Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pantoea sp. MT58 | 1.0 | IAI47_15195 | | acyl-CoA dehydrogenase | 1.0 | IAI47_08785 | | L-serine ammonia-lyase | 0.45 | 13 |
Klebsiella michiganensis M5al | 0.84 | BWI76_RS05470 | | acyl-CoA dehydrogenase | 0.85 | BWI76_RS17875 | | L-serine ammonia-lyase | low | > 92 |
Escherichia coli ECRC62 | 0.83 | BNILDI_00350 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | BNILDI_15855 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli BW25113 | 0.83 | b0221 | yafH | putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) | 0.85 | b1814 | sdaA | L-serine deaminase I (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03418 | | Acyl-coenzyme A dehydrogenase | 0.85 | OHPLBJKB_01917 | | L-serine dehydratase 1 | low | > 73 |
Escherichia coli ECOR38 | 0.83 | HEPCGN_07885 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | HEPCGN_04940 | sdaA | L-serine ammonia-lyase | low | > 85 |
Escherichia fergusonii Becca | 0.83 | EFB2_03796 | | Acyl-coenzyme A dehydrogenase | 0.85 | EFB2_02186 | | L-serine dehydratase 1 | low | > 86 |
Escherichia coli ECOR27 | 0.83 | NOLOHH_02155 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | NOLOHH_17070 | sdaA | L-serine ammonia-lyase | low | > 57 |
Escherichia coli BL21 | 0.83 | ECD_00216 | | acyl coenzyme A dehydrogenase | 0.85 | ECD_01784 | | L-serine dehydratase 1 | low | > 60 |
Escherichia coli ECRC99 | 0.83 | KEDOAH_18375 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | KEDOAH_01560 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC98 | 0.83 | JDDGAC_13405 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | JDDGAC_01125 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC101 | 0.83 | OKFHMN_09780 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | OKFHMN_26550 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC101 | 0.83 | MCAODC_00300 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | MCAODC_18860 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli ECRC102 | 0.83 | NIAGMN_07640 | fadE | acyl-CoA dehydrogenase FadE | 0.85 | NIAGMN_01515 | sdaA | L-serine ammonia-lyase | — | — |
Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS01745 | | acyl-CoA dehydrogenase FadE | 0.85 | ECOLIN_RS10090 | | L-serine ammonia-lyase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.82 | GFF4100 | | Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 0.79 | GFF2828 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 78 |
Enterobacter asburiae PDN3 | 0.81 | EX28DRAFT_2668 | | Acyl-CoA dehydrogenases | 0.85 | EX28DRAFT_0745 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 76 |
Enterobacter sp. TBS_079 | 0.81 | MPMX20_00910 | | Acyl-coenzyme A dehydrogenase | 0.86 | MPMX20_02719 | | L-serine dehydratase 1 | low | > 85 |
Serratia liquefaciens MT49 | 0.81 | IAI46_04335 | | acyl-CoA dehydrogenase | 0.86 | IAI46_14795 | | L-serine ammonia-lyase | low | > 86 |
Rahnella sp. WP5 | 0.77 | EX31_RS21025 | | acyl-CoA dehydrogenase | 0.84 | EX31_RS24715 | | L-serine ammonia-lyase | low | > 89 |
Pectobacterium carotovorum WPP14 | 0.77 | HER17_RS04640 | | acyl-CoA dehydrogenase FadE | 0.86 | HER17_RS11315 | | L-serine ammonia-lyase | low | > 75 |
Dickeya dianthicola ME23 | 0.74 | DZA65_RS17755 | | acyl-CoA dehydrogenase | 0.82 | DZA65_RS11645 | | L-serine ammonia-lyase | low | > 75 |
Dickeya dadantii 3937 | 0.74 | DDA3937_RS16595 | | acyl-CoA dehydrogenase FadE | 0.82 | DDA3937_RS11265 | | L-serine ammonia-lyase | low | > 74 |
Dickeya dianthicola 67-19 | 0.74 | HGI48_RS16665 | | acyl-CoA dehydrogenase FadE | 0.82 | HGI48_RS11300 | | L-serine ammonia-lyase | low | > 71 |
Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_11370 | | acyl-CoA dehydrogenase | 0.75 | CSW01_06565 | | L-serine ammonia-lyase | low | > 62 |
Shewanella sp. ANA-3 | 0.63 | Shewana3_2323 | fadE | acyl-CoA dehydrogenase (RefSeq) | 0.55 | Shewana3_2295 | | L-serine ammonia-lyase (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.63 | Shew_2108 | fadE | acyl-CoA dehydrogenase (RefSeq) | 0.69 | Shew_0740 | | L-serine dehydratase 1 (RefSeq) | low | > 60 |
Shewanella oneidensis MR-1 | 0.63 | SO2536 | | oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) | 0.55 | SO2248 | sdaA | L-serine dehydratase 1 (NCBI ptt file) | low | > 76 |
Alteromonas macleodii MIT1002 | 0.61 | MIT1002_02222 | | Acyl-coenzyme A dehydrogenase | 0.56 | MIT1002_02006 | | L-serine dehydratase 1 | low | > 70 |
Shewanella amazonensis SB2B | 0.61 | Sama_1870 | fadE | acyl-CoA dehydrogenase (RefSeq) | 0.64 | Sama_2771 | | L-serine ammonia-lyase (RefSeq) | low | > 62 |
Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_1781 | | Acyl-CoA dehydrogenases | 0.54 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 40 |
Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS18970 | | acyl-CoA dehydrogenase | 0.51 | ABZR86_RS19060 | | L-serine ammonia-lyase | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_01400 | fadE | acyl-CoA dehydrogenase | 0.50 | OKGIIK_01565 | sdaA | L-serine ammonia-lyase | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS05405 | | acyl-CoA dehydrogenase | 0.51 | LRK54_RS05255 | | L-serine ammonia-lyase | low | > 59 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_1628 | | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_1628 | | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | low | > 86 |
Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.1577.1 | | Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 0.53 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 74 |
Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS05180 | | acyl-CoA dehydrogenase | 0.51 | LRK55_RS05035 | | L-serine ammonia-lyase | low | > 63 |
Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS08290 | | acyl-CoA dehydrogenase | 0.50 | BPHYT_RS19340 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 109 |
Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_05133 | | acyl-CoA dehydrogenase | 0.50 | H281DRAFT_02407 | | L-serine ammonia-lyase | low | > 103 |
Pseudomonas putida KT2440 | 0.48 | PP_1893 | | medium-long chain acyl-CoA dehydrogenase | 0.50 | PP_0987 | | L-serine dehydratase | low | > 96 |
Pseudomonas sp. RS175 | 0.48 | PFR28_03037 | | Acyl-coenzyme A dehydrogenase | 0.53 | PFR28_03384 | | L-serine dehydratase 2 | low | > 88 |
Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_01500 | | acyl-CoA dehydrogenase | 0.53 | AO353_03505 | | serine dehydratase | low | > 101 |
Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS22955 | | acyl-CoA dehydrogenase | 0.50 | QEN71_RS29225 | | L-serine ammonia-lyase | low | > 153 |
Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS07825 | | acyl-CoA dehydrogenase | 0.50 | ABZR87_RS03940 | | L-serine ammonia-lyase | low | > 80 |
Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_5924 | | Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 0.52 | Pf6N2E2_5557 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 103 |
Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS09195 | | acyl-CoA dehydrogenase | 0.52 | PFLU_RS24005 | | L-serine ammonia-lyase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS09195 | | acyl-CoA dehydrogenase | 0.52 | PFLU_RS24005 | | L-serine ammonia-lyase | low | > 109 |
Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_2077 | | Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 0.53 | PfGW456L13_1867 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS21335 | | acyl-CoA dehydrogenase | 0.52 | RPSI07_RS08570 | | L-serine ammonia-lyase | low | > 81 |
Pseudomonas simiae WCS417 | 0.47 | PS417_09185 | | acyl-CoA dehydrogenase | 0.52 | PS417_22365 | | serine dehydratase | low | > 88 |
Pseudomonas stutzeri RCH2 | 0.47 | Psest_2728 | | Acyl-CoA dehydrogenases | 0.51 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 67 |
Ralstonia solanacearum GMI1000 | 0.47 | RS_RS02685 | | acyl-CoA dehydrogenase | 0.50 | RS_RS16515 | | L-serine ammonia-lyase | low | > 80 |
Lysobacter sp. OAE881 | 0.46 | ABIE51_RS16325 | | acyl-CoA dehydrogenase | 0.50 | ABIE51_RS16145 | | L-serine ammonia-lyase | low | > 62 |
Paraburkholderia graminis OAS925 | 0.46 | ABIE53_002416 | | acyl-CoA dehydrogenase | 0.50 | ABIE53_000240 | | L-serine dehydratase | low | > 113 |
Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_20030 | | acyl-CoA dehydrogenase | 0.53 | AO356_18165 | | serine dehydratase | low | > 104 |
Pseudomonas sp. S08-1 | 0.46 | OH686_22645 | | Acyl-CoA dehydrogenase | 0.52 | OH686_16810 | | L-serine ammonia-lyase | low | > 80 |
Ralstonia solanacearum UW163 | 0.46 | UW163_RS01725 | | acyl-CoA dehydrogenase | 0.50 | UW163_RS04945 | | L-serine ammonia-lyase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS11865 | | acyl-CoA dehydrogenase | 0.50 | RALBFv3_RS08665 | | L-serine ammonia-lyase | low | > 76 |
Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_480 | | Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 0.53 | Pf1N1B4_622 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
Castellaniella sp019104865 MT123 | 0.43 | ABCV34_RS04935 | | acyl-CoA dehydrogenase | 0.46 | ABCV34_RS14845 | | L-serine ammonia-lyase | low | > 48 |
Not shown: 4 genomes with orthologs for IAI47_15195 only; 24 genomes with orthologs for IAI47_08785 only