62 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA 0.50 Dsui_0008 hypothetical protein low > 51
Ralstonia solanacearum UW163 0.61 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS — —
Ralstonia solanacearum PSI07 0.61 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS low > 81
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS17105 Clp protease ClpX 0.51 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS 0.76 3
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS low > 153
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein 0.52 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS low > 109
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA 0.52 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS 0.35 57
Castellaniella sp019104865 MT123 0.60 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA 0.40 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS low > 48
Magnetospirillum magneticum AMB-1 0.60 AMB_RS05705 ATP-dependent Clp protease ATP-binding subunit ClpA 0.51 AMB_RS05700 ATP-dependent Clp protease adapter ClpS low > 64
Azospirillum brasilense Sp245 0.59 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein 0.49 AZOBR_RS05180 Clp protease ClpS low > 97
Azospirillum sp. SherDot2 0.59 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA 0.53 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS low > 112
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) 0.54 Ga0059261_1285 Uncharacterized conserved protein 0.53 9
Caulobacter crescentus NA1000 0.58 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA 0.47 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS 0.96 1
Caulobacter crescentus NA1000 Δfur 0.58 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA 0.47 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS low > 67
Rhodopseudomonas palustris CGA009 0.57 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA 0.50 TX73_016275 ATP-dependent Clp protease adapter ClpS 0.62 6
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU1602 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) 0.41 DVU1601 ATP-dependent Clp protease adaptor protein ClpS (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_0458 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) 0.43 DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 51
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS03345 AAA family ATPase 0.30 ABI39_RS03340 ATP-dependent Clp protease adaptor ClpS low > 72
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS09040 AAA family ATPase 0.30 HMPREF1058_RS09035 ATP-dependent Clp protease adaptor ClpS low > 67

Not shown: 30 genomes with orthologs for IAI47_12945 only; 1 genomes with orthologs for IAI47_12950 only